Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0678
(551 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 168 9e-41
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 155 6e-37
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 146 3e-34
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 140 1e-32
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 136 4e-31
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 130 2e-29
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 106 3e-22
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 105 5e-22
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 86 4e-16
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 77 3e-13
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 77 4e-13
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 75 8e-13
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 75 1e-12
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 75 1e-12
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 73 6e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 73 6e-12
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 69 5e-11
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 69 1e-10
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 68 1e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 68 1e-10
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 67 2e-10
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 67 2e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 7e-10
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 66 7e-10
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 62 8e-09
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 62 8e-09
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 60 3e-08
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 60 4e-08
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 60 4e-08
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 59 8e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 1e-07
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 58 1e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 3e-07
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 56 5e-07
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 55 1e-06
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 54 3e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 5e-06
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 52 9e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 1e-05
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 51 2e-05
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 49 6e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 49 6e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 6e-05
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 49 6e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 8e-05
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 1e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 1e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 3e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 6e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 8e-04
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 46 8e-04
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 45 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.001
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.002
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.002
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.003
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.004
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 43 0.005
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.005
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.017
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.017
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 40 0.051
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.20
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.20
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.20
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.27
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.27
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.36
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 36 0.47
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.63
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.63
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 36 0.83
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 0.83
UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Sl... 35 1.1
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.4
UniRef50_Q0RU84 Cluster: Putative oxidoreductase; n=1; Frankia a... 34 1.9
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 1.9
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 3.3
UniRef50_A6DTI5 Cluster: Probable sulfatase; n=1; Lentisphaera a... 33 3.3
UniRef50_A7PL28 Cluster: Chromosome chr7 scaffold_20, whole geno... 33 3.3
UniRef50_UPI00004996D6 Cluster: protein kinase; n=2; Entamoeba h... 33 4.4
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.4
UniRef50_Q9RY83 Cluster: Putative uncharacterized protein; n=2; ... 33 5.8
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 32 7.7
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 168 bits (408), Expect = 9e-41
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAI
Sbjct: 96 FFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAI 155
Query: 437 ILAKLSVLPVRRGYWGNKIGKPHT 508
ILAKLS++PVRRGYWGNKIGKPHT
Sbjct: 156 ILAKLSIVPVRRGYWGNKIGKPHT 179
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EII
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEII 94
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 155 bits (376), Expect = 6e-37
Identities = 73/84 (86%), Positives = 76/84 (90%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
FFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAIRGAI
Sbjct: 36 FFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAI 95
Query: 437 ILAKLSVLPVRRGYWGNKIGKPHT 508
ILAKLS++PV RGYWGNKIGKPHT
Sbjct: 96 ILAKLSIVPVCRGYWGNKIGKPHT 119
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +3
Query: 153 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
+PVTKLG L+ + KI LE IYLFSLPIKE EII
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEII 34
