Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0690
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical pr... 85 3e-17
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 84 9e-17
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 84 9e-17
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 84 9e-17
AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical... 56 3e-08
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 34 0.076
AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical... 30 1.6
AL132904-18|CAC35853.1| 457|Caenorhabditis elegans Hypothetical... 29 2.1
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 29 3.8
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 29 3.8
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical pr... 28 5.0
U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 rela... 28 5.0
AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell fac... 28 5.0
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 5.0
Z81041-12|CAE17708.2| 81|Caenorhabditis elegans Hypothetical p... 28 6.6
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 28 6.6
Z72510-3|CAA96653.1| 366|Caenorhabditis elegans Hypothetical pr... 27 8.7
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr... 27 8.7
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 27 8.7
>Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical
protein R11A5.4b protein.
Length = 582
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +3
Query: 501 QIPGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVFSMRVMTRI 644
+ PGCM GR MYVIPFSMGPVG PLSKIG+++TDS YVV SMR+MTR+
Sbjct: 160 RFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRV 207
Score = 57.2 bits (132), Expect = 9e-09
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +1
Query: 256 GSETEARAXXXXXXXXXXXKRLPKYDNCWLARTDPADVARVESRTFICSDRESDVVPSAR 435
GS+ EA +L Y+N ++ RTDP DVARVES+T++ + + D V +
Sbjct: 78 GSQHEADELIDKLIERGMLSKLEAYENNYICRTDPKDVARVESKTWMVTKNKYDTVTHTK 137
Query: 436 AGQKSALGNYISPPDYEKAVSDRF 507
G + +G++++P D + RF
Sbjct: 138 EGVEPIMGHWLAPEDLATELDSRF 161
>Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical
protein R11A5.4d protein.
Length = 618
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +3
Query: 501 QIPGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVFSMRVMTRI 644
+ PGCM GR MYVIPFSMGPVG PLSKIG+++TDS YVV SMR+MTR+
Sbjct: 124 RFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRV 171
Score = 57.2 bits (132), Expect = 9e-09
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +1
Query: 256 GSETEARAXXXXXXXXXXXKRLPKYDNCWLARTDPADVARVESRTFICSDRESDVVPSAR 435
GS+ EA +L Y+N ++ RTDP DVARVES+T++ + + D V +
Sbjct: 42 GSQHEADELIDKLIERGMLSKLEAYENNYICRTDPKDVARVESKTWMVTKNKYDTVTHTK 101
Query: 436 AGQKSALGNYISPPDYEKAVSDRF 507
G + +G++++P D + RF
Sbjct: 102 EGVEPIMGHWLAPEDLATELDSRF 125
>Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical
protein R11A5.4c protein.
Length = 587
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +3
Query: 501 QIPGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVFSMRVMTRI 644
+ PGCM GR MYVIPFSMGPVG PLSKIG+++TDS YVV SMR+MTR+
Sbjct: 93 RFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRV 140
Score = 57.2 bits (132), Expect = 9e-09
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +1
Query: 256 GSETEARAXXXXXXXXXXXKRLPKYDNCWLARTDPADVARVESRTFICSDRESDVVPSAR 435
GS+ EA +L Y+N ++ RTDP DVARVES+T++ + + D V +
Sbjct: 11 GSQHEADELIDKLIERGMLSKLEAYENNYICRTDPKDVARVESKTWMVTKNKYDTVTHTK 70
Query: 436 AGQKSALGNYISPPDYEKAVSDRF 507
G + +G++++P D + RF
Sbjct: 71 EGVEPIMGHWLAPEDLATELDSRF 94
>Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical
protein R11A5.4a protein.
