Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0688
(631 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 34 0.019
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S... 29 0.42
SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 29 0.42
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 29 0.73
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 28 0.97
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 27 1.7
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 1.7
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 27 2.2
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 27 2.2
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 27 3.0
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 3.0
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 3.9
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.9
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 26 3.9
SPBC28F2.09 |||transcription factor TFIIA complex large subunit ... 25 6.8
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 25 6.8
SPBC14C8.04 |||acetolactate synthase regulatory unit|Schizosacch... 25 6.8
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 25 9.0
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 33.9 bits (74), Expect = 0.019
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 116 SFPARLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPS 259
+FP R TS S + P P S TPS SS+P + + IPS
Sbjct: 100 NFPFRPPTRLTSTPSNSSSLPSIPSSSSTPSISSIPHTTSSVSNDIPS 147
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 185 PGVSPTPSASSLPQGSEKTISPIPSRRSVK 274
P P PS+SSLP G+ T S P R V+
Sbjct: 180 PTPLPPPSSSSLPTGTISTNSFCPYERKVQ 209
>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 29.5 bits (63), Expect = 0.42
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Frame = +1
Query: 124 GEAVPESN-----FEGERRQWSARLPWSVSHAKRLLAPP 225
GE +P N EG R+ W+ ++P V + LAPP
Sbjct: 491 GEKIPHPNGLEYTLEGPRKNWTGKIPMFVKKSTFRLAPP 529
>SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 343
Score = 29.5 bits (63), Expect = 0.42
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 158 SVGNGQPGSPGVSPTPSASSLPQGSEK 238
S N +P S P+ SASSLP G++K
Sbjct: 65 STQNPEPTSASTPPSASASSLPNGAQK 91
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 28.7 bits (61), Expect = 0.73
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 122 PARLSPNRTSK-ESVGNGQ--PGSPGVSPTPSASSLPQGSEKTISPIPSRRSVKS 277
P+ LSPN + + GNG G SPTPS+ P G+ ++S PS S+ S
Sbjct: 249 PSPLSPNSSIRNREGGNGSYFDGPLTASPTPSS---PTGTPNSMSKSPSLSSLAS 300
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 28.3 bits (60), Expect = 0.97
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 128 RLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKT 241
+LSP +SKE+ + S +S P AS +P+G +++
Sbjct: 58 KLSPVASSKENYPDNHMHSKHISKLPIASPIPRGLDRS 95
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 89 SLSQWTKTLSFPARLSPNRTSKESVGNGQPGSPGVSPTPSASSLP 223
S+S + + P + SP+ S SVG SP S T +++S P
Sbjct: 9 SVSVASPAMETPTKASPDSKSPNSVGAIPSSSPLASSTKASTSTP 53
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 438 HDTAGAHAGPPPLHVPAAPGQLRACHTEFSGSALEEHQG 554
H G H PPP+H PG+ F LEEH+G
Sbjct: 317 HHEPGEHMPPPPMH--HEPGE-HMPPPPFKHHELEEHEG 352
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 140 NRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIP 256
NR + Q G +SP P SS+P +E SP P
Sbjct: 93 NRIRSLNASKSQSGRKSLSPNP--SSVPSSTETKASPTP 129
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 456 HAGPPPLHVPAAPGQLRACHTEFSGSA 536
HA PPLHVPA P A H+ G +
Sbjct: 265 HAPIPPLHVPAVP-LTSASHSSSDGKS 290
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 26.6 bits (56), Expect = 3.0
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 197 PTPSASSLPQGSEKTISPIPSRRSVKSFIPILSLRRR*WGRWCTASITKK 346
PT + + Q + + + I S R F P + R GRWCT + +K
Sbjct: 942 PTDTFVQVKQMNRRGATSIVSVRPDPLFWPTCIIERDSNGRWCTKHLQRK 991
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 26.6 bits (56), Expect = 3.0
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 116 SFPARLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPSRRSVKSFIPI 289
S P+ LSPN E+ S P PS S + + S IP +SV +PI
Sbjct: 320 SVPSNLSPNPAQNENPSTTSIPSINNQPFPSGLSASNSNFASSSFIP--QSVPQLLPI 375
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 3.9
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 74 ENMVRSLSQWTKTLSFPARLSPNRTSKESVGNGQPGSPGVSP-TPSASSLPQGSEKTISP 250
E++V S + + P+R S ++T S G P +P VS +P+ +SL ISP
Sbjct: 29 EDLVESGHKPLPNMHRPSRDSNSQTHNISFNIGTPTAPTVSTGSPAVASLHDQVAAAISP 88
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 3.9
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 134 SPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPSRRSVKS 277
+P TS + + S SP+ S+SS S + S IPS S S
Sbjct: 201 APTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSS 248
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 26.2 bits (55), Expect = 3.9
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Frame = +1
Query: 274 IIYPDPESEKAIMGSVVYCIHHKE-GCQWSDELRKLKAHLNTCKHDAVL-----CA---- 423
++ DP EK + + + E CQW L L + N KH +L C+
Sbjct: 976 LVLIDPFEEKVLKAFNMLSKGYAEYRCQWEGCLANLHSLENFIKHVLLLHHPKSCSVVKC 1035
Query: 424 --AHCGAMIPRVLMQDHLRYTCPRRRANCE 507
A C ++P + HLR R NCE
Sbjct: 1036 LWASCDMVLPSEEFEMHLRGHLNNIRLNCE 1065
>SPBC28F2.09 |||transcription factor TFIIA complex large subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 369
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 104 TKTLSFPARLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQ 226
+ T SF L PN+ S + G+ S +P S + +PQ
Sbjct: 194 SSTNSFGGLLLPNQNSPKKSELGETESSNTTPANSRNDVPQ 234
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 164 GNGQPGSPGVSPTPSASSLPQGSEKTISPIPSRR 265
G P S S + A S P K SPIPSRR
Sbjct: 181 GQSDPESSNASDSDFADS-PDDLTKVRSPIPSRR 213
>SPBC14C8.04 |||acetolactate synthase regulatory
unit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 289
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 421 AAHCGAMIPRVLMQDHLRYTCPRRRANCEPATPSSRVARSR 543
A H + +PR + + R T P +N +TP +RV R +
Sbjct: 29 ALHANSPLPRCRIIEPPRATVPEAVSNIIMSTPFNRVQRPK 69
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 104 TKTLSFPARLSPNRTSKESVGNGQPGSPGVSPTPSASS 217
+ L FP RL+ N T+ + N SPTPS+ S
Sbjct: 216 SNNLPFP-RLNNNNTNNNNDNNAIEKRDSASPTPSSVS 252
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,559,306
Number of Sequences: 5004
Number of extensions: 53104
Number of successful extensions: 207
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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