Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0688
(631 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein. 43 2e-04
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 32 0.29
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 31 0.51
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 31 0.90
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 31 0.90
U23175-3|AAC46712.2| 959|Caenorhabditis elegans Anion/bicarbona... 30 1.6
AY887905-1|AAX34417.1| 959|Caenorhabditis elegans anion transpo... 30 1.6
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 29 2.7
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 29 2.7
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 29 2.7
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41036-8|ABA61866.1| 590|Caenorhabditis elegans Dopamine recept... 29 3.6
U41036-7|ABA61865.1| 607|Caenorhabditis elegans Dopamine recept... 29 3.6
U41036-6|ABA61864.1| 605|Caenorhabditis elegans Dopamine recept... 29 3.6
AY485309-1|AAR37416.1| 607|Caenorhabditis elegans DOP-3 protein. 29 3.6
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 4.8
U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81556-6|CAB04523.2| 421|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 6.3
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 6.3
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL110485-33|CAN86916.1| 360|Caenorhabditis elegans Hypothetical... 28 6.3
AL110485-32|CAB60360.1| 375|Caenorhabditis elegans Hypothetical... 28 6.3
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 28 6.3
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 28 6.3
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 23 7.5
Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z70309-12|CAB54293.3| 413|Caenorhabditis elegans Hypothetical p... 27 8.4
Z70309-11|CAB54291.3| 408|Caenorhabditis elegans Hypothetical p... 27 8.4
Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 27 8.4
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 27 8.4
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 27 8.4
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 27 8.4
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical
protein F45G2.6 protein.
Length = 462
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +1
Query: 286 DPESEKAIMGSVVYCIHHKEGCQWSDELRKLKAHLNTCKHDAVLCAAHCGAMIPRVLMQD 465
D +K I+ V C GC W +L L HL+ C + L CG + ++
Sbjct: 66 DRAKQKQILALPVVCTFESSGCPWDGQLGTLHDHLSECTFKSSLKCEKCGRQFAKNDLEK 125
Query: 466 HLRYTCPRRRANC 504
H R C RA C
Sbjct: 126 H-RAKCELNRAVC 137
>AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein.
Length = 462
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +1
Query: 286 DPESEKAIMGSVVYCIHHKEGCQWSDELRKLKAHLNTCKHDAVLCAAHCGAMIPRVLMQD 465
D +K I+ V C GC W +L L HL+ C + L CG + ++
Sbjct: 66 DRAKQKQILALPVVCTFESSGCPWDGQLGTLHDHLSECTFKSSLKCEKCGRQFAKNDLEK 125
Query: 466 HLRYTCPRRRANC 504
H R C RA C
Sbjct: 126 H-RAKCELNRAVC 137
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 170 GQPGSPGVSPTPSASSLPQGSEKTISPIPSRRSV 271
GQPG+ G TP A+ P G + P PSR SV
Sbjct: 251 GQPGNAGPPGTPGAAGQP-GGDAAYCPCPSRSSV 283
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 122 PARLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPS 259
P SP+ S S+ + P +P S PS+ S P S T+S P+
Sbjct: 1620 PPASSPSAPSIPSIPSTLPVAPSSSSVPSSPSAPSESTSTVSETPA 1665
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 30.7 bits (66), Expect = 0.90
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +2
Query: 134 SPNRTSKESVGNGQPGSPGVSPTPSA---SSLPQGSEKTISPIPSRRSVKSFI 283
S T +G +P SP SP P S + + E T SP+PS SVK I
Sbjct: 5514 SEEYTRASPLGPERPESPSGSPLPREEDDSHVIESHEYTSSPVPSEDSVKHVI 5566
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 30.7 bits (66), Expect = 0.90
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +2
Query: 134 SPNRTSKESVGNGQPGSPGVSPTPSA---SSLPQGSEKTISPIPSRRSVKSFI 283
S T +G +P SP SP P S + + E T SP+PS SVK I
Sbjct: 5514 SEEYTRASPLGPERPESPSGSPLPREEDDSHVIESHEYTSSPVPSEDSVKHVI 5566
>U23175-3|AAC46712.2| 959|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 3, isoform a protein.
