Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0692
         (725 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1424 + 26982502-26983572,26984129-26984908,26988299-26990128     31   0.70 
08_02_1426 + 27009720-27010787,27011846-27012517,27012999-270137...    31   1.2  
06_03_0733 + 23976835-23976906,23977076-23977279,23977388-239776...    29   3.8  
05_01_0080 - 535443-535481,535569-535698,536483-536586,536686-53...    28   6.6  
09_06_0041 - 20440266-20441381                                         28   8.7  

>08_02_1424 + 26982502-26983572,26984129-26984908,26988299-26990128
          Length = 1226

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = +2

Query: 578  SFGNSFLIDTLDYSGLWTTAFPEATIERETFHNDEGVPLGTVD 706
            SFGN   ++TLD  G W T  P ATI R    N + V  G++D
Sbjct: 894  SFGNLLNLETLDIRGTWVTKLP-ATIGR--LQNLKYVHAGSLD 933


>08_02_1426 + 27009720-27010787,27011846-27012517,27012999-27013793,
            27014914-27014943,27018095-27019987
          Length = 1485

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +2

Query: 578  SFGNSFLIDTLDYSGLWTTAFPEATIER 661
            SFGN   ++TLD  G W T  P ATI R
Sbjct: 1145 SFGNLLNLETLDIRGTWVTKLP-ATIGR 1171


>06_03_0733 +
           23976835-23976906,23977076-23977279,23977388-23977645,
           23978002-23978217,23978324-23978479,23978556-23978867,
           23978957-23979044,23979224-23979372,23979465-23979755
          Length = 581

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 298 FGSPPSPSAANDSQMIMGPRQNG 230
           FGS PSP+    S+   GPR NG
Sbjct: 502 FGSKPSPARPQSSRKAPGPRANG 524


>05_01_0080 -
           535443-535481,535569-535698,536483-536586,536686-536903,
           537755-537762,538146-538183,538475-538668,539168-539296,
           539392-539481,539726-539839,540008-540154,540228-540293,
           540876-540987
          Length = 462

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 625 LDHSVSRSHNRKRNFP*RRGSTA 693
           LD S+S+S N+ RN P +RG+ A
Sbjct: 253 LDKSLSQSKNKGRNLPSKRGAAA 275


>09_06_0041 - 20440266-20441381
          Length = 371

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -1

Query: 725 FSLHASCQLYRAVLP 681
           FSL ASC+ YRA+LP
Sbjct: 57  FSLRASCRAYRALLP 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,196,682
Number of Sequences: 37544
Number of extensions: 478963
Number of successful extensions: 1439
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)