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 146 bits (354), Expect = 3e-34
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAI
Sbjct: 70 YFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAI 128
Query: 437 ILAKLSVLPVRRGYWGNKIGKPHT 508
I+ KLS++P+RRGYWG +G PHT
Sbjct: 129 IMGKLSIMPIRRGYWGTALGDPHT 152
Score = 67.7 bits (158), Expect = 2e-10
Identities = 27/41 (65%), Positives = 37/41 (90%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIV 68
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 140 bits (340), Expect = 1e-32
Identities = 66/76 (86%), Positives = 71/76 (93%)
Frame = +2
Query: 281 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 460
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 461 PVRRGYWGNKIGKPHT 508
P+R+GYWGNKIGKP+T
Sbjct: 108 PLRQGYWGNKIGKPNT 123
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 136 bits (328), Expect = 4e-31
Identities = 64/103 (62%), Positives = 82/103 (79%), Gaps = 3/103 (2%)
Frame = +2
Query: 209 EHLLVFFTNQRIRDHYF---FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGH 379
EH+ +F + I++H F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGH
Sbjct: 69 EHIFLF--SLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGH 126
Query: 380 IGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 508
IGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+G+PHT
Sbjct: 127 IGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 60.1 bits (139), Expect = 3e-08
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +3
Query: 135 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I+
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIV 84
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 130 bits (315), Expect = 2e-29
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = +2
Query: 269 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 448
P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AK
Sbjct: 74 PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAK 133
Query: 449 LSVLPVRRGYWGNKIGKPHT 508
LSV+P+RRGYWG +G+PH+
Sbjct: 134 LSVIPIRRGYWGTNLGQPHS 153
Score = 60.9 bits (141), Expect = 2e-08
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +3
Query: 138 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+II
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQII 69
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 106 bits (255), Expect = 3e-22
Identities = 49/81 (60%), Positives = 58/81 (71%)
Frame = +2
Query: 266 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 445
G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI A
Sbjct: 60 GNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARA 119
Query: 446 KLSVLPVRRGYWGNKIGKPHT 508
K ++ PVR G W GKPHT
Sbjct: 120 KCAIRPVRLGLWDGAQGKPHT 140
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIV 55
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 105 bits (253), Expect = 5e-22
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +2
Query: 332 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 508
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHT
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHT 119
Score = 33.5 bits (73), Expect = 3.3
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 138 DQKEWVPVTKLGRLVREGKI 197
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 86.2 bits (204), Expect = 4e-16
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 388
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 71 FFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 65.7 bits (153), Expect = 7e-10
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EII
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEII 69
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 77.0 bits (181), Expect = 3e-13
Identities = 45/87 (51%), Positives = 55/87 (63%)
Frame = +2
Query: 260 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 439
FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I+ II
Sbjct: 85 FLGAALKDEVLKSLPEQKGTRVGQY--YKA----GDYNGHVITGLD---EVANTIQRVII 135
Query: 440 LAKLSVLPVRRGYWGNKIGKPHTSLAR 520
L KL ++PV RGY G+K KPHT L +
Sbjct: 136 LTKLPIVPVWRGYCGSKTSKPHTVLCK 162
Score = 39.5 bits (88), Expect = 0.051
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +3
Query: 156 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
P +KLG LV++ +I L IYLFSLPIKE EII
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEII 82
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 76.6 bits (180), Expect = 4e-13
Identities = 37/96 (38%), Positives = 62/96 (64%)
Frame = +2
Query: 221 VFFTNQRIRDHYFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 400
+FF N ++ + F G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNKLVNILF--GKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 401 SKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 508
S + I+ A+ AKL++ +RRGYW + GKP+T
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNT 185
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 75.4 bits (177), Expect = 8e-13
Identities = 41/77 (53%), Positives = 50/77 (64%)
Frame = +2
Query: 290 LKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR 469
++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGAIIL + S+
Sbjct: 13 IRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGAIILDRSSIAIAW 66
Query: 470 RGYWGNKIGKPHTSLAR 520
G+ GNKI KPHT R
Sbjct: 67 GGWSGNKIAKPHTVSCR 83
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 74.5 bits (175), Expect = 1e-12
Identities = 39/85 (45%), Positives = 57/85 (67%)
Frame = -2
Query: 508 GVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCAL 329
GV + LVTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L
Sbjct: 23 GVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTL 82
Query: 328 SGTCLFLYRHDLKNLIIQGRSEEEI 254
+GT L L HDL++ ++Q ++EEI
Sbjct: 83 TGTGLLLDGHDLQHFVLQRAAQEEI 107
Score = 33.9 bits (74), Expect = 2.5
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -1
Query: 254 NDLEFFDW*RKQVNALEFVDFSFANKTAEFGDRNPLFLVFL 132
+DLE F+ R QV+ L+ D + A++ + G NP VFL
Sbjct: 108 DDLELFNGQRVQVDLLQGADLAIAHQATQLGHWNPFLRVFL 148
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 74.5 bits (175), Expect = 1e-12
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 385
FFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 24 FFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 35.5 bits (78), Expect = 0.83
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +3
