Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0676
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical pr... 128 5e-30
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 48 5e-06
AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin r... 48 5e-06
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 48 5e-06
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical p... 36 0.030
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 34 0.12
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 32 0.50
AC024214-12|AAF36072.2| 370|Caenorhabditis elegans Hypothetical... 31 1.1
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 29 2.6
U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein... 29 2.6
AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine re... 29 2.6
Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical pr... 28 6.1
U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical pr... 28 6.1
D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein su... 28 6.1
AF043693-6|AAB97539.1| 640|Caenorhabditis elegans Hypothetical ... 28 6.1
Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z29560-12|CAL22705.1| 395|Caenorhabditis elegans Hypothetical p... 28 8.1
>Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical
protein LLC1.3 protein.
Length = 495
Score = 128 bits (308), Expect = 5e-30
Identities = 60/73 (82%), Positives = 69/73 (94%)
Frame = +3
Query: 528 VETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGS 707
VET+N +NILIASGSEVTPFPG+T DEKQI++STGALSL VPKKM+VIGAGVIGLELGS
Sbjct: 157 VETINARNILIASGSEVTPFPGITIDEKQIVSSTGALSLGQVPKKMVVIGAGVIGLELGS 216
Query: 708 VYQRLGADVTAIE 746
V+QRLGA+VTA+E
Sbjct: 217 VWQRLGAEVTAVE 229
Score = 110 bits (264), Expect = 1e-24
Identities = 53/85 (62%), Positives = 63/85 (74%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGI 435
GTCLNVGCIPSKALL+NSH HMA+HDF RGI+ + + KMME K+N+VK LTGGI
Sbjct: 66 GTCLNVGCIPSKALLNNSHYLHMAQHDFAARGIDC-TASLNLPKMMEAKSNSVKQLTGGI 124
Query: 436 AMLFQKNKVNLVKGVGTIVAPNKVE 510
LF+ NKV V+G TIV PN V+
Sbjct: 125 KQLFKANKVGHVEGFATIVGPNTVQ 149
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/54 (64%), Positives = 39/54 (72%)
Frame = +2
Query: 92 FRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTL 253
F ++ R Y+ T DADLVVIG GPGGYVAAIKAAQLGMK V VEK+ TL
Sbjct: 11 FAKRQFFQVLARNYSNTQDADLVVIGGGPGGYVAAIKAAQLGMKTVCVEKNATL 64
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGLTG 429
GTC+NVGCIP K L+H + L + HD K+ G + G+V + + + + + L
Sbjct: 217 GTCVNVGCIPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASLNW 275
Query: 430 GIAMLFQKNKVNLVKGVGTIVAPNKVEYTERR 525
G + ++ V + G P ++ T ++
Sbjct: 276 GYRVQLREKTVTYINSYGEFTGPFEISATNKK 307
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 125 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 238
+++ H DL+VIG G GG AA +A++LG KV ++
Sbjct: 165 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLD 202
Score = 35.1 bits (77), Expect = 0.053
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +3
Query: 519 EKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLE 698
+K VE + LI++G +P + ++ ITS L P K L +GA + LE
Sbjct: 307 KKKVEKLTADRFLISTGLR-PKYPEIPGVKEYTITSDDLFQLPYSPGKTLCVGASYVSLE 365
Query: 699 LGSVYQRLGADVTAI 743
G DVT +
Sbjct: 366 CAGFLHGFGFDVTVM 380
>AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin
reductase homolog protein.
