BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0688
(631 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 26 1.1
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 1.5
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 25 2.6
AJ297932-1|CAC35452.1| 90|Anopheles gambiae gSG1a protein prot... 25 2.6
CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein... 24 3.5
AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein. 24 3.5
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 24 4.6
EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle... 23 6.1
AJ697720-1|CAG26913.1| 207|Anopheles gambiae putative odorant-b... 23 6.1
DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 23 8.0
AY745211-1|AAU93478.1| 86|Anopheles gambiae cytochrome P450 pr... 23 8.0
AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsi... 23 8.0
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 25.8 bits (54), Expect = 1.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 167 NGQPGSPGVSPTPSASSLPQGSEKTISP 250
N +P PG SPT S S GS++++SP
Sbjct: 437 NKEPPRPGQSPTQSPS---PGSQQSLSP 461
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 25.4 bits (53), Expect = 1.5
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 122 PARLSPNRTSKESVGN-GQPGSPGVSPTPSASSLP 223
P L+ +R K + G G PG+PG P A LP
Sbjct: 55 PRGLTGHRGEKGNSGPVGPPGAPGRDGMPGAPGLP 89
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 24.6 bits (51), Expect = 2.6
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +1
Query: 334 HHKEGCQWSD-ELRKLKAHLNTCKHDAVLCAAHCGAMIP-RVLMQDHLRYTCPRRRANCE 507
H C ++ EL KLK H+ T + HC P + + H+R + +C+
Sbjct: 212 HKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCD 271
Query: 508 PATPSSRVARSRSTK 552
+R +S S K
Sbjct: 272 VC--FARFTQSNSLK 284
>AJ297932-1|CAC35452.1| 90|Anopheles gambiae gSG1a protein
protein.
Length = 90
Score = 24.6 bits (51), Expect = 2.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 473 RRWSCMSTRGIMAPQCAAHSTASCLQV 393
R W C+ + MA C+A S A LQV
Sbjct: 5 RVWCCLLSFIAMAVLCSASSAACTLQV 31
>CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein
protein.
Length = 420
Score = 24.2 bits (50), Expect = 3.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 532 LPENSVWQARSWPGAAGTCS 473
+P+N WQ RS+P + GT S
Sbjct: 4 IPKNYTWQQRSFP-STGTSS 22
>AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein.
Length = 420
Score = 24.2 bits (50), Expect = 3.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 532 LPENSVWQARSWPGAAGTCS 473
+P+N WQ RS+P + GT S
Sbjct: 4 IPKNYTWQQRSFP-STGTSS 22
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
exchanger 3 protein.
Length = 1221
Score = 23.8 bits (49), Expect = 4.6
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 115 QLPGEAVPESNFE---GERRQWSARLPWSVSHAKRLLAPPGLGENN 243
+L GEA+PE N+ ER ++ AR ++ A P G +
Sbjct: 1101 ELSGEAIPEENYTKSLPERDKYGARRAPALIKASSTNTPKSAGRRS 1146
>EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle
protein protein.
Length = 178
Score = 23.4 bits (48), Expect = 6.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 390 KYLQARRGAMCRALRRHDTAGAHAGPPPLHVPAA 491
KY A A H A AH P +H PAA
Sbjct: 86 KYAAPAYAAHYAAPAVHYPAAAHYAAPAVHYPAA 119
>AJ697720-1|CAG26913.1| 207|Anopheles gambiae putative
odorant-binding protein OBPjj10 protein.
Length = 207
Score = 23.4 bits (48), Expect = 6.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 472 RYTCPRRRANCEPATPSSRVAR 537
R CPR R+ C PS+R R
Sbjct: 75 RAYCPRTRSACAETFPSTRRRR 96
>DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain
protein protein.
Length = 285
Score = 23.0 bits (47), Expect = 8.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +3
Query: 435 RHDTAGAHAGPPPLHVPAAPG 497
RH T G+ P +P APG
Sbjct: 182 RHSTTGSSVRPSKGLIPVAPG 202
>AY745211-1|AAU93478.1| 86|Anopheles gambiae cytochrome P450
protein.
Length = 86
Score = 23.0 bits (47), Expect = 8.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 461 RTTSATRARGAGPTASLPHRVLG*RARGAPRKLRPRAHLLLEQV 592
RT +A + G P+ASLP +G R+ + + + H LL +
Sbjct: 9 RTNAAESSTGRTPSASLPF-AIGARSCIGQKIAQLQMHYLLSMI 51
>AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsive
serine proteaselike protein protein.
Length = 600
Score = 23.0 bits (47), Expect = 8.0
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 489 PRARVAEVVLHEHPRYHGAAV 427
PR + +H+HPRY +A+
Sbjct: 407 PREDIGVKSVHQHPRYSPSAL 427
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,533
Number of Sequences: 2352
Number of extensions: 16063
Number of successful extensions: 53
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -