Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0687
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   3.4  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   4.5  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   4.5  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   4.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   4.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   6.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.0  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 503 EFLYRCFNNQYISIIISLF 447
           +FLY CF++  + +I+S +
Sbjct: 143 QFLYNCFHSTLLLMILSRY 161


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 477 SIHQHHH 457
           SIHQHHH
Sbjct: 103 SIHQHHH 109


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 381 NHNKSRFISMLKAKFTAENISVEQANDDAD 470
           +HNK +    L AK+  + I  E+  D  D
Sbjct: 89  SHNKQQMWKELTAKYDPDGIYFEKYKDKFD 118


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 477 SIHQHHH 457
           SIHQHHH
Sbjct: 254 SIHQHHH 260


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 477 SIHQHHH 457
           SIHQHHH
Sbjct: 313 SIHQHHH 319


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 632 PPMWYYHQ 655
           PP WY HQ
Sbjct: 223 PPQWYQHQ 230


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 601 KPTNEIKLCWSSSSKQDE 548
           KPT   KL  SSS  +DE
Sbjct: 90  KPTTSFKLKDSSSDSEDE 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,108
Number of Sequences: 336
Number of extensions: 3610
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)