Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0687
         (743 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0345 - 28142434-28142658,28143087-28143158,28143252-281433...    67   2e-11
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707...    29   3.9  
12_02_0917 + 24281029-24281137,24281998-24282095,24282196-242823...    29   5.2  
05_01_0347 - 2717275-2717613,2717994-2718077,2718185-2718247,271...    28   6.8  
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600...    28   6.8  
03_02_0827 + 11582974-11583027,11583210-11584358                       28   6.8  
01_07_0001 + 40324322-40324737,40325921-40326051,40326872-40327563     28   6.8  

>02_05_0345 -
           28142434-28142658,28143087-28143158,28143252-28143371,
           28143483-28143674,28144919-28145017,28145448-28145594,
           28146310-28146513
          Length = 352

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = -1

Query: 734 WRGIRDDNLSSVSGIEGCIFCHSNGFIGGNTTLEGALKMAIASLE 600
           WRG+RDD LS+  GI GC+F H +GFIGGN T EGAL+MA A+++
Sbjct: 307 WRGLRDDELSNDIGIPGCVFVHMSGFIGGNKTYEGALEMARAAIK 351


>01_06_0670 +
           31069976-31070073,31070461-31070581,31070669-31070743,
           31070863-31071014,31071171-31071276,31071409-31071474,
           31071562-31071657,31071764-31071835,31071925-31072008,
           31072147-31072245,31072721-31072768,31072857-31072910,
           31072991-31073089,31073182-31073271,31073371-31073448,
           31073584-31073658,31073806-31073896,31074014-31074142,
           31074235-31074323
          Length = 573

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/57 (19%), Positives = 32/57 (56%)
 Frame = +1

Query: 82  INVDINNTNSTYIIDGGFLLHRVVWDSEETFNVILDKYVQYVRRHFGSRVTVVFDGY 252
           I +D+   N   + D  ++  R    + + ++ +LD+++  +++++G +V V F+ +
Sbjct: 210 ITIDVGTNNEDLLKDEFYIGLRQKRATGQEYSDLLDEFMAAIKQNYGQKVLVQFEDF 266


>12_02_0917 +
           24281029-24281137,24281998-24282095,24282196-24282372,
           24282490-24282590,24282684-24282759,24282843-24282902,
           24282999-24283195,24283296-24283392,24283478-24283564,
           24283925-24283983,24284535-24284626,24284706-24284783,
           24284891-24285051,24285303-24285530
          Length = 539

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 178 VILDKYVQYVRRHFGSRVTVVFDGYEII 261
           V++ +YV Y   H+  R+T +F+ Y ++
Sbjct: 203 VVVQQYVPYYFHHYHERITFLFERYSLL 230


>05_01_0347 -
           2717275-2717613,2717994-2718077,2718185-2718247,
           2718350-2718488,2719118-2719219,2719324-2719424,
           2719915-2719981,2720074-2720120,2720246-2720440,
           2720523-2720569,2721242-2721339,2722219-2722337,
           2722438-2722611
          Length = 524

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -1

Query: 500 FLYRCFNNQYISIIISLFNGYILSSKFCFQHRNKPRFIVII 378
           FLY  F +  + ++  L + YI+  K CF   +  R + I+
Sbjct: 198 FLYLFFTSTLLGVVAGLLSAYII-KKLCFARHSTDREVAIM 237


>04_04_0076 +
           22558105-22558261,22558356-22558405,22559837-22560044,
           22560112-22560237,22560469-22560567,22560729-22561405,
           22561483-22561731,22561808-22561936,22562021-22562089,
           22562183-22562256,22563086-22563098,22563361-22563468,
           22563541-22563651,22563725-22563811,22564043-22564068,
           22564840-22564906,22565123-22565212,22565295-22565387,
           22565515-22565604,22565699-22565761,22566349-22566447
          Length = 894

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 393 SRFISMLKAKFTAENISVEQANDDADVLIIETAIKKFSVQIQLL 524
           S + S    K TAE +  EQA+   D+ +  T +++ + QI LL
Sbjct: 40  STYGSFANLKITAEKLVKEQASVKTDLEMTHTKLRRATEQINLL 83


>03_02_0827 + 11582974-11583027,11583210-11584358
          Length = 400

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 273 KAAEQRRRNAASSTSSDIIFDESMTVP 353
           K AEQRR  AAS TS   +F E + +P
Sbjct: 5   KNAEQRRGEAASVTSRHRVFAEDLLLP 31


>01_07_0001 + 40324322-40324737,40325921-40326051,40326872-40327563
          Length = 412

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 351 PTSQQKFFANNHNKSRFISMLKAKFTAENISVEQANDDADVLIIETA 491
           P +    FAN+H  +RF S  +   TA ++S ++    A+V+  E A
Sbjct: 171 PLNPGNLFANHHGAARFTSYPQIFSTAASMSPQETKWPANVVKTEAA 217


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,227,532
Number of Sequences: 37544
Number of extensions: 344036
Number of successful extensions: 851
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)