Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0690
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0140 - 23073032-23073130,23073270-23073338,23073448-230735... 34 0.085
05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784 33 0.15
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 33 0.26
12_01_0298 - 2250517-2251235,2251331-2251577,2251615-2252951,225... 31 1.0
12_01_0872 + 8326873-8327475,8328246-8328575 30 1.8
02_05_0464 - 29256887-29257765,29258455-29258538 30 1.8
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287... 30 1.8
01_01_0070 - 542603-542686,542803-543441 29 2.4
01_06_0640 + 30779457-30779623,30779707-30779828,30779959-307800... 29 3.2
11_03_0010 - 8922361-8922375,8923888-8924610 29 4.2
08_02_0134 - 13021294-13021350,13021478-13021658,13022383-130224... 29 4.2
07_01_0636 + 4761858-4762421,4763596-4763819,4763961-4764309,476... 29 4.2
04_04_0462 + 25393733-25394347 29 4.2
02_02_0349 + 9237537-9238334 29 4.2
09_01_0013 - 355103-355435 28 5.6
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57... 28 5.6
06_03_0332 + 19652207-19652995 28 5.6
05_03_0215 + 10347431-10348831 28 5.6
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 28 5.6
02_05_0683 + 30877731-30878243 28 5.6
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 28 7.4
01_01_0012 + 71903-72935,73468-73981,74619-76008 28 7.4
12_01_0423 + 3337401-3337419,3337777-3338235,3338650-3338735,333... 27 9.7
06_03_1149 + 28018932-28020529,28020989-28021067 27 9.7
06_03_0089 - 16475677-16476309 27 9.7
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 27 9.7
01_07_0198 - 41918276-41918408,41918486-41918841,41919091-419192... 27 9.7
01_05_0164 + 18827390-18827710 27 9.7
01_03_0224 + 13940419-13941786 27 9.7
>04_04_0140 -
23073032-23073130,23073270-23073338,23073448-23073539,
23073637-23074550,23074646-23074779,23075003-23075058,
23077556-23077646
Length = 484
Score = 34.3 bits (75), Expect = 0.085
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 228 HRAALRSTNARTFGVRVVSCGEGFVDPRRAVWWAARLHPI 109
HR+ L + V GEG +PRRA WW A H +
Sbjct: 35 HRSDLSMVTSSVLPKVVDDAGEGEANPRRAKWWYATFHSV 74
>05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784
Length = 394
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +2
Query: 371 PGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRP 493
P PA S A + AT SPR A +PPW T PP I P
Sbjct: 91 PMPTPAASSA-LAPATSSPRPASPPTPPWTTAPPPGIAAPP 130
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 425 PRLAPARSPPWGTTSPPRITRRPCPTD 505
P++ P SPP T SPP IT P P D
Sbjct: 616 PKITPYPSPPEVTPSPPEITPYPSPPD 642
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 425 PRLAPARSPPWGTTSPPRITRRPCPTD 505
P + P SPP T SPP IT P P +
Sbjct: 584 PEITPYPSPPEITPSPPEITPYPSPPE 610
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 425 PRLAPARSPPWGTTSPPRITRRPCPTD 505
P +AP SPP SPP IT P P +
Sbjct: 444 PEIAPYPSPPEIVPSPPEITPYPSPPE 470
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 425 PRLAPARSPPWGTTSPPRITRRPCPTD 505
P + P SPP SPP+IT P P +
Sbjct: 600 PEITPYPSPPEVVPSPPKITPYPSPPE 626
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 425 PRLAPARSPPWGTTSPPRITRRPCPTD 505
P + P SPP T PP IT P P +
Sbjct: 568 PEITPYPSPPEVTPGPPEITPYPSPPE 594
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 371 PGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCPTD 505
P +NP S I + P + P SPP SPP IT P P +
Sbjct: 492 PEINPYPSPPEIVPSP--PEITPYPSPPEIVPSPPEITPYPSPPE 534
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 425 PRLAPARSPPWGTTSPPRITRRPCPTD 505
P + P SPP SPP IT P P +
Sbjct: 460 PEITPYPSPPEIVPSPPEITPYPSPPE 486
>12_01_0298 -
2250517-2251235,2251331-2251577,2251615-2252951,
2256029-2256188
Length = 820
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +1
Query: 79 EEDGTMCSSGDWMQPRRPPNCSARVDEAFPTADHSHSKGSRVRGAQRCSVPAGARARVRG 258
