Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0687
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83113-8|CAB05549.1|  340|Caenorhabditis elegans Hypothetical pr...    67   1e-11
Z81042-6|CAB02797.1|  340|Caenorhabditis elegans Hypothetical pr...    67   1e-11
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z82287-1|CAB05316.1|  366|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z83113-8|CAB05549.1|  340|Caenorhabditis elegans Hypothetical
           protein C27H6.8 protein.
          Length = 340

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = -1

Query: 740 SAWRGIRDDNLSSVSGIEGCIFCHSNGFIGGNTTLEGALKMAIASLEANE*N 585
           +AWRG+RDD+LS  SGI G +F H +GFIGGN T EGA+ MA  +LE  E N
Sbjct: 280 AAWRGLRDDDLSKESGIPGGVFVHISGFIGGNLTREGAIAMARKALEIGEEN 331


>Z81042-6|CAB02797.1|  340|Caenorhabditis elegans Hypothetical
           protein C27H6.8 protein.
          Length = 340

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = -1

Query: 740 SAWRGIRDDNLSSVSGIEGCIFCHSNGFIGGNTTLEGALKMAIASLEANE*N 585
           +AWRG+RDD+LS  SGI G +F H +GFIGGN T EGA+ MA  +LE  E N
Sbjct: 280 AAWRGLRDDDLSKESGIPGGVFVHISGFIGGNLTREGAIAMARKALEIGEEN 331


>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
            F54E4.1 protein.
          Length = 2948

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = -2

Query: 592  NEIKLCWSSSSKQDE*INILTNNNSCIC-TLNFFIAVSIINTSASSLACSTDIFSA-VNF 419
            +E+KL WS   K DE I  +TN N+     +     +    T  S L  +TDIF+  + F
Sbjct: 1961 DELKLDWSDEEKDDEEIEEVTNENTVDAPVIQNGAGIENAATLQSQLVGATDIFAQHMKF 2020

Query: 418  AFNIEINLDLL*LFAKNF 365
              ++ I  + L   A  F
Sbjct: 2021 VASLRILTEELSTLASGF 2038


>Z82287-1|CAB05316.1|  366|Caenorhabditis elegans Hypothetical
           protein ZK550.1 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -1

Query: 500 FLYRCFNNQYISIIISLFNGYILSSKFCFQHRNKPRFIVIICKEFLL 360
           FLY C+ N+     I+ F  Y+L      +H +K  F   +   FL+
Sbjct: 75  FLYFCYGNEIAHFFINGFGSYLLMISVLPKHVHKAVFSFAMAYLFLV 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,325,308
Number of Sequences: 27780
Number of extensions: 325838
Number of successful extensions: 873
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)