Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0677
(680 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56046| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 7e-33
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 29 2.6
SB_29928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_57751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 4.6
SB_31575| Best HMM Match : Metallothionein (HMM E-Value=9.4) 28 6.1
SB_10560| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_39695| Best HMM Match : Pecanex_C (HMM E-Value=0) 28 8.0
SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49) 28 8.0
SB_13658| Best HMM Match : MbeD_MobD (HMM E-Value=2.3) 28 8.0
SB_10731| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_1852| Best HMM Match : WD40 (HMM E-Value=1.7) 28 8.0
>SB_56046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 674
Score = 137 bits (332), Expect = 7e-33
Identities = 57/85 (67%), Positives = 74/85 (87%)
Frame = +2
Query: 254 QYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDK 433
+YI LM LL+RNE LF+R + D E+MPIVYTPTVGLAC+K+G+++RRPRGLFI+IHDK
Sbjct: 118 KYIQLMALLERNESLFFRVLFDYTEELMPIVYTPTVGLACRKYGMIFRRPRGLFISIHDK 177
Query: 434 GHVYDVLKNWPETDVRAIVVTDGER 508
GH+ D++ NWP T+V+AIV+TDGER
Sbjct: 178 GHIRDIVSNWPTTEVKAIVMTDGER 202
Score = 98.3 bits (234), Expect = 5e-21
Identities = 42/56 (75%), Positives = 46/56 (82%)
Frame = +1
Query: 511 LGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITIDVGTNTQSMLDDPLYIGLR 678
LGLGDLG CGMGIPVGKLALYT GGI P CLP+ IDVGTN + +LDDP YIG+R
Sbjct: 204 LGLGDLGCCGMGIPVGKLALYTVCGGIDPEGCLPVMIDVGTNNEELLDDPFYIGVR 259
Score = 35.1 bits (77), Expect = 0.053
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 123 GYGFYHRRASVLGIHGLLPPRVKTQEEQVELCKLSIDRYENPL 251
G F +LGIHGLLPP V +QE Q + + R N L
Sbjct: 74 GLAFTLEERQILGIHGLLPPCVISQEIQAQRVYRELQRKPNDL 116
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 82 LSGLDHLKHPGLNKGMAFTIEERQSWGSTG 171
+ G D ++ LNKG+AFT+EERQ G G
Sbjct: 60 IRGTDIMRDSHLNKGLAFTLEERQILGIHG 89
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = -1
Query: 599 CGLMPPSAV*SASLPTGMPIPHAPKSPRPRNVLRRLQQWRGRPSPASS*EHRI 441
CGL S + S P P P P +PRPR R G P+P S EH +
Sbjct: 1346 CGLCTTSPIPSTPRPRP-PTPPRPPTPRPRPPTPR----PGPPTPRPSGEHNL 1393
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -3
Query: 570 EREFAHRDAHPACAQVAQTQKRSPSVTTMARTSVSGQFLRTSYTCPLSW 424
+R D CA + + KRSPS T T+ GQ + + + SW
Sbjct: 713 DRSSKRGDQEVHCADLTGSNKRSPSPTLPLDTTAIGQDVTSRFVIAPSW 761
>SB_29928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 342 LCTLRRLAWPVRSSALCTADQGASSSRSTIRDMYTM 449
+C R PVR+SA+ T ++ SSR+TI T+
Sbjct: 165 ICKDRVFMCPVRTSAVVTGEESTLSSRNTISSADTL 200
>SB_57751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 527 WAHAGWASLWANSRSTPRSEASSRISVCPSL--STWV 631
W G A+ W N + + ++S+R + CP L S WV
Sbjct: 462 WPQKGDAAFWYNLKRSGDGDSSTRHAACPVLVGSKWV 498
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 562 VCPQGCPSRMRPSRPDPETFSVGYNNGADVRLRPVLKN 449
VCP GCPS ++P T V Y+N +RL+ N
Sbjct: 597 VCPPGCPSEVKPV---CGTDGVTYDNLCSLRLKACTDN 631
>SB_31575| Best HMM Match : Metallothionein (HMM E-Value=9.4)
Length = 145
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 13 TYSEMERDRIGLWGSGDGQPTSGLSGLDHLKHPGLNKGMAFTIEERQSWGSTGCYHHESR 192
T E R R G+ G + G++G + P KGM R G TGCY +R
Sbjct: 66 TRGERCRTRQGVTGCHRTRARQGMTGCYRTRAP---KGMTGCHRTRARKGMTGCYRTRAR 122
Query: 193 R 195
+
Sbjct: 123 K 123
>SB_10560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -3
Query: 639 GVRTHVDSDGQTLMRLDASERGVEREFAHRDAHPACAQVAQTQKRSPSVTTMART 475
GVR DG ++MRL R + E A R+ C Q ++ +S S+ T T
Sbjct: 473 GVRPPKTMDGTSIMRLFRRSRPGKSEKARREKPYKCWQCSKAFSQSGSLQTHLHT 527
>SB_39695| Best HMM Match : Pecanex_C (HMM E-Value=0)
Length = 1048
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Frame = +2
Query: 344 VYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLK-------NWPETDVRAIVVTDG 502
V TPT+ + G + P G + + D G VYD + WP +R + G
Sbjct: 906 VTTPTLTI-----GSLPEEPHGRLVQLIDTGQVYDSINLCRPIDVQWPSEQMR---IKGG 957
Query: 503 ERFW 514
E+FW
Sbjct: 958 EKFW 961
>SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49)
Length = 679
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 516 TQKRSPSVTTMARTSVSGQFLRTSYTCPL 430
T R P + + R VSG FL +YTC L
Sbjct: 238 TPSRLPVFSFLVRHPVSGLFLHHNYTCAL 266
>SB_13658| Best HMM Match : MbeD_MobD (HMM E-Value=2.3)
Length = 529
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = +2
Query: 563 SRSTPRSEASSRISVCPSLSTWVRTPSR 646
SRSTPRS A SRI PS ST T SR
Sbjct: 435 SRSTPRSRAGSRIRT-PSTST-TTTSSR 460
>SB_10731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 545 ASLWANSRSTPRSEASSRISVCPSLSTWVRTPSRCW 652
AS W ++ R+ SR ++ P LS +R P R W
Sbjct: 46 ASNWTLKLTSKRALYQSRGAISPLLSATIRCPVRVW 81
>SB_1852| Best HMM Match : WD40 (HMM E-Value=1.7)
Length = 513
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/38 (31%), Positives = 27/38 (71%)
Frame = -2
Query: 268 KIDVLLSGFSYLSIESLHSSTCSSCVLTRGGNNPWIPK 155
++D+++SG + +I+S S+ +C++TR G++ W+ K
Sbjct: 9 RLDLIVSGSADTTIKSWGWSS-GACLMTRYGHSDWVIK 45
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,506,969
Number of Sequences: 59808
Number of extensions: 622204
Number of successful extensions: 2042
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2042
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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