++DG M G +QP RP + R D+ +D + SK +RG +R G R R R
Sbjct: 417 DDDGGMFGQGKGVQPGRPGSAGMRSDDG-GDSDGARSKLVSLRGGRR----RGRRRRRRR 471
Query: 259 SETEAR 276
+ + R
Sbjct: 472 RQRQQR 477
>12_01_0872 + 8326873-8327475,8328246-8328575
Length = 310
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = -2
Query: 258 AAHTCTCSGWHRAALRSTNARTFGVRVVSCGEGFVDPRRAVWWAARLHPIAT*AHCAVFL 79
AA CS W S N +T + SC GF+D + W L+PI A FL
Sbjct: 233 AATNVDCSRW------SNNQQTLCFQCDSCKAGFLDDIKKAWSFDALYPIL--ALVGAFL 284
Query: 78 T*SSGMAY 55
+ +G+ Y
Sbjct: 285 SCFAGVKY 292
>02_05_0464 - 29256887-29257765,29258455-29258538
Length = 320
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = -2
Query: 501 VGHGLLVIRGGDVVPQGGLLA---GASRGDHVALPIGA 397
+G G++ I GG V L A A GDH+ALP GA
Sbjct: 220 MGAGMMGIGGGGVAEYHALSALRFAAGLGDHLALPFGA 257
>01_06_1315 +
36226262-36226533,36227946-36228060,36228710-36228752,
36229953-36230329,36230330-36230481,36230591-36230838,
36230919-36231047,36231130-36231739,36231842-36232086,
36232195-36232325
Length = 773
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +2
Query: 347 PGQTRQTLPGLNPARSYAPIGRATWSPRLA---PARSPPWGTTSPPRITRRPC 496
P T + + L P A G W+ +A PA PP +SPP + PC
Sbjct: 170 PSATTKPVQKLRPGSRTAWAGHPKWALPVAYEMPAPPPPHAASSPPLPSSSPC 222
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 365 TLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCP 499
T P +P P AT +P +APA++PP P P P
Sbjct: 43 TAPAKSPPAPATPAPTATPTPPVAPAKAPPVAPAVAPVTPPPPTP 87
>01_06_0640 +
30779457-30779623,30779707-30779828,30779959-30780014,
30780147-30780254
Length = 150
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +2
Query: 350 GQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRR 490
G R+ L GL A S + +P A ARSP S PR TRR
Sbjct: 6 GGARRALAGLRSASSSRAFSQP--APAAAAARSPELAAFSLPRSTRR 50
>11_03_0010 - 8922361-8922375,8923888-8924610
Length = 245
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -2
Query: 450 GLLAG--ASRGDHVALPIGAY-ERAGFNPGNVC 361
G AG A D A IGAY AG+NPG +C
Sbjct: 61 GAAAGMAADAADSAAANIGAYIPEAGYNPGKLC 93
>08_02_0134 -
13021294-13021350,13021478-13021658,13022383-13022433,
13025134-13025187,13026154-13026248,13026565-13026888
Length = 253
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 181 SGQLWGRLRRPSQSSLVGGAAASNRHLSTLCR 86
SG WGR +Q+ LVG ++A S CR
Sbjct: 126 SGSGWGRFIGCTQTRLVGSSSAGKTRTSVCCR 157
>07_01_0636 +
4761858-4762421,4763596-4763819,4763961-4764309,
4764648-4765331
Length = 606
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 374 GLNPARSYAPIGRATWSPRLAPARSPPWG 460
G++P+R A +P LAPA +P WG
Sbjct: 163 GVSPSRVAVTAAAAEPTPALAPAPAPEWG 191
>04_04_0462 + 25393733-25394347
Length = 204
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 462 VPQGGLLAGASRGDHVALPIGAYERAGFNPGNVCRVC 352
VP GG G G H + +Y A G+V RVC
Sbjct: 96 VPPGGKAGGVCLGGHSVAAVVSYGGAFLGEGSVGRVC 132
>02_02_0349 + 9237537-9238334
Length = 265
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 202 RANLWSESGQLWGRLRRPSQSSLVGGAA 119
+A W GQ+WG R S GGAA
Sbjct: 25 QAGAWMRGGQIWGEPARGSGGLRTGGAA 52
>09_01_0013 - 355103-355435
Length = 110
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 386 ARSYAPIGRATWSPRLAPARSPPW 457
AR A GR W PR P R P W
Sbjct: 28 ARGGAAGGRRAWRPRWRPQRRPRW 51
>07_01_0077 +
566895-567127,567207-567331,571204-571340,571437-571542,
571635-571885,572018-572128,572209-572320,572626-572716,
573168-573507,573678-573900,573946-574204,574274-574481,
574572-574622,574712-574870,574956-575120,575322-575399,
575732-576031,576107-576259,576871-576918,577019-577188,
577738-577852,578462-578623,578789-578893,578969-579199,
579277-579410,579484-579738,579822-580110,580214-580306,
580395-580520,580646-580897
Length = 1693
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 381 IPHVHMLRSGERRGPLGSRRPEVRPGELH 467
IPH L + + P+ S++P+VR E+H
Sbjct: 158 IPHSEHLNNDLTQDPVASKKPKVRKKEIH 186
>06_03_0332 + 19652207-19652995
Length = 262
