Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0676
(746 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ549085-1|CAD70159.1| 529|Anopheles gambiae thioredoxin-disulf... 44 5e-06
AJ549084-1|CAD70158.1| 505|Anopheles gambiae thioredoxin-disulf... 44 5e-06
AJ459821-1|CAD30858.1| 502|Anopheles gambiae thioredoxin reduct... 44 5e-06
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 24 4.3
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 7.6
AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse t... 23 7.6
>AJ549085-1|CAD70159.1| 529|Anopheles gambiae thioredoxin-disulfide
reductase protein.
Length = 529
Score = 44.0 bits (99), Expect = 5e-06
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGE---VTFDFKKMMEYKANAVKGLT 426
GTC+NVGCIP K L+H + L A HD + G + + + D+ + E N +K +
Sbjct: 82 GTCVNVGCIPKK-LMHQASLLGEAIHDSQPYGWQLPDPAAIRHDWATLTESVQNHIKSVN 140
Query: 427 GGIAMLFQKNKVNLVKGVG 483
+ + KV V G+G
Sbjct: 141 WVTRVDLRDQKVEYVNGLG 159
Score = 40.7 bits (91), Expect = 5e-05
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +3
Query: 537 VNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQ 716
+ K+++IA G +P + + ITS SL P + L++GAG IGLE +
Sbjct: 179 LRAKHVVIAVGGRPR-YPDIPGAAEYGITSDDIFSLPQAPGRTLLVGAGYIGLECAGFLK 237
Query: 717 RLGADVTAI 743
LG DV+ +
Sbjct: 238 GLGYDVSVM 246
Score = 35.1 bits (77), Expect = 0.002
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 119 ATRQYAT-THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 238
AT +A ++ DLVVIG G GG A +A QLG KV ++
Sbjct: 27 ATVMFAKENYEYDLVVIGGGSGGLACAKQAVQLGAKVAVLD 67
>AJ549084-1|CAD70158.1| 505|Anopheles gambiae thioredoxin-disulfide
reductase protein.
Length = 505
Score = 44.0 bits (99), Expect = 5e-06
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGE---VTFDFKKMMEYKANAVKGLT 426
GTC+NVGCIP K L+H + L A HD + G + + + D+ + E N +K +
Sbjct: 58 GTCVNVGCIPKK-LMHQASLLGEAIHDSQPYGWQLPDPAAIRHDWATLTESVQNHIKSVN 116
Query: 427 GGIAMLFQKNKVNLVKGVG 483
+ + KV V G+G
Sbjct: 117 WVTRVDLRDQKVEYVNGLG 135
Score = 40.7 bits (91), Expect = 5e-05
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +3
Query: 537 VNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQ 716
+ K+++IA G +P + + ITS SL P + L++GAG IGLE +
Sbjct: 155 LRAKHVVIAVGGRPR-YPDIPGAAEYGITSDDIFSLPQAPGRTLLVGAGYIGLECAGFLK 213
Query: 717 RLGADVTAI 743
LG DV+ +
Sbjct: 214 GLGYDVSVM 222
Score = 35.9 bits (79), Expect = 0.001
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 119 ATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 238
AT ++ DLVVIG G GG A +A QLG KV ++
Sbjct: 4 ATAAEQENYEYDLVVIGGGSGGLACAKQAVQLGAKVAVLD 43
>AJ459821-1|CAD30858.1| 502|Anopheles gambiae thioredoxin reductase
protein.
Length = 502
Score = 44.0 bits (99), Expect = 5e-06
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGE---VTFDFKKMMEYKANAVKGLT 426
GTC+NVGCIP K L+H + L A HD + G + + + D+ + E N +K +
Sbjct: 55 GTCVNVGCIPKK-LMHQASLLGEAIHDSQPYGWQLPDPAAIRHDWATLTESVQNHIKSVN 113
Query: 427 GGIAMLFQKNKVNLVKGVG 483
+ + KV V G+G
Sbjct: 114 WVTRVDLRDQKVEYVNGLG 132
Score = 40.7 bits (91), Expect = 5e-05
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +3
Query: 537 VNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQ 716
+ K+++IA G +P + + ITS SL P + L++GAG IGLE +
Sbjct: 152 LRAKHVVIAVGGRPR-YPDIPGAAEYGITSDDIFSLPQAPGRTLLVGAGYIGLECAGFLK 210
Query: 717 RLGADVTAI 743
LG DV+ +
Sbjct: 211 GLGYDVSVM 219
Score = 34.7 bits (76), Expect = 0.003
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 143 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 238
++ DLVVIG G GG A +A QLG KV ++
Sbjct: 9 YEYDLVVIGGGSGGLACAKQAVQLGAKVAVLD 40
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 24.2 bits (50), Expect = 4.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 178 RARTDNNKICIMCGS 134
R+ TD ++CI CGS
Sbjct: 491 RSSTDRQQLCIRCGS 505
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.4 bits (48), Expect = 7.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 316 YHMAKHDFKQRGIETGEV 369
YH++++D Q I TG+V
Sbjct: 2925 YHVSRNDVTQHAITTGKV 2942
>AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse
transcriptase protein.
Length = 129
Score = 23.4 bits (48), Expect = 7.6
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = +2
Query: 254 EVLVSMLDVYHQKLYCTTHIFTIWPNMTSSKGVLKLV 364
E+++ +YH + Y +TH +P + + ++K V
Sbjct: 16 EIVIQNSLMYHCRSYISTHQHGFFPRRSVTTNLVKFV 52
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,378
Number of Sequences: 2352
Number of extensions: 17418
Number of successful extensions: 46
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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