Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0692
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 33 0.27
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 33 0.27
Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical pr... 31 0.84
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 29 3.4
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF125952-7|AAD14695.1| 352|Caenorhabditis elegans Seven tm rece... 28 5.9
AC090999-25|AAK26157.2| 921|Caenorhabditis elegans Hypothetical... 28 5.9
AC006722-13|AAK68415.2| 352|Caenorhabditis elegans Hypothetical... 28 5.9
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 32.7 bits (71), Expect = 0.27
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = +1
Query: 64 ASEAQSLIGNLVQGSH---VFGNLIPPNICNEDQSQKFK--GALAEFSSRLYRVAGQSSN 228
ASE G+ +G+ +F I P + NED S F G +A+ + R G+S
Sbjct: 12 ASETIKENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRG 71
Query: 229 FHFVVAPLSSGCH*QHSEKEET 294
F FV GC + +E+T
Sbjct: 72 FAFVEFTTGEGCKLALAAREQT 93
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 32.7 bits (71), Expect = 0.27
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = +1
Query: 64 ASEAQSLIGNLVQGSH---VFGNLIPPNICNEDQSQKFK--GALAEFSSRLYRVAGQSSN 228
ASE G+ +G+ +F I P + NED S F G +A+ + R G+S
Sbjct: 12 ASETIKENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRG 71
Query: 229 FHFVVAPLSSGCH*QHSEKEET 294
F FV GC + +E+T
Sbjct: 72 FAFVEFTTGEGCKLALAAREQT 93
>Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical
protein F02H6.1 protein.
Length = 537
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 327 NLPAEACKRERYYQIANSLATPGTDVHLTTTRALI 431
N+P E R + Q+AN L +P DV L R LI
Sbjct: 357 NIPIERQYRTEFIQLANDLQSPPDDVRLDVFRRLI 391
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 434 G*QSNNKPGLVQVCSHSKTTAYSASPIKKHLTDHENPIEKR-EITQDEESFGN 589
G ++NN+ +V + + T Y+ SP++ L EN ++K ++ D+ F N
Sbjct: 789 GVETNNE----EVMARQEMTVYAKSPVEAELEARENMLKKMIDVVSDQSDFWN 837
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +2
Query: 500 SASPIKKHLTDHENPIEKREITQDEESFGNSFLIDTLDYSGLWTTAFPEATIERETFHND 679
S IK+ + + ++K Q E FG+ L D + T AT++R + N+
Sbjct: 1223 SGKEIKQLIRHDQGAVQKAAPLQSMEDFGDEILAHAADSVNIQTPPEVVATVQRVSITNE 1282
Query: 680 E 682
+
Sbjct: 1283 Q 1283
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +2
Query: 500 SASPIKKHLTDHENPIEKREITQDEESFGNSFLIDTLDYSGLWTTAFPEATIERETFHND 679
S IK+ + + ++K Q E FG+ L D + T AT++R + N+
Sbjct: 1349 SGKEIKQLIRHDQGAVQKAAPLQSMEDFGDEILAHAADSVNIQTPPEVVATVQRVSITNE 1408
Query: 680 E 682
+
Sbjct: 1409 Q 1409
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +2
Query: 500 SASPIKKHLTDHENPIEKREITQDEESFGNSFLIDTLDYSGLWTTAFPEATIERETFHND 679
S IK+ + + ++K Q E FG+ L D + T AT++R + N+
Sbjct: 1223 SGKEIKQLIRHDQGAVQKAAPLQSMEDFGDEILAHAADSVNIQTPPEVVATVQRVSITNE 1282
Query: 680 E 682
+
Sbjct: 1283 Q 1283
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +2
Query: 500 SASPIKKHLTDHENPIEKREITQDEESFGNSFLIDTLDYSGLWTTAFPEATIERETFHND 679
S IK+ + + ++K Q E FG+ L D + T AT++R + N+
Sbjct: 1349 SGKEIKQLIRHDQGAVQKAAPLQSMEDFGDEILAHAADSVNIQTPPEVVATVQRVSITNE 1408
Query: 680 E 682
+
Sbjct: 1409 Q 1409
>AF125952-7|AAD14695.1| 352|Caenorhabditis elegans Seven tm
receptor protein 258 protein.
Length = 352
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -3
Query: 582 KDSSSCVISLFSIGFSWSVRCFFIGLALYAVV 487
K + SC+I++ IGFS S+ FF GL Y V+
Sbjct: 201 KAARSCLIAMGLIGFSNSIMVFF-GLKAYLVM 231
>AC090999-25|AAK26157.2| 921|Caenorhabditis elegans Hypothetical
protein Y82E9BR.18 protein.
Length = 921
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 316 SKFSIYLPKHVNAKGITKLRIV 381
S FS+ L KH+N K +T +R+V
Sbjct: 71 SSFSMKLRKHINQKRLTSIRVV 92
>AC006722-13|AAK68415.2| 352|Caenorhabditis elegans Hypothetical
protein Y19D10A.2 protein.
Length = 352
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -3
Query: 582 KDSSSCVISLFSIGFSWSVRCFFIGLALYAVV 487
K + SC+I++ IGFS S+ FF GL Y V+
Sbjct: 201 KAARSCLIAMGLIGFSNSIMVFF-GLKAYLVM 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,961,203
Number of Sequences: 27780
Number of extensions: 410624
Number of successful extensions: 1386
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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