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 398 APIGRATWSPRLAPARSPPWGTTSPPRITRRPCP 499
A I A SP ++P+ + PW R++R P P
Sbjct: 215 AAIDAAARSPAMSPSPTRPWTPERVARVSRSPSP 248
>05_03_0215 + 10347431-10348831
Length = 466
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +2
Query: 371 PGLNPARSYAPIGRATWSPRLAPARSPP----WGTTSPPRITR-RPCPTDSWLHERSH 529
PG A ++ IG +TWS P WG PPR + PCP++ W SH
Sbjct: 340 PGWTQAPRHS-IGVSTWSSASEDRWHAPDDIHWGDNQPPRSSGVPPCPSE-WGSSSSH 395
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 425 PRLAPARSPPWGTTSPPRITRRPCPTDSWLHERSHNVRD 541
P APA PP P TR PCP+ L R+ RD
Sbjct: 14 PAPAPAPPPPNLKPKPAPTTRGPCPSPRTLVARAAPRRD 52
>02_05_0683 + 30877731-30878243
Length = 170
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 474 GGDVVPQGGLLAG-ASRGDHVALPIGAYERAGFNPGNVC 361
GG GG A A+RG VA+P+ A A + GN C
Sbjct: 126 GGSGASDGGSTAAMAARGSTVAVPVAAAAVARGSRGNTC 164
>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
Length = 696
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 434 APARSPPWGTTSPPRITRRPCPTDS 508
APA +PP +P R+ RRP T S
Sbjct: 13 APAAAPPSAVRTPRRLRRRPLKTAS 37
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 260 EPRTRARAPAGTEQRCAPRTREPLE*EWSAVGKASSTLAEQFGGRRGCIQSPLEHIVPSS 81
+ R ++R+P+ + +R R+R P++ S ++ S GRR S H S
Sbjct: 510 DARGKSRSPSPSARRSKSRSRSPIKYRRSRRSRSYSPPVRHTRGRRSRSPSRSYHSKYGS 569
Query: 80 SRSLR 66
RS R
Sbjct: 570 DRSYR 574
>12_01_0423 +
3337401-3337419,3337777-3338235,3338650-3338735,
3338974-3339022,3339225-3339533,3339555-3339710,
3339871-3340086,3340404-3340906,3341050-3341116,
3341215-3341272,3341561-3341699,3341840-3341956,
3342069-3342246,3342459-3343093
Length = 996
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 501 QIPGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPY 611
Q G + T PF+ P GSP++ G + +SP+
Sbjct: 27 QTGGFGQANTTTTNPFAPKPFGSPITAFGAQTGNSPF 63
>06_03_1149 + 28018932-28020529,28020989-28021067
Length = 558
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 537 RTLCDLSCNQESVGHGLLVIRGGDVVPQGGLLAGASR 427
RTL D + +ES H +L +RGG + G LA A +
Sbjct: 510 RTLADYNIQKESTLHLVLRLRGGHLYIADGGLATAEK 546
>06_03_0089 - 16475677-16476309
Length = 210
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +1
Query: 118 QPRRPPNCSARVDEAFPTADHSHS--KGSRVRGAQRCSVPA 234
+P RP C+ R A P D + S AQRC VPA
Sbjct: 86 RPPRPSICTRRNSPATPPPDPEEEEVRHSSRPAAQRCQVPA 126
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = -3
Query: 446 FWPARAEGTTSLSRSEHMNVRDSTRATSAGSVRANQQLSYLGSR---LRVVCCCISCSRA 276
+WP + + + +E++ +T AT A + + +Q+ GS+ L C S S
Sbjct: 810 YWPHYYDESAYNTTAENLGQVTTTSATDASAAQTSQKERLPGSKSVDLVAEKDCSSASNK 869
Query: 275 LASVSEPRTRARA-PAGTE 222
+A+ SE + A A P G E
Sbjct: 870 VANCSESQPTAWAGPPGFE 888
>01_07_0198 -
41918276-41918408,41918486-41918841,41919091-41919237,
41919666-41921789,41922150-41922344,41922488-41922568,
41923325-41923414,41923507-41923593,41923914-41923961
Length = 1086
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 386 ARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCPTDSWLHERSHNVRDTV 547
+R+ +P+ R T PR G TSP I PT+ L N+R V
Sbjct: 823 SRATSPVSRRTSPPRSTTPTPTLGGLTSPRVIANDAKPTNDSLSHEVLNLRSQV 876
>01_05_0164 + 18827390-18827710
Length = 106
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +2
Query: 410 RATWSPRLAP--ARSPPWGTTSP 472
R TW P LAP +R PP TT P
Sbjct: 46 RTTWRPDLAPTTSRRPPATTTDP 68
>01_03_0224 + 13940419-13941786
Length = 455
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 398 APIGRATWSPRLAPARSPP 454
AP ATWS L ARSPP
Sbjct: 200 APAVHATWSRELLDARSPP 218
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,721,662
Number of Sequences: 37544
Number of extensions: 514028
Number of successful extensions: 2301
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2297
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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