Length = 959
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +3
Query: 375 TEGTSKYLQARRGAMCRALRRHDTAGAHAGPPPLHVPAAPGQLRACHTEFSGSALEEHQ 551
T G S G + R+ RRHD+ + + V + R CH S E HQ
Sbjct: 88 TNGASNSNSTNNGGVHRSRRRHDSDASGSANSEATVASGANTPRRCHFRRPKSTSEMHQ 146
>AY887905-1|AAX34417.1| 959|Caenorhabditis elegans anion
transporter ABTS-3 protein.
Length = 959
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +3
Query: 375 TEGTSKYLQARRGAMCRALRRHDTAGAHAGPPPLHVPAAPGQLRACHTEFSGSALEEHQ 551
T G S G + R+ RRHD+ + + V + R CH S E HQ
Sbjct: 88 TNGASNSNSTNNGGVHRSRRRHDSDASGSANSEATVASGANTPRRCHFRRPKSTSEMHQ 146
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 122 PARLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPSRRSV 271
P PN +GQPG+PG TP GS+ P P+R SV
Sbjct: 236 PGPAGPNGQPGHPGQDGQPGAPGNDGTP-------GSDAAYCPCPTRSSV 278
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 122 PARLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPSRRSV 271
P PN +GQPG+PG TP GS+ P P+R SV
Sbjct: 236 PGPAGPNGQPGHPGQDGQPGAPGNDGTP-------GSDAAYCPCPTRSSV 278
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 104 TKTLSFPARLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPSRRSVK 274
T + + + P S NG PG G+ P SASS+ ++K+ S SRR V+
Sbjct: 218 TNLVDYNHQFPPAGMSPHFDPNGYPGMTGMPPGSSASSV--RNDKSASRATSRRRVQ 272
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 104 TKTLSFPARLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPSRRSVK 274
T + + + P S NG PG G+ P SASS+ ++K+ S SRR V+
Sbjct: 218 TNLVDYNHQFPPAGMSPHFDPNGYPGMTGMPPGSSASSV--RNDKSASRATSRRRVQ 272
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 104 TKTLSFPARLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPSRRSVK 274
T + + + P S NG PG G+ P SASS+ ++K+ S SRR V+
Sbjct: 218 TNLVDYHHQFPPAGMSPHFDPNGYPGMTGMPPGSSASSV--RNDKSASRATSRRRVQ 272
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 104 TKTLSFPARLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPSRRSVK 274
T + + + P S NG PG G+ P SASS+ ++K+ S SRR V+
Sbjct: 218 TNLVDYHHQFPPAGMSPHFDPNGYPGMTGMPPGSSASSV--RNDKSASRATSRRRVQ 272
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical protein
C11E4.6 protein.
Length = 1170
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 205 KRLLAPPGLGENNLPNTITEISQIIYPDPESEKAIMGSVVYCIHH 339
K L++PP L + N E Q + D K + G+VVY HH
Sbjct: 984 KPLMSPPPLPPRSKQNNCAECPQGDF-DKIKNKLLQGNVVYRAHH 1027
>U41036-8|ABA61866.1| 590|Caenorhabditis elegans Dopamine receptor
protein 3, isoformc protein.
Length = 590
Score = 28.7 bits (61), Expect = 3.6
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +1
Query: 61 VHMNRKHGA*PVAVDEDPQLPGEAVPESNFEGERRQWSARLPWS---VSHAKRLLAPPGL 231
+H R + + +D P+L +VP E + Q S LP+S +H ++LL PG+
Sbjct: 361 LHTTRSNTSTTRLLDVKPELRSISVPSIQDEKKLSQKSNDLPFSHQNGTHKQKLLPNPGI 420
Query: 232 GENNLPNTITEISQIIYPDPESEKAIMGSVVYCIHHKEGCQWSDELRKLKAHL 390
+ T+ + + + D + + S+ + + E +SD +R K L
Sbjct: 421 LMKSKSTTLLKTNGYMDTDSLNRNSHKKSLADLLANDE-FSFSDSMRVYKNRL 472
>U41036-7|ABA61865.1| 607|Caenorhabditis elegans Dopamine receptor
protein 3, isoformb protein.