Length = 654
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +3
Query: 501 QIPGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVFSMRVMTRI 644
+ PGCM GR MYVIPFSMGPVG PLSKIG+++TDS YVV SMR+MTR+
Sbjct: 160 RFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRV 207
Score = 57.2 bits (132), Expect = 9e-09
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +1
Query: 256 GSETEARAXXXXXXXXXXXKRLPKYDNCWLARTDPADVARVESRTFICSDRESDVVPSAR 435
GS+ EA +L Y+N ++ RTDP DVARVES+T++ + + D V +
Sbjct: 78 GSQHEADELIDKLIERGMLSKLEAYENNYICRTDPKDVARVESKTWMVTKNKYDTVTHTK 137
Query: 436 AGQKSALGNYISPPDYEKAVSDRF 507
G + +G++++P D + RF
Sbjct: 138 EGVEPIMGHWLAPEDLATELDSRF 161
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 83.8 bits (198), Expect = 9e-17
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = +3
Query: 501 QIPGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVFSMRVMTRIG 647
+ PGCM GR MYV+P+SMGP+G PLSK G+E+TDSPYVV MR MTR+G
Sbjct: 147 RFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCMRTMTRMG 195
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +1
Query: 319 LPKYDNCWLARTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVS 498
L Y+N +L RTDP DVARVES+T++ + + D V G + +G ++S + +
Sbjct: 86 LKAYENNYLCRTDPRDVARVESKTWMVTKDKYDSVCHTPDGVRPIMGQWMSEEQFGVELD 145
Query: 499 DRF 507
RF
Sbjct: 146 SRF 148
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 179 TLTPKVRAFVERSAALCQPEHVHVC 253
+L+PKV+ FV A L P +++C
Sbjct: 39 SLSPKVQRFVAEKAELMNPAGIYIC 63
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 83.8 bits (198), Expect = 9e-17
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = +3
Query: 501 QIPGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVFSMRVMTRIG 647
+ PGCM GR MYV+P+SMGP+G PLSK G+E+TDSPYVV MR MTR+G
Sbjct: 37 RFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCMRTMTRMG 85
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 83.8 bits (198), Expect = 9e-17
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = +3
Query: 501 QIPGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVFSMRVMTRIG 647
+ PGCM GR MYV+P+SMGP+G PLSK G+E+TDSPYVV MR MTR+G
Sbjct: 147 RFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCMRTMTRMG 195
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +1
Query: 319 LPKYDNCWLARTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVS 498
L Y+N +L RTDP DVARVES+T++ + + D V G + +G ++S + +
Sbjct: 86 LKAYENNYLCRTDPRDVARVESKTWMVTKDKYDSVCHTPDGVRPIMGQWMSEEQFGVELD 145
Query: 499 DRF 507
RF
Sbjct: 146 SRF 148
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 179 TLTPKVRAFVERSAALCQPEHVHVC 253
+L+PKV+ FV A L P +++C
Sbjct: 39 SLSPKVQRFVAEKAELMNPAGIYIC 63
>AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical
protein H04M03.1 protein.
Length = 624
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +3
Query: 516 MRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVFSMRVMTRI 644
M GRTMYV+PFSMG +GS + +GV+ITD P +V ++R R+
Sbjct: 177 MSGRTMYVVPFSMGTIGSRRAVVGVQITDDPVLVLNLRTTFRV 219
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 34.3 bits (75), Expect = 0.076
Identities = 23/78 (29%), Positives = 29/78 (37%)
Frame = +2
Query: 329 TITVGWPGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCPTDS 508
T+T P T PG P ++ P +T P PW T+PP T R P S
Sbjct: 134 TVTPPSPSVTPGGRPGSTPPATFPPGSISTVRYTPGPTPPGPWTYTAPPYYTYRTVPPAS 193
Query: 509 WLHERSHNVRDTVLDGPC 562
+E T PC
Sbjct: 194 NHYETVPPAVQTTPQPPC 211
>AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical
protein F07B7.14 protein.
Length = 401
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 423 PLGSRRPEVRPGELHLPPGLREGRVRQIPGCMRGRTMYVIPFSMGPVG 566
P RRPE R +E ++ C R RT +P S+GP G
Sbjct: 76 PASCRRPEPRSSSQPKENPPKEKISTRLASCRRPRTSSSLPLSLGPSG 123
>AL132904-18|CAC35853.1| 457|Caenorhabditis elegans Hypothetical
protein Y111B2A.24 protein.
Length = 457
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 443 RSPPWGTTSPPRITRRPCPTDSWLHERSH 529
R PP +PPR+ P T+S ER+H
Sbjct: 203 RDPPTAQGAPPRVFEFPDSTESQFRERTH 231
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 410 RATWSPRLAPARSPPWGTTSPPRITRRPCPTDSWLHERSHNVRDTVL 550
R++ SPR +P RSP PR + R P L E H++RDT++
Sbjct: 488 RSSASPRQSPRRSP----HESPRHSPRNSPQKEQLFE--HSIRDTIM 528
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 68 EDYVRKTAQCAQVAIGCSRAAHQTALRGSTKPSPQLTTLT 187
E ++ K + +GC R+ ++ L+ T+ S +TTLT
Sbjct: 76 EKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLT 115
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 68 EDYVRKTAQCAQVAIGCSRAAHQTALRGSTKPSPQLTTLT 187
E ++ K + +GC R+ ++ L+ T+ S +TTLT
Sbjct: 84 EKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLT 123
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 320 CPNTITVGWPGQTRQTLPGLNPARSYAPIG-RATWSPRLAPA-RSPPWGTTSPPRITRRP 493
CP P + + P P S A G RA + R PA R+PP T +PP T RP
Sbjct: 276 CPQRQDDRTPPSSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPATTRAPP-ATTRP 334
Query: 494 CP 499
P
Sbjct: 335 AP 336
>Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical
protein ZC410.4b protein.
