Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0689
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    62   1e-11

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 62.5 bits (145), Expect = 1e-11
 Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = +3

Query: 282 IPDNIQLADPTFDVSSDIDLLLGADIFWDLLEQGRIRLPSG-PFLLNTKLGWVVSGPICS 458
           +P +++LADPTF     ID+L+GAD F ++++  +I+L    P LL T+LGW+VSG    
Sbjct: 542 LPKDVRLADPTFHERGSIDMLIGADTFVEMIKAKKIKLDHELPTLLETELGWIVSG--AY 599

Query: 459 NHSNINE 479
            H+N+N+
Sbjct: 600 KHNNLNQ 606



 Score = 61.3 bits (142), Expect = 3e-11
 Identities = 32/86 (37%), Positives = 53/86 (61%)
 Frame = +1

Query: 4   DQNNRYHVARALLDNGSQHSLISEKLAKRLNTNFTQSTVRIAGVGQHLTHTNKSCVISMR 183
           D N++ +  RALLDNGSQ + I+E++A+ L     + + +IAGVG  +     S V ++R
Sbjct: 449 DVNDQPYKVRALLDNGSQLNFITERVAQELRLKRARVSEQIAGVGGAIMRVAGSVVGTIR 508

Query: 184 SKTSNFNKRISCLVLPQITSSLPIQT 261
           S T+ +   +  L+LP+I + LP +T
Sbjct: 509 SLTTEYTTCLEFLILPKIATDLPSET 534



 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +2

Query: 515 LRKFWEIEDLSVSKNILTQDENKCEKLFIDTTKREK 622
           +  F+ IE++   +N+   +E +CE  F  TT+R++
Sbjct: 625 MNTFFNIEEVQ-DQNLWNVEERECEDHFQATTRRDE 659


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,557
Number of Sequences: 2352
Number of extensions: 15854
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)