Length = 607
Score = 28.7 bits (61), Expect = 3.6
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +1
Query: 61 VHMNRKHGA*PVAVDEDPQLPGEAVPESNFEGERRQWSARLPWS---VSHAKRLLAPPGL 231
+H R + + +D P+L +VP E + Q S LP+S +H ++LL PG+
Sbjct: 378 LHTTRSNTSTTRLLDVKPELRSISVPSIQDEKKLSQKSNDLPFSHQNGTHKQKLLPNPGI 437
Query: 232 GENNLPNTITEISQIIYPDPESEKAIMGSVVYCIHHKEGCQWSDELRKLKAHL 390
+ T+ + + + D + + S+ + + E +SD +R K L
Sbjct: 438 LMKSKSTTLLKTNGYMDTDSLNRNSHKKSLADLLANDE-FSFSDSMRVYKNRL 489
>U41036-6|ABA61864.1| 605|Caenorhabditis elegans Dopamine receptor
protein 3, isoforma protein.
Length = 605
Score = 28.7 bits (61), Expect = 3.6
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +1
Query: 61 VHMNRKHGA*PVAVDEDPQLPGEAVPESNFEGERRQWSARLPWS---VSHAKRLLAPPGL 231
+H R + + +D P+L +VP E + Q S LP+S +H ++LL PG+
Sbjct: 376 LHTTRSNTSTTRLLDVKPELRSISVPSIQDEKKLSQKSNDLPFSHQNGTHKQKLLPNPGI 435
Query: 232 GENNLPNTITEISQIIYPDPESEKAIMGSVVYCIHHKEGCQWSDELRKLKAHL 390
+ T+ + + + D + + S+ + + E +SD +R K L
Sbjct: 436 LMKSKSTTLLKTNGYMDTDSLNRNSHKKSLADLLANDE-FSFSDSMRVYKNRL 487
>AY485309-1|AAR37416.1| 607|Caenorhabditis elegans DOP-3 protein.
Length = 607
Score = 28.7 bits (61), Expect = 3.6
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +1
Query: 61 VHMNRKHGA*PVAVDEDPQLPGEAVPESNFEGERRQWSARLPWS---VSHAKRLLAPPGL 231
+H R + + +D P+L +VP E + Q S LP+S +H ++LL PG+
Sbjct: 378 LHTTRSNTSTTRLLDVKPELRSISVPSIQDEKKLSQKSNDLPFSHQNGTHKQKLLPNPGI 437
Query: 232 GENNLPNTITEISQIIYPDPESEKAIMGSVVYCIHHKEGCQWSDELRKLKAHL 390
+ T+ + + + D + + S+ + + E +SD +R K L
Sbjct: 438 LMKSKSTTLLKTNGYMDTDSLNRNSHKKSLADLLANDE-FSFSDSMRVYKNRL 489
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 122 PARLSPNRTSKESVGNGQPGSPGVSPTPSA 211
P P S ++ GNG PGSPG P A
Sbjct: 120 PGPPGPPGPSGDAGGNGNPGSPGQDGQPGA 149
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 122 PARLSPNRTSKESVGNGQPGSPGVSPTPSA 211
P P S ++ GNG PGSPG P A
Sbjct: 153 PGPPGPPGPSGDAGGNGNPGSPGQDGQPGA 182
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 95 SQWTKTLSFPARLSP--NRTSKESVGNGQPGSP--GVSPTPSASSLPQGSEKTISPIPS 259
S T+T SP + TS + +G PG+ +SP+PS SS S+ + SP+ S
Sbjct: 985 SMSTQTPQSSQSTSPVESSTSGATSSSGSPGTTLTSISPSPSPSSTIGSSQGSTSPVVS 1043
>U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical
protein T27B1.2 protein.
