Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0682
         (477 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   4.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   4.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   4.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   4.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   4.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   5.8  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 13  HF*NN*KP*SNHTFIHHL 66
           HF N+  P  NH F  HL
Sbjct: 69  HFDNSVTPMVNHDFTQHL 86


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -3

Query: 331 YHWHYHL 311
           +HWH+HL
Sbjct: 206 HHWHWHL 212


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -3

Query: 331 YHWHYHL 311
           +HWH+HL
Sbjct: 206 HHWHWHL 212


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 13  HF*NN*KP*SNHTFIHHL 66
           HF N+  P  NH F  HL
Sbjct: 69  HFDNSVTPMVNHDFTQHL 86


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 134 NFYATSTKEHITL*IKGHYLGPIKWW 57
           NF     ++ I   +K H+ G +K W
Sbjct: 73  NFATKKLEQFIVRFMKYHFFGTLKLW 98


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 13  HF*NN*KP*SNHTFIHHL 66
           HF N+  P  NH F  HL
Sbjct: 69  HFDNSVTPMVNHDFTQHL 86


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 114 GTGCIKIQICD-WDQFN*IKISFI 182
           GTGC++I+I   W +F  + +S +
Sbjct: 751 GTGCVRIKITGVWLKFLRVILSVV 774


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,154
Number of Sequences: 336
Number of extensions: 2118
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)