Query: 192 KIDKLESIYLFSLPIKEFEII 254
KI LE IYLFSLPIKE EII
Sbjct: 2 KIKSLEEIYLFSLPIKESEII 22
Score = 35.1 bits (77), Expect = 1.1
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +1
Query: 364 RQQRSYWFGCEVQQGSRHCHSRRYYPC*AVSSTSPKRLLG*QDRKATHLP 513
R Y EV QG H R ++P A+ +RLLG QDR+A H P
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRP 108
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 72.5 bits (170), Expect = 6e-12
Identities = 37/78 (47%), Positives = 55/78 (70%)
Frame = -2
Query: 508 GVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCAL 329
GV L+ + TPVTSSDW N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L
Sbjct: 104 GVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSL 163
Query: 328 SGTCLFLYRHDLKNLIIQ 275
+ + L L R D+ N I+Q
Sbjct: 164 TSSGLLLDRLDVHNFILQ 181
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 72.5 bits (170), Expect = 6e-12
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +2
Query: 269 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 448
P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AK
Sbjct: 55 PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAK 114
Query: 449 LSVLPVR--RGYWGNKIGKPHT 508
LS++ VR G W G PH+
Sbjct: 115 LSLIKVRVGCGSWECGCGSPHS 136
Score = 34.7 bits (76), Expect = 1.4
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
K + + W P T++GR+V+EG I + I LP+ E EI+
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIV 50
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 69.3 bits (162), Expect = 5e-11
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 260 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 439
+L P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A AI+ AI
Sbjct: 41 YLIPDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAID 100
Query: 440 LAKLSVLPVRR--GYWGNKIGKPHT 508
AKL+++ ++R G W GKPHT
Sbjct: 101 NAKLNIIEIKRGCGSWECGCGKPHT 125
Score = 39.5 bits (88), Expect = 0.051
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 144 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
+EW P T+LGRLV G+I + LP+KE++I+
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIV 39
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = +2
Query: 269 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 448
P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA+ IR AI AK
Sbjct: 31 PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVASTIRKAIDKAK 90
Query: 449 LSVLPVRR--GYWGNKIGKPHTSL 514
L+++PV R G W + G P TS+
Sbjct: 91 LNMIPVMRGNGSWESG-GGPGTSV 113
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 68.1 bits (159), Expect = 1e-10
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +2
Query: 239 RIRDHYFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 418
+I DH+ +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 96 QIVDHFL---KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQG 152
Query: 419 AIR 427
AI+
Sbjct: 153 AIQ 155
Score = 59.7 bits (138), Expect = 4e-08
Identities = 24/38 (63%), Positives = 34/38 (89%)
Frame = +3
Query: 141 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIV 98
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 68.1 bits (159), Expect = 1e-10
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +2
Query: 269 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 448
P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK
Sbjct: 52 PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAK 111
Query: 449 LSVLPVRR--GYWGNKIGKPHT 508
++++PVRR G W G+PH+
Sbjct: 112 MNIIPVRRGCGSWQCTCGEPHS 133
Score = 40.3 bits (90), Expect = 0.029
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 144 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
+EW P T +G LV+EGKI ++ ++ +LPI E EI+
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIV 47
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 67.3 bits (157), Expect = 2e-10
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +2
Query: 278 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 457
N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL++
Sbjct: 62 NQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNI 121
Query: 458 LPVRR--GYWGNKIGKPHT 508
+ ++R G W + +PH+
Sbjct: 122 IEIKRGCGSWECRCRRPHS 140
Score = 38.3 bits (85), Expect = 0.12
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +3
Query: 147 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
EW P TKLG +V+EG+I + I+ IKE EII
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEII 50
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 67.3 bits (157), Expect = 2e-10
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +2
Query: 263 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 442
L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI+ AI +
Sbjct: 44 LVPDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDI 103
Query: 443 AKLSVLPVRR--GYWGNKIGKPHTSLARS 523
AKL+++ V R G W G+PHT R+
Sbjct: 104 AKLNIIDVSRGCGSWECGCGRPHTVALRT 132
Score = 37.1 bits (82), Expect = 0.27
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 150 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
W P T+LG+ V EG+ID ++ LP+KE E++
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVV 41
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 7e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +2
Query: 308 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 451
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 65.7 bits (153), Expect = 7e-10
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EII
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEII 94
Score = 60.1 bits (139), Expect = 3e-08
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 346
FFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 96 FFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 62.1 bits (144), Expect = 8e-09
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
FFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V TA+ +
Sbjct: 28 FFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSS 85
Query: 437 ILAKL-SVLPVRRGYWGNKIGKPHTSLARSPASV 535
+ L S LP R Y GN I KP R+ S+
Sbjct: 86 WSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSI 117
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 62.1 bits (144), Expect = 8e-09
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +2
Query: 269 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 448
