Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0689
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.61 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 34  ALLDNGSQHSLISEKL-AKRLNTNFTQSTVRIAGVGQHLTHTNKSCVI 174
           ALLD GS+ S ISE++ +K + T     T+ +  +        +SC +
Sbjct: 102 ALLDTGSEVSCISEEVWSKLIETGNKPPTLPVTSIHLRGAIGQRSCQV 149


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/54 (24%), Positives = 23/54 (42%)
 Frame = -3

Query: 426 TSYLIKMDLKVNGSYPVPKDPKIYQHRVINLCLMIHRKWDLLVVYYRGYLNVRV 265
           T + +     +  S    K  K+YQ     L  +I+   ++  VY R Y+N  +
Sbjct: 8   TCFYVAKFFAITPSSIYDKPTKLYQKLYPVLMFLIYTITEIYSVYERRYMNAHL 61


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 545 INLLFPKTYEVVI*RMTKITLNFVY 471
           +NLL P+  E+V+    + T +F+Y
Sbjct: 80  VNLLNPEDVELVLTDTKQNTKSFIY 104


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 409 NGPEGKRILPCSKRSQNISAPSNKSMSDDTSKVGS 305
           + P G  IL  SKR Q   A S+  +  + SK G+
Sbjct: 198 HSPPGDGILDFSKRGQKSDADSDSDVV-NLSKPGT 231


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 545 INLLFPKTYEVVI*RMTKITLNFVY 471
           +NLL P+  E+V+    + T +F+Y
Sbjct: 80  VNLLNPEDVELVLTDTKQNTKSFIY 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,013
Number of Sequences: 336
Number of extensions: 4035
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)