Length = 525
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGLTG 429
GTC+NVGCIP K L+H + L + HD K+ G + G+V + + + + + L
Sbjct: 75 GTCVNVGCIPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASLNW 133
Query: 430 GIAMLFQKNKVNLVKGVGTIVAPNKVEYTERR 525
G + ++ V + G P ++ T ++
Sbjct: 134 GYRVQLREKTVTYINSYGEFTGPFEISATNKK 165
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 125 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 238
+++ H DL+VIG G GG AA +A++LG KV ++
Sbjct: 23 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLD 60
Score = 35.1 bits (77), Expect = 0.053
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +3
Query: 519 EKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLE 698
+K VE + LI++G +P + ++ ITS L P K L +GA + LE
Sbjct: 165 KKKVEKLTADRFLISTGLR-PKYPEIPGVKEYTITSDDLFQLPYSPGKTLCVGASYVSLE 223
Query: 699 LGSVYQRLGADVTAI 743
G DVT +
Sbjct: 224 CAGFLHGFGFDVTVM 238
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGLTG 429
GTC+NVGCIP K L+H + L + HD K+ G + G+V + + + + + L
Sbjct: 217 GTCVNVGCIPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASLNW 275
Query: 430 GIAMLFQKNKVNLVKGVGTIVAPNKVEYTERR 525
G + ++ V + G P ++ T ++
Sbjct: 276 GYRVQLREKTVTYINSYGEFTGPFEISATNKK 307
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 125 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 238
+++ H DL+VIG G GG AA +A++LG KV ++
Sbjct: 165 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLD 202
Score = 35.1 bits (77), Expect = 0.053
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +3
Query: 519 EKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLE 698
+K VE + LI++G +P + ++ ITS L P K L +GA + LE
Sbjct: 307 KKKVEKLTADRFLISTGLR-PKYPEIPGVKEYTITSDDLFQLPYSPGKTLCVGASYVSLE 365
Query: 699 LGSVYQRLGADVTAI 743
G DVT +
Sbjct: 366 CAGFLHGFGFDVTVM 380
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGI 435
GTC+NVGC+P K +++N L+ D G + FD+K + + + +K L G
Sbjct: 42 GTCVNVGCVPKK-VMYNCSLHAEFIRDHADYGFDVTLNKFDWKVIKKSRDEYIKRLNGLY 100
Query: 436 AMLFQKNKVNLVKGVGTIVAPNKVE 510
+ + V ++G T VE
Sbjct: 101 ESGLKGSSVEYIRGRATFAEDGTVE 125
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +3
Query: 546 KNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQRLG 725
KN LIA G + T P + E I S G LE +P + +V+GAG I +E+ V LG
Sbjct: 134 KNTLIAVGGKPT-IPNIKGAEHGI-DSDGFFDLEDLPSRTVVVGAGYIAVEIAGVLANLG 191
Query: 726 AD 731
+D
Sbjct: 192 SD 193
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGI 435
GTC+NVGC+P K +++N L+ D G + FD+K + + + +K L G
Sbjct: 56 GTCVNVGCVPKK-VMYNCSLHAEFIRDHADYGFDVTLNKFDWKVIKKSRDEYIKRLNGLY 114
Query: 436 AMLFQKNKVNLVKGVGTIVAPNKVE 510
+ + V ++G T VE
Sbjct: 115 ESGLKGSSVEYIRGRATFAEDGTVE 139
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +3
Query: 546 KNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQRLG 725
KN LIA G + T P + E I S G LE +P + +V+GAG I +E+ V LG
Sbjct: 148 KNTLIAVGGKPT-IPNIKGAEHGI-DSDGFFDLEDLPSRTVVVGAGYIAVEIAGVLANLG 205
Query: 726 AD 731
+D
Sbjct: 206 SD 207
>Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical
protein ZK637.10 protein.
Length = 503
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQ--RGIETGEVTFDFKKMMEYKANAVKGLTG 429
GTC NVGCIP K + + + KH K GI+ ++ D+ + + + VK
Sbjct: 65 GTCANVGCIPKKLMHQAAIVGKELKHADKYGWNGIDQEKIKHDWNVLSKNVNDRVKANNW 124
Query: 430 GIAMLFQKNKVNLVKGVGTIVAPNKVEYT 516
+ + K+N V +K+ T
Sbjct: 125 IYRVQLNQKKINYFNAYAEFVDKDKIVIT 153
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 125 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK-DPT 250
R+ +++ DL+VIG+G GG + +AA LG V ++ +PT
Sbjct: 13 RRLFSSNKFDLIVIGAGSGGLSCSKRAADLGANVALIDAVEPT 55
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 537 VNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQ 716
++ N++I++G +P + E I TS +L SVP K L++G G + LE
Sbjct: 164 LSAPNVVISTGLR-PKYPNIPGAELGI-TSDDLFTLASVPGKTLIVGGGYVALECAGFLS 221
Query: 717 RLGADVTAI 743
+V +
Sbjct: 222 AFNQNVEVL 230
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 264 TSTSKVGSFSTETTFMPSWAALIAATYPPGPEPITTRSA 148
TSTS ST T +P+ A+ T PP P P T+ S+
Sbjct: 615 TSTSTTAYTSTPTASIPAATAITTTTAPPKPSPTTSESS 653
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 125 RQYATT-HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 244
R Y T +AD+VV G G G A A+ G KV VEKD
Sbjct: 13 RSYTTAVANADVVVCGGGISGTSIAYHLAKRGKKVALVEKD 53
>AC024214-12|AAF36072.2| 370|Caenorhabditis elegans Hypothetical
protein Y77E11A.2 protein.