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAY 144
Query: 449 LSVLPVRRG 475
L+V P++ G
Sbjct: 145 LNVNPIKMG 153
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/69 (42%), Positives = 45/69 (65%)
Frame = +2
Query: 269 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 448
P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI+ AI +AK
Sbjct: 97 PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAK 156
Query: 449 LSVLPVRRG 475
L+++ V RG
Sbjct: 157 LNIIEVDRG 165
Score = 35.9 bits (79), Expect = 0.63
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 150 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
W P T+LGR V+ G I +E LP+KE EI+
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIV 92
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 59.7 bits (138), Expect = 4e-08
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
F LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+ A+
Sbjct: 157 FLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTN 216
Query: 437 ILAKLSV 457
+L+ + V
Sbjct: 217 VLSIILV 223
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 59.7 bits (138), Expect = 4e-08
Identities = 39/84 (46%), Positives = 45/84 (53%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
FFLG L DEVL+ M Q Q RTR K F + + L V CSKEV TA + AI
Sbjct: 55 FFLGEHLKDEVLRTMLAQNQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAI 108
Query: 437 ILAKLSVLPVRRGYWGNKIGKPHT 508
L + + GY GNKIG PHT
Sbjct: 109 TLLSF-LFSTQTGYKGNKIGNPHT 131
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 58.8 bits (136), Expect = 8e-08
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EII
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEII 94
Score = 52.8 bits (121), Expect = 5e-06
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 346
FFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 96 FFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 239
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +2
Query: 269 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 448
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQAL 125
Query: 449 LSVLPVRRG 475
L+V P++ G
Sbjct: 126 LNVGPIKLG 134
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 3e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 266 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 445
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 446 KLSVL--PVRRGY 478
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 56.0 bits (129), Expect = 5e-07
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +2
Query: 302 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 481
P+ KQT Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATG 147
Query: 482 GNKIGKPH 505
G ++ +PH
Sbjct: 148 GKRL-EPH 154
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +3
Query: 141 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIISSSDRP 275
+ +W+P+TKLG LV+E KI LE IY FSL + + S + P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +2
Query: 308 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYW 481
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V R G W
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSW 131
Query: 482 GNKIGKPHT 508
G PH+
Sbjct: 132 ECACGAPHS 140
Score = 41.1 bits (92), Expect = 0.017
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 144 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
+EW P TKLGRLV+EGKI ++ I I+E EI+
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIV 41
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 53.6 bits (123), Expect = 3e-06
Identities = 33/88 (37%), Positives = 46/88 (52%)
Frame = +2
Query: 269 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 448
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 449 LSVLPVRRGYWGNKIGKPHTSLARSPAS 532
+ VR G I PH ++ R AS
Sbjct: 73 KQL--VRIPITGTTI--PHDTIGRFGAS 96
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 5e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +2
Query: 275 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 454
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 455 VLPV 466
++ V
Sbjct: 72 LISV 75
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 52.0 bits (119), Expect = 9e-06
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = +3
Query: 150 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIV 69
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +2
Query: 272 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 451
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 452 SVLPVRR 472
+++ V++
Sbjct: 108 NLIKVKQ 114
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 50.8 bits (116), Expect = 2e-05
Identities = 31/56 (55%), Positives = 35/56 (62%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 424
FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+ ATAI
Sbjct: 95 FFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI 146
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 49.2 bits (112), Expect = 6e-05
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
F L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+ A+ I
Sbjct: 23 FLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELLIAVCRTI 82
Query: 437 IL 442
IL
Sbjct: 83 IL 84
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 49.2 bits (112), Expect = 6e-05
Identities = 22/67 (32%), Positives = 41/67 (61%)
Frame = +2
Query: 266 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 445
G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A++ A
Sbjct: 510 GENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRALVDA 569
Query: 446 KLSVLPV 466
K SV+ V
Sbjct: 570 KKSVVRV 576
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 6e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +2
Query: 275 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 454
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 455 VLPVR 469
+ V+
Sbjct: 138 MYKVK 142
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 49.2 bits (112), Expect = 6e-05
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +2
Query: 161 HQTRPSCSRRKNRQTREHLLVFFT--NQRIRDHYFFLGPSLNDEVLKIMPVQKQTRAGQR 334
++T + N QT+ F N+R + F ++V+ I V K T+ G+
Sbjct: 3 NKTEVVVAENANNQTQPERKKFDRKPNRRPQGPKQFQKDDFEEKVVTIRRVTKVTKGGRH 62
Query: 335 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 466
RF A V +GD G +GLG + EV AI+ A+ AK +++ V