Length = 470
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 492 PGQLRACHTEF-SGSALEEHQGN-CGHEPIYC*NKCGAKVQRRHT 620
P C ++F S LEEHQ + G +P C + C A+ RR T
Sbjct: 83 PYPCNLCSSKFGSKMELEEHQNSHTGQKPFEC-DTCNARFNRRST 126
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 631 RCCCVCRRC 605
RCCC CRRC
Sbjct: 92 RCCCCCRRC 100
>Z81556-6|CAB04523.2| 421|Caenorhabditis elegans Hypothetical
protein F58G1.6 protein.
Length = 421
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = +1
Query: 97 AVDEDPQLPGEAVPESNFEGERRQWSARLPWSVSHAKRLLAPPGLGENNLPNTITEISQI 276
AV Q+P + P + G Q + L + S + P LG PN+ I
Sbjct: 267 AVFHSFQVPFDCYPSLVWNGNPVQVTYELLLTNSGCFEIGTPVFLGNYGSPNSTRR--SI 324
Query: 277 IYPDPESEKAIMGSVVYCIHHKE 345
+YP+ S +A + YC+ E
Sbjct: 325 MYPESTSGEAPPSTTYYCVPPSE 347
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 631 RCCCVCRRC 605
RCCC CRRC
Sbjct: 90 RCCCCCRRC 98
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 631 RCCCVCRRC 605
RCCC CRRC
Sbjct: 91 RCCCCCRRC 99
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 631 RCCCVCRRC 605
RCCC CRRC
Sbjct: 92 RCCCCCRRC 100
>AL110485-33|CAN86916.1| 360|Caenorhabditis elegans Hypothetical
protein Y46G5A.18b protein.
Length = 360
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 136 GQPRREAEGLRPLRQATHHVFCSYAQHSFTELDDAKGATRPLS 8
G PR+E RP+R + +YA + +E D+ +R +S
Sbjct: 2 GVPRKENAEFRPIRVEDCDEYNNYANYDLSETDELNEHSRRIS 44
>AL110485-32|CAB60360.1| 375|Caenorhabditis elegans Hypothetical
protein Y46G5A.18a protein.
Length = 375
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 136 GQPRREAEGLRPLRQATHHVFCSYAQHSFTELDDAKGATRPLS 8
G PR+E RP+R + +YA + +E D+ +R +S
Sbjct: 2 GVPRKENAEFRPIRVEDCDEYNNYANYDLSETDELNEHSRRIS 44
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 27.9 bits (59), Expect = 6.3
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 121 PGEAVPESNFEGERRQWSARLPWSVSHAKRLLAPPGLGENNLPNTITEISQIIYPDPESE 300
PG+ + +S FEG++++ LP +S + G+G+ + ++ + E
Sbjct: 268 PGQ-LSDSEFEGDQQE--VELPQDISEGRGC----GVGQKSNVRLHEIGPRLTLELVKIE 320
Query: 301 KAI-MGSVVYCIHHKEGCQWSDELRKLKAHLNTCK 402
+ I G V+Y HK + DEL KL+AH++ K
Sbjct: 321 EGIDEGEVLY---HKHNAKTPDELIKLRAHMDKKK 352
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 179 GSPGVSPTPSASSLPQGSEKTISPIPSRRSVKS 277
G+ G SP PSASS P P+ ++ SV S
Sbjct: 221 GASGASPYPSASSNPAPPPPRPPPVTAQTSVSS 253
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 23.4 bits (48), Expect(2) = 7.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 122 PARLSPNRTSKESVGNGQPGSPG 190
P R P E+ GQPGSPG
Sbjct: 216 PGRPGPPGPRGEAGPAGQPGSPG 238
Score = 22.6 bits (46), Expect(2) = 7.5
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +2
Query: 170 GQPGSPGVSPTPS--ASSLPQGSEKTISPIPSR 262
G PG+PG + TP G + P P+R
Sbjct: 253 GPPGAPGKNGTPGVRGEDAAPGPDAGYCPCPAR 285
>Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical
protein T23F6.5 protein.
Length = 575
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 376 LKAHLNTCKHDAVLCAAHCGAMIP--RVLMQDHLRYT-CPRRRANCEPATPSSRVARSRS 546
+++ + TC + CA A+ P +++Q H P+R NCE TP S R S
Sbjct: 52 IRSFVCTCHLSPIACANPQFAVHPYHTLVVQQHSNLQPIPQRLPNCESPTPPSLSCRDAS 111
>Z70309-12|CAB54293.3| 413|Caenorhabditis elegans Hypothetical
protein R102.4b protein.
