Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0676
(746 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 109 4e-25
SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces pom... 44 2e-05
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 33 0.043
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 31 0.17
SPBC3F6.03 |trr1|caf4|thioredoxin reductase Trr1|Schizosaccharom... 30 0.30
SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|... 28 1.2
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 28 1.2
SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl modifica... 28 1.6
SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolo... 27 2.8
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 3.8
SPBC26H8.01 |thi2|nmt2|thiazole biosynthetic enzyme|Schizosaccha... 26 5.0
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 26 5.0
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 26 6.6
SPBC336.02 |||18S rRNA dimethylase|Schizosaccharomyces pombe|chr... 26 6.6
SPBC776.03 |||homoserine dehydrogenase |Schizosaccharomyces pomb... 26 6.6
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 25 8.7
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 109 bits (262), Expect = 4e-25
Identities = 48/72 (66%), Positives = 61/72 (84%)
Frame = +3
Query: 531 ETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSV 710
+T+ KN +IA+GSEV PFPGVT DEK+I++STGALSL VPKKM V+G G+IGLE+GSV
Sbjct: 176 QTIKAKNFIIATGSEVKPFPGVTIDEKKIVSSTGALSLSEVPKKMTVLGGGIIGLEMGSV 235
Query: 711 YQRLGADVTAIE 746
+ RLGA+VT +E
Sbjct: 236 WSRLGAEVTVVE 247
Score = 107 bits (256), Expect = 2e-24
Identities = 47/81 (58%), Positives = 60/81 (74%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGI 435
GTCLNVGCIPSKALL+NSH+YH KHD K+RGI+ V+ + +MM+ K ++VK LT GI
Sbjct: 82 GTCLNVGCIPSKALLNNSHIYHTVKHDTKRRGIDVSGVSVNLSQMMKAKDDSVKSLTSGI 141
Query: 436 AMLFQKNKVNLVKGVGTIVAP 498
LF+KNKV KG G+ + P
Sbjct: 142 EYLFKKNKVEYAKGTGSFIDP 162
Score = 54.0 bits (124), Expect = 2e-08
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +2
Query: 113 RIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTL-EVLVSMLDVYHQ 289
R+ + + + + DL VIG GPGGYVAAI+ AQLG+K + VEK TL +++ + +
Sbjct: 34 RLYSAKASGNGEYDLCVIGGGPGGYVAAIRGAQLGLKTICVEKRGTLGGTCLNVGCIPSK 93
Query: 290 KLYCTTHIFTIWPNMTSSKGV 352
L +HI+ + T +G+
Sbjct: 94 ALLNNSHIYHTVKHDTKRRGI 114
>SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 464
Score = 44.0 bits (99), Expect = 2e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 525 GVETVNTKNILIASGSE-VTP--FPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGL 695
G + + K ILIA G + P PG + I S G LES PK++ ++GAG I +
Sbjct: 136 GTQVFSAKYILIAVGGHPIWPSHIPGAEYG----IDSDGFFELESQPKRVAIVGAGYIAV 191
Query: 696 ELGSVYQRLGAD 731
EL V+ LG +
Sbjct: 192 ELAGVFAALGTE 203
Score = 38.7 bits (86), Expect = 9e-04
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEV-TFDFKKMMEYKANAVKGLTGG 432
GTC+N GC+P K + + + L K KQ G ++ +FD+ M++ K +A G G
Sbjct: 44 GTCVNYGCVPKKIMWNIADLVAKMK-TAKQNGFPNSQLGSFDW-GMIKRKRDAYIGRLNG 101
Query: 433 I-AMLFQKNKVNLVKGVGTIVAPNKV 507
I K+ V + G + V+P +V
Sbjct: 102 IYERNVNKDGVAYISGHASFVSPTEV 127
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 33.1 bits (72), Expect = 0.043
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = -3
Query: 282 YTSNIETSTSKVGSFSTETTFMPSWAALIAATYPPGPEPITTRSASCV 139
++S++ +S+S S S T+ + S A+++++TY GP IT S S V
Sbjct: 146 HSSSVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYV 193
>SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 457
Score = 31.1 bits (67), Expect = 0.17
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 140 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 244
T DAD+++IG+G G + G KV+ +E+D
Sbjct: 3 TQDADIIIIGAGITGCALGAALGRQGRKVLVLERD 37
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 663 MLVIGAGVIGLELGSVYQRLGADVTAIE 746
+++IGAG+ G LG+ R G V +E
Sbjct: 8 IIIIGAGITGCALGAALGRQGRKVLVLE 35
>SPBC3F6.03 |trr1|caf4|thioredoxin reductase