Sbjct: 63 FRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVKEAKKNLIRV 106
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 8e-05
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +2
Query: 281 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 460
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 461 PV 466
+
Sbjct: 71 KI 72
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 281 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 460
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 461 PV 466
V
Sbjct: 77 EV 78
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 48.0 bits (109), Expect = 1e-04
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Frame = +2
Query: 281 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 460
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 461 --PVRRGYWGNKI-GKPHTS 511
PV G ++I G+ TS
Sbjct: 79 TVPVENGTIPHEIVGENSTS 98
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +2
Query: 281 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 460
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 461 PV 466
V
Sbjct: 209 QV 210
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 6e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 281 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 433
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 8e-04
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +2
Query: 281 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 460
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 461 PV 466
V
Sbjct: 246 TV 247
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.6 bits (103), Expect = 8e-04
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = +2
Query: 233 NQRIRDHYFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 412
N+R +H G L D V+ I V K + G+ F A V +GD NG +G+G S+EV
Sbjct: 35 NRREENH----GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREV 90
Query: 413 ATAIRGAIILAKLSVLPVRR 472
AI + AK + V R
Sbjct: 91 PAAIAKGQLDAKKHMFSVPR 110
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 45.2 bits (102), Expect = 0.001
Identities = 17/33 (51%), Positives = 27/33 (81%)
Frame = +3
Query: 156 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
PVTKLGRLV++GK+ ++ I+ F + IKE++I+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIV 68
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 275 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 388
L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 75 LKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 266 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 445
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 446 KLSVL--PVRRG 475
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 281 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 454
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 455 VLPVRRG 475
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +2
Query: 281 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 460
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 461 PVRRGYWGNKIGK-PHTSLARSPASVV 538
V NKI PH S A+ V
Sbjct: 128 RVPL----NKINSIPHPMSGSSGAANV 150
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +2
Query: 278 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 457
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 458 LPV 466
+ +
Sbjct: 91 VKI 93
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.004
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 275 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 454
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 455 VLPV 466
V+ V
Sbjct: 88 VIRV 91
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 42.7 bits (96), Expect = 0.005
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = -2
Query: 253 MISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 137
MI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 15 MIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.005
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 281 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 460
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 461 PV 466
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.017
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 281 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 460
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 461 PV 466
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.017
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 275 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 448
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 39.5 bits (88), Expect = 0.051
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = +2
Query: 140 PERVGSCHQTRPSCSRRKNRQTREHLLVFFTNQRIRDHYFFLGPS--LNDEVLKIMPVQK 313
P+ G+ + T S KN + ++ TN + P ++++ I V
Sbjct: 42 PDHKGTINTTPNDNSTSKNSKDKDFKFKKKTNSQNFKKNANKKPEKEFEEKIVNIARVTN 101
Query: 314 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 493
+ G+R F A V +GD G +G G + EV AI+ A+ A+ +++ V NK
Sbjct: 102 VVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRVP---IINKS 158
Query: 494 GKPHTSLARSPASVV 538
PH A+ AS V
Sbjct: 159 TVPHEQWAKFLASKV 173
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.20
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 305 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 472
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.20
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 275 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 427
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.20
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 275 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 454
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 455 VLPVRR 472
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.27
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 436 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 338
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.27
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 275 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 427
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.36
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 275 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 454
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 455 VLPV 466
++ V
Sbjct: 81 MVRV 84
