Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0677
(680 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 24 1.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 24 1.5
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 23 2.0
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 3.6
U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor... 22 4.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.7
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 22 4.7
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 22 4.7
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 22 4.7
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 8.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 8.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 8.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 8.2
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 537 ACAQVAQTQKRSPSVTTMARTSVSGQFLRTSYTCPLS 427
AC + KR+ SVT+M + G T C +S
Sbjct: 115 ACGFIDNIDKRNLSVTSMIQKRALGPSFSTGERCRIS 151
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.8 bits (49), Expect = 1.5
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
Frame = -1
Query: 80 PLVGCPSPEPHNPIR-----SRSISLYVH 9
PL+ +PE H+PIR SRS+ L H
Sbjct: 71 PLLRFENPETHHPIRHGRRQSRSMDLNAH 99
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 352 SVHNWHHFSHVIRDETVEQMLIA 284
SVH+ HH V RD E +L+A
Sbjct: 21 SVHHCHHNGVVHRDLKPENLLLA 43
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 551 LWANSRSTPRSEASSRISVC 610
LW +SRST R A+S +C
Sbjct: 274 LWLDSRSTERMIAASVNLIC 293
>U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor
protein.
Length = 129
Score = 22.2 bits (45), Expect = 4.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 404 LVGGTQGRTSDRPGQPSECTQLASFQPRYPRRNG 303
+ G G + RPGQPS Q A F+ +NG
Sbjct: 70 MTGDAYGGLNIRPGQPSR--QHAGFEFGKEYKNG 101
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 196 KRSRLNYASSRSTDTKIHLTVHLSYG 273
K SR+ STD H V+ S+G
Sbjct: 673 KDSRIKTTEKLSTDPNTHFQVNQSHG 698
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 222 LSIDRYENPLNSTSILWGSW 281
LS+D Y+N L+ L G W
Sbjct: 159 LSMDGYQNILDKKDELLGEW 178
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 222 LSIDRYENPLNSTSILWGSW 281
LS+D Y+N L+ L G W
Sbjct: 159 LSMDGYQNILDKKDELLGEW 178
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 222 LSIDRYENPLNSTSILWGSW 281
LS+D Y+N L+ L G W
Sbjct: 159 LSMDGYQNILDKKDELLGEW 178
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 8.2
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2
Query: 542 WASLWANSRSTP 577
W S W N +TP
Sbjct: 239 WVSFWLNRNATP 250
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 8.2
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2
Query: 542 WASLWANSRSTP 577
W S W N +TP
Sbjct: 239 WVSFWLNRNATP 250
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 8.2
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2
Query: 542 WASLWANSRSTP 577
W S W N +TP
Sbjct: 178 WVSFWLNRNATP 189
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 8.2
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1
Query: 113 PGCLRWSRPERPLV 72
P +W P RP+V
Sbjct: 837 PNLTKWGNPNRPIV 850
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,508
Number of Sequences: 438
Number of extensions: 5571
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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