Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0692
(725 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 28 0.10
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 24 1.7
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 24 1.7
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 3.9
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 3.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 3.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 5.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 5.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 5.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 5.1
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 5.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 5.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 5.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.1
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 5.1
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 6.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 6.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 6.8
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 21 9.0
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 9.0
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 27.9 bits (59), Expect = 0.10
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = -3
Query: 714 RIMSTVPSGTPSSLWKVSLSIVAS--GNAVVQRPL*SKVSIRNEFPKDSSSCVISLFSIG 541
R + + P+ + V+ S++ S G + L SKVS R E +D ++ ++SL
Sbjct: 328 RYLQELHVDAPTWISSVTESVLKSKIGQVFLITILDSKVSARIEMNEDDNTSLVSLDKKQ 387
Query: 540 FSWSVRCFFIGLALYAVVLL 481
++W IG + + + L
Sbjct: 388 YTWRHTSVLIGWSAFLCISL 407
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.8 bits (49), Expect = 1.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 420 VSWSNGRQFPAWPDYSQFGNTFRVYMLRQVN*ELRIVPFATSG 292
+++SNG FP P +S F Y+ +N E RI SG
Sbjct: 299 MTYSNGLPFPQRPIWSNFPIYKYKYIREIMNKESRISAAIDSG 341
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 23.8 bits (49), Expect = 1.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 420 VSWSNGRQFPAWPDYSQFGNTFRVYMLRQVN*ELRIVPFATSG 292
+++SNG FP P +S F Y+ +N E RI SG
Sbjct: 299 MTYSNGLPFPQRPIWSNFPIYKYKYIREIMNKESRISAAIDSG 341
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRQYEKLHNEKEKFLEERTSRKRYS 40
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRQYEKLHNEKEKFLEERTSRKRYS 40
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRQYEKLHNEKEKFLEERTSRKRYS 40
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRQYEKLHNEKEKFLEERTSRKRYS 40
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRQYEKLHNEKEKFLEERTSRKRYS 40
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRQYEKLHNEKEKFLEERTSRKRYS 40
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRQYEKLHNEKEKFLEERTSRKRYS 40
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRQYEKLHNEKEKFLEERTSRKRYS 40
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRQYEKLHNEKEKFLEERTSRKRYS 40
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRQYEKLHNEKEKFLEERTSRKRYS 40
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 498 YAVVLLCEQTWTNPGLLLDCY 436
+AV +L +W+ PG + D Y
Sbjct: 242 FAVYVLVNGSWSLPGFVCDFY 262
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 246 RKKDRQYEKLHNEKEKFLEERTSRKRYS 273
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 246 RKKDRQYEKLHNEKEKFLEERTSRKRYS 273
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRRYEKLHNEKEKFLEERTSRKRYS 40
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRRYEKLHNEKEKFLEERTSRKRYS 40
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRRYEKLHNEKEKFLEERTSRKRYS 40
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRRYEKLHNEKEKFLEERTSRKRYS 40
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRRYEKLHNEKEKFLEERTSRKRYS 40
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 13 RKKDRRYEKLHNEKEKFLEERTSRKRYS 40
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 619 RPLDHSVSRSHNRKRNFP*RRGSTARYS 702
R D + HN K F R S RYS
Sbjct: 246 RKKDRQYEKLHNEKEKFLEERTSHKRYS 273
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 295 GSPPSPSAANDSQMIMGP 242
G P +P + N SQM++ P
Sbjct: 50 GPPGAPPSQNPSQMMISP 67
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/14 (57%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
Frame = +1
Query: 106 SH-VFGNLIPPNIC 144
SH + GNL+PP +C
Sbjct: 358 SHPLHGNLLPPGVC 371
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 530 LLDVSLLGSHYMQ*FCCVNKLGPIRVYY*IVIQNQ 426
+LD L+ HY++ + ++ + I + Y +I NQ
Sbjct: 154 ILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQ 188
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 530 LLDVSLLGSHYMQ*FCCVNKLGPIRVYY*IVIQNQ 426
+LD L+ HY++ + ++ + I + Y +I NQ
Sbjct: 154 ILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQ 188
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 530 LLDVSLLGSHYMQ*FCCVNKLGPIRVYY*IVIQNQ 426
+LD L+ HY++ + ++ + I + Y +I NQ
Sbjct: 154 ILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQ 188
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 443 SNNKPGLVQVCSHSKTTA 496
S+ PG +Q C+ S TA
Sbjct: 20 SSANPGTIQACTTSPATA 37
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.4 bits (43), Expect = 9.0
Identities = 13/54 (24%), Positives = 24/54 (44%)
Frame = +3
Query: 276 LGEGGDPKSQKELFEVLNLPAEACKRERYYQIANSLATPGTDVHLTTTRALILD 437
LG GG K L++ + A+ + E+Y + NS H + L+++
Sbjct: 73 LGSGGFGIVYKALYKGEQVAAKIIQTEKYSNMLNSEKHASFLKHSNIVKVLMIE 126
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,473
Number of Sequences: 438
Number of extensions: 4880
Number of successful extensions: 32
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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