Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0683
(692 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 113 2e-27
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 26 0.30
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 3.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 3.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 3.6
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 21 8.4
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 8.4
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 113 bits (271), Expect = 2e-27
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = +3
Query: 69 KNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTMWVYEEIIEGKKLTEIINETHENVK 248
K ++CIVGSGNWGS IAKI+G NAA+ SNFEDRVTM+VYEEII GKKLTEIINETHENVK
Sbjct: 4 KLRICIVGSGNWGSTIAKIIGINAANFSNFEDRVTMYVYEEIINGKKLTEIINETHENVK 63
Query: 249 Y 251
Y
Sbjct: 64 Y 64
Score = 103 bits (247), Expect = 2e-24
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +2
Query: 257 GHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKGFD 430
GHKLP N++A+PDVVEAAKDAD+L FVVPHQF++ ICS L GKIKPTA LSLIKGFD
Sbjct: 67 GHKLPPNIIAIPDVVEAAKDADILTFVVPHQFIKRICSALFGKIKPTAIGLSLIKGFD 124
Score = 62.9 bits (146), Expect = 3e-12
Identities = 24/39 (61%), Positives = 34/39 (87%)
Frame = +3
Query: 507 GANIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDYFR 623
GAN+ASEVA E FCETTIGC+D +AP+++D+++T YF+
Sbjct: 151 GANLASEVANEMFCETTIGCKDKNMAPILKDLMETSYFK 189
Score = 33.9 bits (74), Expect = 0.001
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 436 RSGGIDLISHIITRCLKIPCAVLM 507
+ GGI+LISHII++ L IP +VLM
Sbjct: 127 QGGGIELISHIISKQLHIPVSVLM 150
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 26.2 bits (55), Expect = 0.30
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 205 FPSIISSYTHIVTLSSKFDRLAAFRPTIFAIAEPQFP 95
F S+ ++ T S F ++ A PT+F+ P+FP
Sbjct: 332 FWSLRKAFARKKTDYSSFGKILATEPTLFSNVTPKFP 368
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 557 HWLSGRNAGSVNAGY 601
HW SG N G+ GY
Sbjct: 1423 HWKSGHNGGASLTGY 1437
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 557 HWLSGRNAGSVNAGY 601
HW SG N G+ GY
Sbjct: 1419 HWKSGHNGGASLTGY 1433
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 208 FFPSIISSYTHIVTLSSKFDRL 143
FF + SY HI T S++F R+
Sbjct: 99 FFVNEKQSYFHIATTSNEFIRI 120
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 208 FFPSIISSYTHIVTLSSKFDRL 143
FF + SY HI T S++F R+
Sbjct: 99 FFVNEKQSYFHIATTSNEFIRI 120
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 208 FFPSIISSYTHIVTLSSKFDRL 143
FF + SY HI T S++F R+
Sbjct: 38 FFVNEKQSYFHIATTSNEFIRI 59
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 21.4 bits (43), Expect = 8.4
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Frame = +3
Query: 441 WWHRSYITYYYKMPK----NSLCCINGANIASEVAEEKFCETT 557
WW I Y+ +P NS+ I + EEK E T
Sbjct: 72 WWDHKGIVYFELLPPNRTINSVVYIEHLTKLNNAIEEKRFELT 114
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 8.4
Identities = 5/12 (41%), Positives = 6/12 (50%)
Frame = +1
Query: 610 QTTSGSWWWTMR 645
Q WWW M+
Sbjct: 360 QNEMNKWWWNMK 371
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,127
Number of Sequences: 438
Number of extensions: 3386
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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