Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0687
         (743 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g41970.1 68418.m05110 expressed protein contains Pfam profile...    60   2e-09
At3g49320.1 68416.m05392 expressed protein contains Pfam profile...    58   6e-09
At4g26690.1 68417.m03846 glycerophosphoryl diester phosphodieste...    33   0.26 
At2g27315.1 68415.m03283 hypothetical protein                          31   1.1  
At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putativ...    28   5.7  
At3g45650.1 68416.m04931 proton-dependent oligopeptide transport...    28   7.5  
At2g36430.1 68415.m04472 expressed protein contains Pfam profile...    28   7.5  
At4g22710.1 68417.m03276 cytochrome P450 family protein contains...    27   9.9  

>At5g41970.1 68418.m05110 expressed protein contains Pfam profile
           PF03690: Uncharacterised protein family (UPF0160)
          Length = 346

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = -1

Query: 734 WRGIRDDNLSSVSGIEGCIFCHSNGFIGGNTTLEGALKMAIASL 603
           WRG+RD+ LS  + I GC+F H +GFIGGN + +GAL MA  +L
Sbjct: 301 WRGLRDEELSKAAEIPGCVFVHMSGFIGGNQSYDGALSMAQTAL 344


>At3g49320.1 68416.m05392 expressed protein contains Pfam profile
           PF03690: Uncharacterised protein family (UPF0160)
          Length = 354

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 27/47 (57%), Positives = 31/47 (65%)
 Frame = -1

Query: 737 AWRGIRDDNLSSVSGIEGCIFCHSNGFIGGNTTLEGALKMAIASLEA 597
           AWRG+  + LS  S I  C+F H +GFIG N T EGAL MA ASL A
Sbjct: 308 AWRGLEKEKLSEESSIPRCVFVHMSGFIGANQTYEGALAMARASLMA 354


>At4g26690.1 68417.m03846 glycerophosphoryl diester
           phosphodiesterase family protein weak similarity to
           glycerophosphodiester phosphodiesterase [Borrelia
           hermsii] GI:1399038; contains Pfam profile PF03009:
           Glycerophosphoryl diester phosphodiesterase family
          Length = 759

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
 Frame = +1

Query: 88  VDINNTNSTYIID-GGFLLHRVVWDSEETFNVILDKYVQYVRRHFGSRVTVVFDGYEIIR 264
           V I +TNS+ ++D      +  V+  EE    ILD  ++ +++   + V      + + +
Sbjct: 534 VMIQSTNSSVLVDFKKQSQYETVYKVEENIRDILDSAIEDIKKFADAVVIQKLSVFPVAQ 593

Query: 265 EILKQQSNAVEMLLHQLLLILYSMNQ*QFL 354
             +  Q+N VE L    L +   + Q +FL
Sbjct: 594 SFITTQTNVVEKLQKSQLPVYVELFQNEFL 623


>At2g27315.1 68415.m03283 hypothetical protein
          Length = 120

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 710 LSSVSGIEGCIFCHSNGFIGGN-TTLEGALKMAIASLEAN 594
           +SS+S +EGC+   S     G    +EGA   A ++L+AN
Sbjct: 50  MSSLSNVEGCVLEISKSIFSGKFENIEGACCKAFSALDAN 89


>At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putative
           identical to betaine-aldehyde dehydrogenase, chloroplast
           precursor (BADH) [Arabidopsis thaliana]
           SWISS-PROT:Q9S795; strong similarity to betaine aldehyde
           dehydrogenase [Amaranthus hypochondriacus] GI:2388710
          Length = 501

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 10  PLTLFDDIGMRKTQKSAIYDCFQTINVDINNTNSTYII 123
           PL +FDD+ + K  + A++ CF T N  I +  S  ++
Sbjct: 266 PLIVFDDVDLDKAAEWALFGCFWT-NGQICSATSRLLV 302


>At3g45650.1 68416.m04931 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 558

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 279 AEQRRRNAASSTSSDIIFDESMTVPTSQQKFF 374
           A  R+R A  ST+     +ES+T+PT   +FF
Sbjct: 250 AALRKRKAVVSTNEKDYHNESITMPTKSFRFF 281


>At2g36430.1 68415.m04472 expressed protein contains Pfam profile
           PF03140: Plant protein of unknown function
          Length = 448

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 13  LTLFDDIGMRKTQKSAIYDCF-QTINVDINNTNSTYIIDGGFLL 141
           LTL D +   K  +    +C+ +TI++D    N   ++DG FLL
Sbjct: 100 LTLEDYMKSVKNVEEVARECYSETIHMDSEEFNEMMVLDGCFLL 143


>At4g22710.1 68417.m03276 cytochrome P450 family protein contains
           Pfam profile: PF00067 cytochrome p450
          Length = 526

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 172 FNVILDKYVQYVRRHFGSRVTVVFDGYEIIREILK 276
           F  +  KY   ++ H GS++ +V    ++ RE+LK
Sbjct: 78  FQALTLKYGPLMKIHLGSKLAIVVSSPDMAREVLK 112


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,161,171
Number of Sequences: 28952
Number of extensions: 295119
Number of successful extensions: 766
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)