Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0676
(746 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g48030.2 68414.m05351 dihydrolipoamide dehydrogenase 1, mitoc... 111 5e-25
At1g48030.1 68414.m05350 dihydrolipoamide dehydrogenase 1, mitoc... 111 5e-25
At3g17240.3 68416.m02203 dihydrolipoamide dehydrogenase 2, mitoc... 106 1e-23
At3g17240.1 68416.m02202 dihydrolipoamide dehydrogenase 2, mitoc... 106 1e-23
At3g16950.1 68416.m02166 dihydrolipoamide dehydrogenase 1, plast... 66 2e-11
At4g16155.1 68417.m02451 dihydrolipoamide dehydrogenase 2, plast... 65 4e-11
At3g17240.2 68416.m02204 dihydrolipoamide dehydrogenase 2, mitoc... 55 6e-08
At3g24170.1 68416.m03034 glutathione reductase, putative identic... 52 5e-07
At3g54660.1 68416.m06048 gluthatione reductase, chloroplast near... 44 8e-05
At3g23410.1 68416.m02951 alcohol oxidase-related similar to long... 38 0.005
At4g28570.1 68417.m04087 alcohol oxidase-related low similarity ... 37 0.016
At1g03990.1 68414.m00385 alcohol oxidase-related low similarity ... 36 0.029
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 36 0.038
At5g57030.1 68418.m07118 lycopene epsilon cyclase identical to l... 35 0.066
At4g35460.1 68417.m05040 thioredoxin reductase 1 / NADPH-depende... 34 0.087
At3g10230.1 68416.m01224 lycopene beta cyclase (LYC) identical t... 33 0.15
At5g24155.1 68418.m02841 squalene monooxygenase, putative / squa... 33 0.20
At4g19380.1 68417.m02853 alcohol oxidase-related similar to long... 32 0.35
At5g03630.1 68418.m00322 monodehydroascorbate reductase, putativ... 31 0.61
At4g37760.1 68417.m05345 squalene monooxygenase, putative / squa... 31 0.81
At4g30720.1 68417.m04354 expressed protein hypothetical protein ... 30 1.4
At5g24160.1 68418.m02842 squalene monooxygenase 1,2 / squalene e... 30 1.9
At1g06820.1 68414.m00727 carotenoid isomerase, putative similar ... 30 1.9
At5g52430.1 68418.m06506 hydroxyproline-rich glycoprotein family... 29 2.5
At2g40840.1 68415.m05042 glycoside hydrolase family 77 protein c... 29 2.5
At2g17420.1 68415.m02010 thioredoxin reductase 2 / NADPH-depende... 29 2.5
At1g57770.1 68414.m06554 amine oxidase family contains similarit... 29 2.5
At1g25380.1 68414.m03150 mitochondrial substrate carrier family ... 29 2.5
At5g07800.1 68418.m00894 flavin-containing monooxygenase family ... 29 3.3
At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7) ident... 29 3.3
At3g59750.1 68416.m06666 receptor lectin kinase, putative simila... 29 3.3
At3g52880.1 68416.m05827 monodehydroascorbate reductase, putativ... 29 4.3
At1g63370.1 68414.m07164 flavin-containing monooxygenase family ... 29 4.3
At1g62830.1 68414.m07093 amine oxidase family protein / SWIRM do... 29 4.3
At1g62620.1 68414.m07065 flavin-containing monooxygenase family ... 29 4.3
At5g60140.1 68418.m07539 transcriptional factor B3 family protei... 28 5.7
At5g24150.1 68418.m02839 squalene monooxygenase 1,1 / squalene e... 28 5.7
At4g34215.2 68417.m04859 expressed protein 28 5.7
At4g34215.1 68417.m04858 expressed protein 28 5.7
At2g33080.1 68415.m04056 leucine-rich repeat family protein cont... 28 5.7
At1g16140.1 68414.m01934 wall-associated kinase, putative contai... 28 5.7
At5g61290.1 68418.m07691 flavin-containing monooxygenase family ... 28 7.6
At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquino... 28 7.6
At5g37450.1 68418.m04507 leucine-rich repeat transmembrane prote... 27 10.0
At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger) fa... 27 10.0
At1g74470.1 68414.m08627 geranylgeranyl reductase identical to g... 27 10.0
>At1g48030.2 68414.m05351 dihydrolipoamide dehydrogenase 1,
mitochondrial / lipoamide dehydrogenase 1 (MTLPD1)
identical to GB:AAF34795 [gi:12704696] from [Arabidopsis
thaliana]
Length = 507
Score = 111 bits (267), Expect = 5e-25
Identities = 51/84 (60%), Positives = 59/84 (70%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGI 435
GTCLNVGCIPSKALLH+SH+YH AKH F GI+ V D M+ K NAVK LT GI