Length = 413
Score = 27.5 bits (58), Expect = 8.4
Identities = 25/87 (28%), Positives = 40/87 (45%)
Frame = +2
Query: 116 SFPARLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPSRRSVKSFIPILS 295
+F R + + + S GNG S + TPSA + Q S KT + I R + +P +
Sbjct: 24 NFSIRGAMTKVNGNSNGNGISASTDLLDTPSAYT--QKSNKTHTSIDLRSDTVT-VPSVE 80
Query: 296 LRRR*WGRWCTASITKKDVSGQTSSAN 376
+RR +I DV G+ ++ N
Sbjct: 81 MRRA-----MAEAIVGDDVYGEDTTTN 102
>Z70309-11|CAB54291.3| 408|Caenorhabditis elegans Hypothetical
protein R102.4a protein.
Length = 408
Score = 27.5 bits (58), Expect = 8.4
Identities = 25/87 (28%), Positives = 40/87 (45%)
Frame = +2
Query: 116 SFPARLSPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPSRRSVKSFIPILS 295
+F R + + + S GNG S + TPSA + Q S KT + I R + +P +
Sbjct: 19 NFSIRGAMTKVNGNSNGNGISASTDLLDTPSAYT--QKSNKTHTSIDLRSDTVT-VPSVE 75
Query: 296 LRRR*WGRWCTASITKKDVSGQTSSAN 376
+RR +I DV G+ ++ N
Sbjct: 76 MRRA-----MAEAIVGDDVYGEDTTTN 97
>Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical
protein T05C12.6a protein.
Length = 672
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 134 SPNRTSKESVGNGQPGSPGVSPTPSASSLPQGSEKTISPIPSRRSV 271
+P++ + S+ NG G G PTP +S++ + SPI S+ +V
Sbjct: 612 APSQVTSSSLTNGSGGLGGPPPTPLSSTMVLAA----SPIQSQNAV 653
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 167 NGQPGSPGVSPTPSA--SSLPQGSEKTISPIPSR 262
NGQPG PG P A + GS+ P P+R
Sbjct: 240 NGQPGHPGQDGQPGAPGNDGAPGSDAAYCPCPAR 273
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +3
Query: 411 GAMCRALRRHDTAGAHAGPPPLHVPAAPGQLRACHTEFSGSALEEHQGNCGHEPIYC*NK 590
G+ C L + D+ ++ + + + G C +SGS +E + NC + +K
Sbjct: 242 GSTCELLEKEDSCASNPCSHGVCISFSGGFQCICDDGYSGSYCQEGKDNCVNNKCEAGSK 301
Query: 591 C 593
C
Sbjct: 302 C 302
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +1
Query: 367 LRKL--KAHLNTCKHDAVLCAAHCGAM 441
LRKL K NTCK D + AHCG +
Sbjct: 32 LRKLLYKCAENTCKPDILRVPAHCGKL 58
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +3
Query: 411 GAMCRALRRHDTAGAHAGPPPLHVPAAPGQLRACHTEFSGSALEEHQGNCGHEPIYC*NK 590
G+ C L + D+ ++ + + + G C +SGS +E + NC + +K
Sbjct: 242 GSTCELLEKEDSCASNPCSHGVCISFSGGFQCICDDGYSGSYCQEGKDNCVNNKCEAGSK 301
Query: 591 C 593
C
Sbjct: 302 C 302
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 137 PNRTSKESVGNGQPGSPGVSPTPSASSLP 223
P + + +V G PGSPG P LP
Sbjct: 226 PGKCDEVNVAQGPPGSPGPPGLPGPDGLP 254
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +1
Query: 367 LRKL--KAHLNTCKHDAVLCAAHCGAM 441
LRKL K NTCK D + AHCG +
Sbjct: 32 LRKLLYKCAENTCKPDILRVPAHCGKL 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,014,055
Number of Sequences: 27780
Number of extensions: 338492
Number of successful extensions: 1866
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1843
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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