BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0692 (725 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_14215| Best HMM Match : ZF-HD_dimer (HMM E-Value=1.5) 30 1.7 SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2 SB_37108| Best HMM Match : AMP-binding (HMM E-Value=2e-09) 29 5.1 SB_6542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1 SB_23855| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1 SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9 SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 28 8.9 SB_4860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9 SB_49137| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9 SB_25000| Best HMM Match : 7tm_1 (HMM E-Value=1.49995e-41) 28 8.9 >SB_14215| Best HMM Match : ZF-HD_dimer (HMM E-Value=1.5) Length = 738 Score = 30.3 bits (65), Expect = 1.7 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +3 Query: 360 YYQIANSLATPGTDVHLTTTRALILDNNLIINPDWSKFVHTAK 488 YY A + G + L TT I DN LI+NPD +H A+ Sbjct: 472 YYLFAADGSAHGLSIKLRTTLKRIADN-LILNPDADPSLHAAE 513 >SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3160 Score = 29.9 bits (64), Expect = 2.2 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = -2 Query: 313 SSFCDFGSPPSPSAANDSQMIMGPRQNGSCCSDRRPCTNAMKTLRGLP 170 S C + P PS + Q GP + S + PC NA K R P Sbjct: 2147 SQDCSQCNTPVPSICSAPQQASGPNSDTSTEDRQSPCENAAKVARVSP 2194 >SB_37108| Best HMM Match : AMP-binding (HMM E-Value=2e-09) Length = 488 Score = 28.7 bits (61), Expect = 5.1 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +3 Query: 192 IAFVQGRRSEQQLPFCRGPIIIWLSLAALGEGGDPKSQKELFEV 323 +++ +G + + PF RG I+I S LG +P+ +E FEV Sbjct: 278 VSWEEGGYTIRDKPFARGEIVIGGSNVTLGYYKNPQKTQEDFEV 321 >SB_6542| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 195 Score = 28.7 bits (61), Expect = 5.1 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -3 Query: 513 IGLALYAVVLLCEQTWTNPGLLLDCYPKSRRVSWSNGRQFPAWPD 379 I L L +V E++W + L+C+ S +S S Q+ WPD Sbjct: 14 IPLLLVQLVRAAEESWDTAAIELNCH--SSHMSLSINLQYLQWPD 56 >SB_23855| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 435 Score = 28.7 bits (61), Expect = 5.1 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 556 RNNAR*GIFREFVPDRHFGLQRPLDHSVSRSHNRKRNF 669 R+ AR +F F P +++ R SV ++NRKRNF Sbjct: 373 RDEAR-ALFHRFFPKKNYNNSRLRLTSVPSTNNRKRNF 409 >SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1441 Score = 27.9 bits (59), Expect = 8.9 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 283 SPSAANDSQMIMGPRQNGSCCSDRRPCTN-AMKTLRGLP*TSDSDLHCRCLEELNCQRHV 107 +P+AA+ S SCC + T+ + +LRG T + + C C L+ H+ Sbjct: 106 NPAAASSSLQSQRVSYAPSCCRSAKNATSRSAHSLRGKAETCEFEAGCECGRNLDYTDHI 165 >SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) Length = 876 Score = 27.9 bits (59), Expect = 8.9 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +2 Query: 641 PEATIERETFHNDEGVPLGTVDMMRAK 721 P+A I R F G P+GTV MR + Sbjct: 846 PQAGIPRSQFRGARGSPIGTVQGMRGR 872 >SB_4860| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 98 Score = 27.9 bits (59), Expect = 8.9 Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 167 SREPSQS-FHRVCTGSPVRAATSILSWPHYHLAVISSTRR 283 +++P+++ FHRVCT + R A+S P++ + +++ R Sbjct: 13 AKQPARATFHRVCTETTRREASSEKGKPYHPVCAVTNPAR 52 >SB_49137| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 323 Score = 27.9 bits (59), Expect = 8.9 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Frame = +1 Query: 271 QHSEKEETRSRKRNYSK--FSIYLPKHVNAKGITKLRIVWP 387 +H++ E + RK+ K S++LPK + ITK IV P Sbjct: 149 EHAKDEADKQRKKEARKGVHSMWLPKRKDTLPITKATIVQP 189 >SB_25000| Best HMM Match : 7tm_1 (HMM E-Value=1.49995e-41) Length = 361 Score = 27.9 bits (59), Expect = 8.9 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = -2 Query: 586 PERFLILRYFSLLNRIFVVC*MFLYWARTIC 494 PE I+ Y+++LN+IFV+C ++L + + C Sbjct: 285 PEPQGIVEYYTVLNKIFVLC-LWLVFFNSAC 314 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,413,711 Number of Sequences: 59808 Number of extensions: 551639 Number of successful extensions: 1617 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1472 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1617 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1937927537 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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