Length = 755
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -1
Query: 241 VLRLAQSSAALHERANLWSESGQLWGRLRRPSQSSLVGGAAASNRH 104
+LR + + NL SG RLRRPSQ S G +++ RH
Sbjct: 4 LLRAVGFGRSSNTNRNLRPSSGASGDRLRRPSQMS-AGAQSSATRH 48
>Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical
protein ZC410.4a protein.
Length = 769
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -1
Query: 241 VLRLAQSSAALHERANLWSESGQLWGRLRRPSQSSLVGGAAASNRH 104
+LR + + NL SG RLRRPSQ S G +++ RH
Sbjct: 4 LLRAVGFGRSSNTNRNLRPSSGASGDRLRRPSQMS-AGAQSSATRH 48
>U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 related
protein 1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +2
Query: 326 NTITVGWP---GQTRQTLP-GLNPAR--SYAPIGRATWSPRLAPARSPP 454
N++ + WP G + L G A+ S +PI RAT SPR P+ PP
Sbjct: 393 NSLEISWPIVQGASGYFLQIGFGDAKEQSVSPIKRATTSPRKQPSIVPP 441
>AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell factor
1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +2
Query: 326 NTITVGWP---GQTRQTLP-GLNPAR--SYAPIGRATWSPRLAPARSPP 454
N++ + WP G + L G A+ S +PI RAT SPR P+ PP
Sbjct: 393 NSLEISWPIVQGASGYFLQIGFGDAKEQSVSPIKRATTSPRKQPSIVPP 441
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/78 (26%), Positives = 26/78 (33%)
Frame = +2
Query: 329 TITVGWPGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCPTDS 508
T+T P T PG P ++ P +T P PW T PP R P
Sbjct: 211 TVTPPSPSVTPGGRPGSTPPATFPPGSVSTVRYTPGPTPPAPWTYTVPPYSGYRTIPPVY 270
Query: 509 WLHERSHNVRDTVLDGPC 562
+E T PC
Sbjct: 271 NHYETVPPAAQTTPQPPC 288
>Z81041-12|CAE17708.2| 81|Caenorhabditis elegans Hypothetical
protein C27A7.8 protein.
Length = 81
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -2
Query: 273 RLCLGAAHTCTCSG 232
R C GA+ TCTCSG
Sbjct: 33 RTCTGASTTCTCSG 46
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 267 CLGAAHTCTCSGWHRAALRSTNARTFG 187
C G HT C +R A R+ N R FG
Sbjct: 370 CKGNHHTVFCQSHNRNATRNPNQREFG 396
>Z72510-3|CAA96653.1| 366|Caenorhabditis elegans Hypothetical
protein F53B7.4 protein.
Length = 366
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 65 PEDYVRKTAQCAQVAIGCSRAAHQTALRGSTKPSPQLTTLTPKVRAFVER-SAALCQP 235
P+D KT G +R H R + +P+P L+ + P+V + ++C+P
Sbjct: 262 PKDEGEKTLTVPSTPTGHTRHRHSILSRINFQPAPALSEIEPEVEDREQSPQESICEP 319
>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical
protein T23H2.3 protein.
Length = 1009
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 347 PGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTS 469
P R TLP + + +P SP +P SPP T S
Sbjct: 191 PPPNRSTLPSVETSSGNSPQTPYPGSPEASPQPSPPKNTAS 231
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 537 RTLCDLSCNQESVGHGLLVIRGGDV 463
RTL D + +ES H +L +RGGD+
Sbjct: 814 RTLSDYNIQKESTLHLVLRLRGGDI 838
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,117,968
Number of Sequences: 27780
Number of extensions: 373257
Number of successful extensions: 1308
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -