Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0689
         (713 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U11691-1|AAA19905.1|  796|Drosophila melanogaster E239.9-1 protein.    50   4e-06
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.       50   4e-06
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    45   1e-04
U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein.     43   4e-04
AY113286-1|AAM29291.1|  608|Drosophila melanogaster AT20169p pro...    34   0.17 
AE014297-3437|AAF56221.1|  608|Drosophila melanogaster CG5933-PA...    34   0.17 
AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein ...    31   1.2  
AY069828-1|AAL39973.1|  512|Drosophila melanogaster SD07683p pro...    31   1.6  

>U11691-1|AAA19905.1|  796|Drosophila melanogaster E239.9-1 protein.
          Length = 796

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = +1

Query: 31  RALLDNGSQHSLISEKLAKRLNTNFTQSTVRIAGVGQHLTHTNK-SCVISMRSKTSNFNK 207
           RAL+D+GSQ ++ISE+ A+ L     +S   I+GV    T  +K   VIS+R+   N   
Sbjct: 454 RALIDSGSQSTIISEESAQILKLKKFRSHTEISGVSSTGTCISKHKAVISIRNSPKNL-- 511

Query: 208 RISCLVLPQITSSLPIQTFH 267
            I  ++LP++  +LP+ T +
Sbjct: 512 EIEAIILPKLMKALPVNTIN 531



 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = +3

Query: 291 NIQLADPTFDVSSDIDLLLGADIFWDLLEQGRIRLPSGPFLLNTKLGWVVSG 446
           N +LADP F+    IDL++GAD++  +L+ G I++  G     T  GW+VSG
Sbjct: 539 NFKLADPDFNKPGRIDLIIGADVYTHILQNGVIKI-DGLLGQKTDFGWIVSG 589


>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
          Length = 2360

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = +1

Query: 31  RALLDNGSQHSLISEKLAKRLNTNFTQSTVRIAGVGQHLTHTNK-SCVISMRSKTSNFNK 207
           RAL+D+GSQ ++ISE+ A+ L     +S   I+GV    T  +K   VIS+R+   N   
Sbjct: 533 RALIDSGSQSTIISEESAQILKLKKFRSHTEISGVSSTGTCISKHKAVISIRNSPKNL-- 590

Query: 208 RISCLVLPQITSSLPIQTFH 267
            I  ++LP++  +LP+ T +
Sbjct: 591 EIEAIILPKLMKALPVNTIN 610



 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = +3

Query: 291 NIQLADPTFDVSSDIDLLLGADIFWDLLEQGRIRLPSGPFLLNTKLGWVVSG 446
           N +LADP F+    IDL++GAD++  +L+ G I++  G     T  GW+VSG
Sbjct: 618 NFKLADPDFNKPGRIDLIIGADVYTHILQNGVIKI-DGLLGQKTDFGWIVSG 668


>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1830

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +3

Query: 294 IQLADPTFDVSSDIDLLLGADIFWDLLEQGRIRLPSGPFL-LNTKLGWVVSGPI 452
           ++ ADPTF  SS ID+L+GADI   ++  G  +   G  L   T  GWV++GPI
Sbjct: 650 LRWADPTFFESSQIDVLIGADILPSIMMDGTRQNICGSLLGQETIFGWVLTGPI 703



 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
 Frame = +1

Query: 28  ARALLDNGSQHSLISEKLAKRLNTNFTQSTVRIAGVGQHLT-HTNKSCVISMRSKTS-NF 201
           ARAL+D+GS+ + ISE+L   +   F  +  +++G+   ++  ++K C   +RS T    
Sbjct: 559 ARALIDSGSEATFISERLFNLIKLPFRNTRTQVSGLNHSVSAKSSKLCHFGIRSPTKPGL 618

Query: 202 NKRISCLVLPQITSSLP 252
                  VLP+++  LP
Sbjct: 619 QLDTEAYVLPELSGKLP 635



 Score = 34.7 bits (76), Expect = 0.13
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +2

Query: 515 LRKFWEIEDLSVSKNILTQDENKCEKLFIDTTKRE 619
           L KFWE+EDL V   ++ + ++ CE+ F+ TT ++
Sbjct: 731 LSKFWEVEDLPV--KMVKESDSYCERNFLQTTTKD 763


>U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein.
          Length = 1607

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 294 IQLADPTFDVSSDIDLLLGADIFWDLLEQGRIRLPSG-PFLLNTKLGWVVSG 446
           + LADPTF     ID+++G+D  W L    R    +  P  LNT  GW+++G
Sbjct: 427 LPLADPTFCTPGAIDVIVGSDQLWSLYTGDRKHFGNDFPIALNTVFGWILAG 478


>AY113286-1|AAM29291.1|  608|Drosophila melanogaster AT20169p
           protein.
          Length = 608

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +1

Query: 91  LNTNFTQSTVRIAGVGQHLTHTNKSCVISMRSKTSNFNKRISCLVL 228
           + TN  Q  +R    G  L H  + C++ M+   +N N+ + C V+
Sbjct: 476 VKTNQLQRIIRTGRTGHWLNHGKEHCLVGMKGNPTNLNRGLDCDVI 521


>AE014297-3437|AAF56221.1|  608|Drosophila melanogaster CG5933-PA
           protein.
          Length = 608

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +1

Query: 91  LNTNFTQSTVRIAGVGQHLTHTNKSCVISMRSKTSNFNKRISCLVL 228
           + TN  Q  +R    G  L H  + C++ M+   +N N+ + C V+
Sbjct: 476 VKTNQLQRIIRTGRTGHWLNHGKEHCLVGMKGNPTNLNRGLDCDVI 521


>AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein
           protein.
          Length = 1571

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +1

Query: 28  ARALLDNGSQHSLISEKLAKRLNTNFTQSTVRIAGVGQHLTHTNKSCVIS 177
           ARAL+D+GS+ + I+E L   +   F     +++G+ Q +    K+  +S
Sbjct: 510 ARALIDSGSEATFITEPLFNLIRLPFQVVQAQVSGLNQTVAAQFKNAAVS 559



 Score = 29.5 bits (63), Expect = 4.7
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +3

Query: 231 SNNLKFAYTNISLEHLNIPDNIQLADPTFDVSSDIDLLLGADIFWDLLEQGRIRLPSGPF 410
           S + K A+   S + L    +  LADP F  S+ ID+L+ +     +L  G      G  
Sbjct: 579 STSRKSAFLPNSAKFLRDLPDFPLADPKFYESAPIDVLIRSPHPASVLLSGAKTNICGSL 638

Query: 411 L-LNTKLGWVVSGPICSN 461
           L   T   WV++GP+ ++
Sbjct: 639 LGQETIFRWVLTGPVSAS 656


>AY069828-1|AAL39973.1|  512|Drosophila melanogaster SD07683p
           protein.
          Length = 512

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +1

Query: 34  ALLDNGSQHSLISEKLAKRLNTNFTQSTVRIAGVGQ 141
           ALLD GS+ ++ISE   + L  + + +   I GVGQ
Sbjct: 466 ALLDQGSEATIISEHAVQSLQLSRSTTRTSITGVGQ 501


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,753,162
Number of Sequences: 53049
Number of extensions: 663454
Number of successful extensions: 1504
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)