Trr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 30.3 bits (65), Expect = 0.30
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 140 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 238
TH+ +V+IGSGP G+ AAI A+ +K V E
Sbjct: 2 THNK-VVIIGSGPAGHTAAIYLARGELKPVMYE 33
>SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 348
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 636 LSLESVPKKMLVIGAGVIGLELGSVYQRLG 725
++ E+ P+ ++++GAGVIGL + LG
Sbjct: 1 MTKENKPRDIVIVGAGVIGLTTAWILSDLG 30
>SPAC20G8.04c |||mitochondrial electron transfer
flavoprotein-ubiquinone
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 146 DADLVVIGSGPGGYVAAIKAAQLGMK 223
D D+ ++G+GP G AAI+ Q K
Sbjct: 90 DVDVCIVGAGPAGLSAAIRIKQQAAK 115
>SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl
modification enzyme|Schizosaccharomyces pombe|chr
2|||Manual
Length = 666
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 107 LVRIATRQYATTHDA--DLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
+ R R + T+ + ++VVIG G G AA A++LG K + K
Sbjct: 1 MFRTTKRYFCTSFNRRKNVVVIGGGHAGVEAAAAASRLGAKTTLLTK 47
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 657 KKMLVIGAGVIGLELGSVYQRLGADVTAI 743
K ++VIG G G+E + RLGA T +
Sbjct: 17 KNVVVIGGGHAGVEAAAAASRLGAKTTLL 45
>SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolog
Aif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 27.1 bits (57), Expect = 2.8
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Frame = +3
Query: 534 TVNTKNILIASGSEVTPFPGVTFDEKQII--------TSTGALSLESVPKK-MLVIGAGV 686
T + +++A+G E P D K + + A++ E+ KK +++IG+
Sbjct: 252 TESYTKLILATGGEPNKLPIPGLDSKNVYLLRSIADASKLAAVTTEAGDKKNIVIIGSSF 311
Query: 687 IGLELGSVYQRLGADVTAIE 746
IGLEL V + V +E
Sbjct: 312 IGLELAVVLKDHNVSVIGME 331
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 626 DWSTFLGVSTEKNVGDWSWSYRFG 697
+W T+ G +T N+ WS S R+G
Sbjct: 892 EWQTYDGNNTYCNLSGWSQSSRYG 915
>SPBC26H8.01 |thi2|nmt2|thiazole biosynthetic
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 328
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +2
Query: 95 RSGSLVRIATRQYATTHD----ADLVVIGSGPGGYVAA--IKAAQLGMKVVSVE 238
R ++ R TR+Y + D +D+V++G+G G AA I + +K+ +E
Sbjct: 55 RESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIE 108
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = -3
Query: 501 IWGNYSSYTFDKINLVLLKEHCNTSCEAFNSISFIFHHLFEVKCNFTSFNTPLLEVM 331
I+GNY + + IN LL + N ++ + + F ++CN + FN +L+++
Sbjct: 1938 IYGNYL-HLEEYINKKLLLINPNEEPDSLLFYALAYDLKFLIRCNQSQFNCDILQLL 1993
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 155 LVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
+ +IGSGP G AA + + G VV E+
Sbjct: 1758 VAIIGSGPAGLAAADQLNRAGHHVVIYER 1786
>SPBC336.02 |||18S rRNA dimethylase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 25.8 bits (54), Expect = 6.6
Identities = 20/82 (24%), Positives = 33/82 (40%)
Frame = +2
Query: 8 LRILYFNPKIQKKLLNMGYKFLKLASPTFRSGSLVRIATRQYATTHDADLVVIGSGPGGY 187
+R+ N ++ N +KF K LV A +D V+ GPG
Sbjct: 4 IRVRNNNAASDAEVRNTVFKFNKDFGQHILKNPLVAQGIVDKADLKQSD-TVLEVGPGTG 62
Query: 188 VAAIKAAQLGMKVVSVEKDPTL 253
++ + KV++VE DP +
Sbjct: 63 NLTVRMLEKARKVIAVEMDPRM 84
>SPBC776.03 |||homoserine dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 376
Score = 25.8 bits (54), Expect = 6.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 98 SGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVS 232
S +++ T++Y H LVVIG+G G V A +K++S
Sbjct: 325 SDNIISFTTKRY---HTRPLVVIGAGAGAAVTAAGVLGDMIKIMS 366
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 537 VNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQ 716
+ T++ +++ G F+ + ++LV+G G +GL + +V +
Sbjct: 131 ITTEDFCTKLPKQISVEEGALFEPMSVAVHAMTRGNLKCGSRVLVMGCGTVGLLMMAVAK 190
Query: 717 RLGA-DVTAIE 746
GA D+ A++
Sbjct: 191 AYGAIDIVAVD 201
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,154,971
Number of Sequences: 5004
Number of extensions: 67488
Number of successful extensions: 237
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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