Sbjct: 80 GTCLNVGCIPSKALLHSSHMYHEAKHSFANHGIKVSSVEVDLPAMLAQKDNAVKNLTRGI 139
Query: 436 AMLFQKNKVNLVKGVGTIVAPNKV 507
LF+KNKV VKG G ++PN+V
Sbjct: 140 EGLFKKNKVTYVKGYGKFISPNEV 163
Score = 97.5 bits (232), Expect = 8e-21
Identities = 44/74 (59%), Positives = 60/74 (81%)
Frame = +3
Query: 525 GVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELG 704
G V K+I++A+GS+V PG+T DEK+I++STGALSL VPKK++VIGAG IGLE+G
Sbjct: 171 GNTIVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLSEVPKKLIVIGAGYIGLEMG 230
Query: 705 SVYQRLGADVTAIE 746
SV+ RLG++VT +E
Sbjct: 231 SVWGRLGSEVTVVE 244
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 152 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
D+V+IG GPGGYVAAIKA+QLG+K +EK
Sbjct: 45 DVVIIGGGPGGYVAAIKASQLGLKTTCIEK 74
>At1g48030.1 68414.m05350 dihydrolipoamide dehydrogenase 1,
mitochondrial / lipoamide dehydrogenase 1 (MTLPD1)
identical to GB:AAF34795 [gi:12704696] from [Arabidopsis
thaliana]
Length = 507
Score = 111 bits (267), Expect = 5e-25
Identities = 51/84 (60%), Positives = 59/84 (70%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGI 435
GTCLNVGCIPSKALLH+SH+YH AKH F GI+ V D M+ K NAVK LT GI
Sbjct: 80 GTCLNVGCIPSKALLHSSHMYHEAKHSFANHGIKVSSVEVDLPAMLAQKDNAVKNLTRGI 139
Query: 436 AMLFQKNKVNLVKGVGTIVAPNKV 507
LF+KNKV VKG G ++PN+V
Sbjct: 140 EGLFKKNKVTYVKGYGKFISPNEV 163
Score = 97.5 bits (232), Expect = 8e-21
Identities = 44/74 (59%), Positives = 60/74 (81%)
Frame = +3
Query: 525 GVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELG 704
G V K+I++A+GS+V PG+T DEK+I++STGALSL VPKK++VIGAG IGLE+G
Sbjct: 171 GNTIVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLSEVPKKLIVIGAGYIGLEMG 230
Query: 705 SVYQRLGADVTAIE 746
SV+ RLG++VT +E
Sbjct: 231 SVWGRLGSEVTVVE 244
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 152 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
D+V+IG GPGGYVAAIKA+QLG+K +EK
Sbjct: 45 DVVIIGGGPGGYVAAIKASQLGLKTTCIEK 74
>At3g17240.3 68416.m02203 dihydrolipoamide dehydrogenase 2,
mitochondrial / lipoamide dehydrogenase 2 (MTLPD2)
nearly identical to GB:AAF34796 [gi:6984216] from
[Arabidopsis thaliana]; alternative splice form exists
Length = 507
Score = 106 bits (255), Expect = 1e-23
Identities = 48/84 (57%), Positives = 59/84 (70%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGI 435
GTCLNVGCIPSKALLH+SH+YH AKH F G++ V D M+ K AVK LT G+
Sbjct: 80 GTCLNVGCIPSKALLHSSHMYHEAKHVFANHGVKVSSVEVDLPAMLAQKDTAVKNLTRGV 139
Query: 436 AMLFQKNKVNLVKGVGTIVAPNKV 507
LF+KNKVN VKG G ++P++V
Sbjct: 140 EGLFKKNKVNYVKGYGKFLSPSEV 163
Score = 96.7 bits (230), Expect = 1e-20
Identities = 45/79 (56%), Positives = 63/79 (79%)
Frame = +3
Query: 510 VHGEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVI 689
+ GE V V K+I++A+GS+V PG+T DEK+I++STGALSL +PKK++VIGAG I
Sbjct: 168 IDGENVV--VKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLTEIPKKLIVIGAGYI 225
Query: 690 GLELGSVYQRLGADVTAIE 746
GLE+GSV+ RLG++VT +E
Sbjct: 226 GLEMGSVWGRLGSEVTVVE 244
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/42 (61%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = +2
Query: 122 TRQYATT--HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
TR +A++ D D+V+IG GPGGYVAAIKAAQLG+K +EK
Sbjct: 33 TRGFASSGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIEK 74
>At3g17240.1 68416.m02202 dihydrolipoamide dehydrogenase 2,
mitochondrial / lipoamide dehydrogenase 2 (MTLPD2)
nearly identical to GB:AAF34796 [gi:6984216] from
[Arabidopsis thaliana]; alternative splice form exists
Length = 507
Score = 106 bits (255), Expect = 1e-23
Identities = 48/84 (57%), Positives = 59/84 (70%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGI 435
GTCLNVGCIPSKALLH+SH+YH AKH F G++ V D M+ K AVK LT G+
Sbjct: 80 GTCLNVGCIPSKALLHSSHMYHEAKHVFANHGVKVSSVEVDLPAMLAQKDTAVKNLTRGV 139
Query: 436 AMLFQKNKVNLVKGVGTIVAPNKV 507
LF+KNKVN VKG G ++P++V
Sbjct: 140 EGLFKKNKVNYVKGYGKFLSPSEV 163
Score = 96.7 bits (230), Expect = 1e-20
Identities = 45/79 (56%), Positives = 63/79 (79%)
Frame = +3