Length = 370
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 74 KLASPTFRSGSLVRIATRQYATTH--DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDP 247
++ S ++G ++ TR+ + +ADLV+ G G ++AA ++ + DP
Sbjct: 87 EIVSELGKAGISTKVVTREQLAQYLPEADLVISAGGDGTFLAAASVVNDNTPIIGINTDP 146
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 146 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLEVL 262
D +++VIG+GP G +++ ++ K+ + K T L
Sbjct: 170 DKEVIVIGAGPSGIDISLQLSETAKKITLISKKATYPTL 208
>U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein
721 protein.
Length = 597
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 152 DLVVIGSGPGGYVAAIKAAQLGMK 223
D+V++G GP G AAI+ QL K
Sbjct: 52 DVVIVGGGPSGLSAAIRLRQLAEK 75
>AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein21 protein.
Length = 330
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 419 PLTALALYSIIFLKSNV 369
P+ LALYS+IF+KSNV
Sbjct: 24 PIYCLALYSLIFIKSNV 40
>Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical
protein F52H3.2 protein.
Length = 638
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 113 RIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 244
R+ R + T D D++VIG G G +A AA+ G V V ++
Sbjct: 7 RLLRRCFQT--DVDVIVIGGGHAGCESAAAAARCGSNTVLVTQN 48
>U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical
protein C03G5.1 protein.
Length = 646
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 319 HMAKHDFKQRGIETGEVTFDFKKMME 396
H KH + IETGEV+ D++ +++
Sbjct: 603 HWRKHSIIRSNIETGEVSLDYRPVID 628
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 143 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
H D VV+G+G G AA+ A+ G+K + K
Sbjct: 41 HAYDAVVVGAGGAGLRAAMGLAEGGLKTAVITK 73
>D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein
subunit of complex II protein.
Length = 646
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 143 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
H D VV+G+G G AA+ A+ G+K + K
Sbjct: 41 HAYDAVVVGAGGAGLRAAMGLAEEGLKTAVITK 73
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 319 HMAKHDFKQRGIETGEVTFDFKKMME 396
H KH + IETGEV+ D++ +++
Sbjct: 603 HWRKHSIIRSNIETGEVSLDYRPVID 628
>AF043693-6|AAB97539.1| 640|Caenorhabditis elegans Hypothetical
protein C34B2.7 protein.
Length = 640
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 143 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
H D VV+G+G G AA+ ++ GMK + K
Sbjct: 34 HTFDAVVVGAGGAGLRAAMGLSEGGMKTAVITK 66
>Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical
protein C01H6.4 protein.
Length = 423
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 152 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLEVL 262
++V++G+GP G ++ AQ V + K T VL
Sbjct: 172 NVVIVGAGPSGIDITLQIAQTANHVTLISKKATYPVL 208
>Z29560-12|CAL22705.1| 395|Caenorhabditis elegans Hypothetical
protein K03H1.13 protein.
Length = 395
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +1
Query: 217 HEGGLSRKGPYFRGTCLNVGCIPS-KALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMM 393
H GGLS++ P+ G +P+ K++L + K+D ++ TG + ++
Sbjct: 78 HSGGLSQRMPHLSAYGKAFGTLPNCKSILETK--LEIYKNDLLEKLPSTGGIMITASDVI 135
Query: 394 EYKANAVKGLTGGIAMLFQKNKVNLVKGV--GTIVAPNKVEYTER 522
E NA K + + ++ +K +L G G V K +R
Sbjct: 136 ENMENAEK-VKSNVDIIVFAHKSSLEVGTQHGVFVMDKKTRKLKR 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,372,491
Number of Sequences: 27780
Number of extensions: 381127
Number of successful extensions: 1145
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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