Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0678
(551 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 172 3e-43
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 172 3e-43
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 172 3e-43
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 172 3e-43
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 172 3e-43
AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA... 30 2.4
AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA... 28 9.7
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 172 bits (418), Expect = 3e-43
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 437 ILAKLSVLPVRRGYWGNKIGKPHT 508
ILAKLSV+PVRRGYWGNKIGKPHT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 78.2 bits (184), Expect = 7e-15
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEII
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77
Score = 32.3 bits (70), Expect = 0.45
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 508 LPCKVTGKCGSVTV 549
+PCKVTGKCGSV+V
Sbjct: 163 VPCKVTGKCGSVSV 176
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 172 bits (418), Expect = 3e-43
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 437 ILAKLSVLPVRRGYWGNKIGKPHT 508
ILAKLSV+PVRRGYWGNKIGKPHT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 78.2 bits (184), Expect = 7e-15
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEII
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77
Score = 32.3 bits (70), Expect = 0.45
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 508 LPCKVTGKCGSVTV 549
+PCKVTGKCGSV+V
Sbjct: 163 VPCKVTGKCGSVSV 176
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 172 bits (418), Expect = 3e-43
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 437 ILAKLSVLPVRRGYWGNKIGKPHT 508
ILAKLSV+PVRRGYWGNKIGKPHT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 78.2 bits (184), Expect = 7e-15
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEII
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77
Score = 32.3 bits (70), Expect = 0.45
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 508 LPCKVTGKCGSVTV 549
+PCKVTGKCGSV+V
Sbjct: 163 VPCKVTGKCGSVSV 176
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 172 bits (418), Expect = 3e-43
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 437 ILAKLSVLPVRRGYWGNKIGKPHT 508
ILAKLSV+PVRRGYWGNKIGKPHT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 78.2 bits (184), Expect = 7e-15
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEII
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77
Score = 32.3 bits (70), Expect = 0.45
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 508 LPCKVTGKCGSVTV 549
+PCKVTGKCGSV+V
Sbjct: 163 VPCKVTGKCGSVSV 176
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 172 bits (418), Expect = 3e-43
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +2
Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 437 ILAKLSVLPVRRGYWGNKIGKPHT 508
ILAKLSV+PVRRGYWGNKIGKPHT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 78.2 bits (184), Expect = 7e-15
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +3
Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEII
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77
Score = 32.3 bits (70), Expect = 0.45
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 508 LPCKVTGKCGSVTV 549
+PCKVTGKCGSV+V
Sbjct: 163 VPCKVTGKCGSVSV 176
>AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA
protein.
Length = 579
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 123 HDHGRDHDRVHEDRHGLY 70
HDH DHD VH+ H Y
Sbjct: 413 HDHAPDHDHVHDHHHDHY 430
>AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA
protein.
Length = 1307
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 149 VGSCHQTRPSCSRRKNRQTREHLLVFFTNQRI 244
V SCH RP SRRK+R+ ++ F R+
Sbjct: 816 VSSCH-CRPGYSRRKHREPCRRVISFHLGMRV 846
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,011,087
Number of Sequences: 53049
Number of extensions: 512597
Number of successful extensions: 3445
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3243
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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