Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0677
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    29   0.027
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    27   0.19 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   1.8  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   5.3  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.3  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   7.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.3  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +2

Query: 554 WANSRSTPRSEASSRISVCPSLSTWVRTPSRCWTTRCTSGS 676
           WA   STP ++ S  +   P    WV   S   T R T+ S
Sbjct: 412 WARPPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVS 452


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 587 PPSAV*SASLPTGMPIPHAPKSPRPRNVLRRLQQWRG-RPS 468
           P +A  S + PTG+P P    SP   N+ +   Q +  RP+
Sbjct: 211 PAAAPRSVATPTGIPTPSTSASPPTVNIKKESPQMQSYRPT 251


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 532 RPSRPDPETFSVGYNNGADVRLRPVLKNIVY 440
           RP  P PE  SV   N +D+R +  ++ + Y
Sbjct: 48  RPLAPAPERTSVLVTNNSDLRCKRKIQFMPY 78


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 269 MGLLDRNEHLFYRFVADNVAEMMPI 343
           +GL+ R+  + YR +ADNVA    I
Sbjct: 150 VGLI-RDTAVLYRLLADNVANFNKI 173


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 287 NEHLFYRFVADNVAEMMPIVYTPTVGLACQKFG 385
           N H F RF+A N+  ++  +Y+  V      FG
Sbjct: 108 NCHTFGRFLAPNLTYLLVALYSGYVWTDILGFG 140


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 542 WASLWANSRSTP 577
           W S W N  +TP
Sbjct: 86  WVSFWLNRNATP 97


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +2

Query: 539 GWASLWANSRSTP 577
           GW ++W + + TP
Sbjct: 314 GWTTVWDDEQKTP 326


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 557 PTGMPIPHAPKSPRP 513
           PTG+  PH   SP P
Sbjct: 226 PTGLIPPHPGLSPHP 240


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 557 PTGMPIPHAPKSPRP 513
           PTG+  PH   SP P
Sbjct: 118 PTGLIPPHPGLSPHP 132


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 525 VAQTQKRSPSVTTMARTSVSGQFLRTSYTCPLSWIV 418
           + ++ +  PSV  ++R S S    +T YT P   +V
Sbjct: 352 IKESLRLYPSVPFISRVSGSEIQTKTGYTIPKDCMV 387


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 525 VAQTQKRSPSVTTMARTSVSGQFLRTSYTCPLSWIV 418
           + ++ +  PSV  ++R S S    +T YT P   +V
Sbjct: 352 IKESLRLYPSVPFISRVSGSEIQTKTGYTIPKDCMV 387


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,549
Number of Sequences: 336
Number of extensions: 4543
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)