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 36.3 bits (80), Expect = 0.47
Identities = 22/83 (26%), Positives = 44/83 (53%)
Frame = +2
Query: 212 HLLVFFTNQRIRDHYFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 391
++ + N ++ + L ++ +++++I + + G+ R+K + +G+ G IGLG
Sbjct: 77 YIYKYNNNIKLNNSIIKLNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLG 136
Query: 392 VKCSKEVATAIRGAIILAKLSVL 460
V SK + I AII AK+ L
Sbjct: 137 V--SKNI--NINKAIISAKIKAL 155
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 0.63
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 278 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 427
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.63
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 287 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 466
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 35.5 bits (78), Expect = 0.83
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 344 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT--SLA 517
++ V IG + H G + +++VA A+RG + L V GYW + G ++A
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTVA 61
Query: 518 RSPASVVP 541
S +VVP
Sbjct: 62 YSDVTVVP 69
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 0.83
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 305 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 472
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein -
Dictyostelium discoideum (Slime mold)
Length = 766
Score = 35.1 bits (77), Expect = 1.1
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Frame = -2
Query: 538 NHTCR*PCKGGVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTV-VVA 362
NH CR +GG+ L + T + + N ++ SA+ +FL T T + +++
Sbjct: 647 NHWCR--FRGGI-LKFPKDKQTPNTY-NKEIGSLFSANGSIKNFLMWSSTTTQVIEEILS 702
Query: 361 NGNK---CLETCALSGTCLF-LYRHDLKNLIIQGRSEEEI-MISNSLIGKEN 221
+GNK C ET A+ TC F Y DL LI Q + E I N+ I +N
Sbjct: 703 SGNKTITCFETSAIDNTCNFDKYLLDLNRLINQYQHIERFDFIKNTYIYAKN 754
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.1
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 272 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 451
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 452 SVLPVRR 472
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 1.4
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 260 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 424
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q0RU84 Cluster: Putative oxidoreductase; n=1; Frankia alni
ACN14a|Rep: Putative oxidoreductase - Frankia alni
(strain ACN14a)
Length = 307
Score = 34.3 bits (75), Expect = 1.9
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 383 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTSLARSPASVVP 541
G V+ EV G +LA +V G W ++ P TS+AR PA+V P
Sbjct: 71 GTVVETGAEVTDLAPGTQVLAMSAVALTGVGTWSERVCLPRTSVARLPANVDP 123
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 1.9
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 272 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 451
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 452 SVLPVRR 472
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 33.5 bits (73), Expect = 3.3
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -2
Query: 322 TCLFLYR-HDLKNLIIQGRSEEEI--MISNSLIGKENK*MLSSLSIFP-SRT 179
TCLF R HDL +LI++G S+EEI I ++ KE + + P SRT
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIADRIRYAVENKEQRHHIGEADFMPASRT 332
>UniRef50_A6DTI5 Cluster: Probable sulfatase; n=1; Lentisphaera
araneosa HTCC2155|Rep: Probable sulfatase - Lentisphaera
araneosa HTCC2155
Length = 483
Score = 33.5 bits (73), Expect = 3.3
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 135 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIISSSDRP*MMRFLRSCLYRN 314
+D K W+PV L +L EGK++ L+ LFS E E+ SSD+ + Y+N
Sbjct: 369 KDGKPWMPV--LRQLQAEGKLNDLQEKLLFSPTRPEEELYELSSDKWELKNLAGDPKYKN 426
Query: 315 K 317
K
Sbjct: 427 K 427
>UniRef50_A7PL28 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1042
Score = 33.5 bits (73), Expect = 3.3
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Frame = +2
Query: 152 GSCHQTRPSCSRRKNRQTREHL-LVFFTNQRIRDHYFFLGPSL--NDEVLKIMPVQKQTR 322
G+ ++ S S R T +H+ L ++ R+ FFL SL E L P + R
Sbjct: 711 GASARSPLSSSPRFIEATEQHVRLDVYSPDRLAGELFFLDGSLAFTAEELSRAPAEVLGR 770
Query: 323 AGQRTRFKAFVAIGDNNG----HIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 484
+ T +KA + G +GL VK KE A ++ + +V+P+R YWG
Sbjct: 771 SSHGTLYKATLDSGHMLTVKWLRVGL-VKHKKEFAKEVKRIGSIRHPNVVPLRAYYWG 827
>UniRef50_UPI00004996D6 Cluster: protein kinase; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
histolytica HM-1:IMSS
Length = 1726
Score = 33.1 bits (72), Expect = 4.4
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Frame = -2
Query: 514 KGGVWLSYLVTPVTSSDW*N*QLSKDN--SASNGSGDFLAALHTQTNMTVVVANGNKCLE 341
K V + + + SS W L +D+ S S LH T+ + + + C E
Sbjct: 475 KSYVLSTSFINMIDSSSW---YLQEDSFFSCERFSMTDTTHLHFNTSKKIQIQSSFDCKE 531
Query: 340 TC---ALSGTCLFLYRHDLKNLIIQGRSEEEIMISNSLI 233
C +LSG+C+ ++ ++ ++E E+ + N +I
Sbjct: 532 ECYSISLSGSCIINITRTIEETVVFEKTETEVYLGNDII 570
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 4.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 287 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 433
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q9RY83 Cluster: Putative uncharacterized protein; n=2;
Deinococcus|Rep: Putative uncharacterized protein -
Deinococcus radiodurans
Length = 309
Score = 32.7 bits (71), Expect = 5.8
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -3
Query: 549 DCYGTTLAGDLAREVCGFPILLPQ*PLRTGRTDSL 445
D +G L+ L R + G PILLP P RTG D+L
Sbjct: 80 DAWGEALSELLPRRISGLPILLPV-PERTGELDAL 113
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 32.3 bits (70), Expect = 7.7
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 284 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 445
++++I + K + G+ RFK + IG N IG+GV + AI A A
Sbjct: 134 KIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGVSKDFYLQEAINKARFFA 187
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,443,061
Number of Sequences: 1657284
Number of extensions: 10471462
Number of successful extensions: 30449
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 28380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30296
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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