Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0682
         (477 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   1.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   5.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.8  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   9.0  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      21   9.0  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 395 WCYFDTNAISWLNII 351
           +CYF  NA +W N +
Sbjct: 538 FCYFRRNAATWKNAV 552


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -3

Query: 331 YHWHYHL 311
           +HWH+HL
Sbjct: 208 HHWHWHL 214


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 470 KN*AIVDIHTHSES 429
           KN  IVD HT SES
Sbjct: 355 KNVTIVDHHTASES 368


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -3

Query: 313 LTSFLRMSAYDSNAKIIRLL*SITNSFSQTIL 218
           +  FL+    DSN +++  + SI  ++++ IL
Sbjct: 23  IVGFLKKGPLDSNVEVVVGVPSIYLTYAKNIL 54


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 133 FKFVIGISLIKLKFHLFSLEMCPLES 210
           F FV+ + +I  K    S +M PLE+
Sbjct: 17  FSFVVILLIIPSKCEAVSNDMQPLEA 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,690
Number of Sequences: 438
Number of extensions: 2149
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)