Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0681
         (508 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_46428| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.8  
SB_44428| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.8  
SB_41352| Best HMM Match : MIB_HERC2 (HMM E-Value=3.1)                 28   3.8  
SB_23576| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.8  
SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24)          27   8.9  

>SB_46428| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 241

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 258 VKKMEFEEGLMSDTWTAPNELMEIFSMDQDYLDFLEES 371
           +++   E+ L +  W A +E ME     + YLD+L++S
Sbjct: 66  IEQQMLEDKLRATDWEATDEAMEEAVARESYLDWLQDS 103


>SB_44428| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 131

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 258 VKKMEFEEGLMSDTWTAPNELMEIFSMDQDYLDFLEES 371
           +++   E+ L +  W A +E ME     + YLD+L++S
Sbjct: 66  IEQQMLEDKLRATDWEATDEAMEEAVARESYLDWLQDS 103


>SB_41352| Best HMM Match : MIB_HERC2 (HMM E-Value=3.1)
          Length = 271

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 258 VKKMEFEEGLMSDTWTAPNELMEIFSMDQDYLDFLEES 371
           +++   E+ L +  W A +E ME     + YLD+L++S
Sbjct: 206 IEQQMLEDKLRATDWEATDEAMEEAVARESYLDWLQDS 243


>SB_23576| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 248

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 258 VKKMEFEEGLMSDTWTAPNELMEIFSMDQDYLDFLEES 371
           +++   E+ L +  W A +E ME     + YLD+L++S
Sbjct: 144 IEQQMLEDKLRATDWEATDEAMEEAVARESYLDWLQDS 181


>SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24)
          Length = 1001

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 375  ELTPRENPNSPGPWRRSP 322
            E+ PRENP SP  W   P
Sbjct: 976  EVEPRENPKSPDEWLFGP 993


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,480,886
Number of Sequences: 59808
Number of extensions: 275915
Number of successful extensions: 528
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)