Query: 510 VHGEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVI 689
+ GE V V K+I++A+GS+V PG+T DEK+I++STGALSL +PKK++VIGAG I
Sbjct: 168 IDGENVV--VKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLTEIPKKLIVIGAGYI 225
Query: 690 GLELGSVYQRLGADVTAIE 746
GLE+GSV+ RLG++VT +E
Sbjct: 226 GLEMGSVWGRLGSEVTVVE 244
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/42 (61%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = +2
Query: 122 TRQYATT--HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
TR +A++ D D+V+IG GPGGYVAAIKAAQLG+K +EK
Sbjct: 33 TRGFASSGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIEK 74
>At3g16950.1 68416.m02166 dihydrolipoamide dehydrogenase 1,
plastidic / lipoamide dehydrogenase 1 (PTLPD1) identical
to plastidic lipoamide dehydrogenase from Arabidopsis
thaliana [gi:7159282]
Length = 570
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = +3
Query: 537 VNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQ 716
+ K+I+IA+GS G+ D K +ITS AL LESVP+ + ++G+G IGLE VY
Sbjct: 215 ITAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLESVPEWIAIVGSGYIGLEFSDVYT 274
Query: 717 RLGADVTAIE 746
LG++VT IE
Sbjct: 275 ALGSEVTFIE 284
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +1
Query: 238 KGPYFRGTCLNVGCIPSKALLHNSHLYH--MAKHDFKQRGIETGEVTFDFKKMMEYKANA 411
+G GTC+N GC+PSKALL S +H K G++ +D + + ++ N
Sbjct: 116 EGDVVGGTCVNRGCVPSKALLAVSGRMRELQNEHHMKSFGLQVSAAGYDRQGVADHANNL 175
Query: 412 VKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVEYTERRVL 531
+ + + V+++ G G+++ P KV+Y + ++
Sbjct: 176 ATKIRNNLTNSMKAIGVDILTGFGSVLGPQKVKYGKDNII 215
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 146 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 244
D DL++IG+G GG+ AA+ A + G+K +E D
Sbjct: 86 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 118
>At4g16155.1 68417.m02451 dihydrolipoamide dehydrogenase 2,
plastidic / lipoamide dehydrogenase 2 (PTLPD2) identical
to plastidic lipoamide dehydrogenase from Arabidopsis
thaliana [gi:7159284]
Length = 567
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/74 (45%), Positives = 46/74 (62%)
Frame = +3
Query: 525 GVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELG 704
G + K+I+IA+GS G+ D K +ITS AL LESVP + ++G+G IGLE
Sbjct: 208 GDNIITGKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLESVPDWIAIVGSGYIGLEFS 267
Query: 705 SVYQRLGADVTAIE 746
VY LG++VT IE
Sbjct: 268 DVYTALGSEVTFIE 281
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +1
Query: 238 KGPYFRGTCLNVGCIPSKALLHNSHLYH--MAKHDFKQRGIETGEVTFDFKKMMEYKANA 411
+G GTC+N GC+PSKALL S +H K G++ +D + + ++ +N
Sbjct: 114 EGDVVGGTCVNRGCVPSKALLAVSGRMRELQNEHHMKAFGLQVSAAGYDRQGVADHASNL 173
Query: 412 VKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVEY 513
+ + + V+++ G G ++ P KV+Y
Sbjct: 174 ATKIRNNLTNSMKALGVDILTGFGAVLGPQKVKY 207
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 146 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 244
D DL++IG+G GG+ AA+ A + G+K +E D
Sbjct: 84 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGD 116
>At3g17240.2 68416.m02204 dihydrolipoamide dehydrogenase 2,
mitochondrial / lipoamide dehydrogenase 2 (MTLPD2)
nearly identical to GB:AAF34796 [gi:6984216] from
[Arabidopsis thaliana]; alternative splice form exists
Length = 127
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/42 (61%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = +2
Query: 122 TRQYATT--HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
TR +A++ D D+V+IG GPGGYVAAIKAAQLG+K +EK
Sbjct: 33 TRGFASSGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIEK 74
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 256 GTCLNVGCIPSKALL 300
GTCLNVGCIPSK +L
Sbjct: 80 GTCLNVGCIPSKVIL 94
>At3g24170.1 68416.m03034 glutathione reductase, putative identical
to GB:P48641 from [Arabidopsis thaliana]
Length = 499
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGE-VTFDFKKMMEYKANAVKGLTGG 432
GTC+ GC+P K L++ + Y D K G E E V F +KK+++ K + + L
Sbjct: 71 GTCVIRGCVPKKILVYGA-TYGGELEDAKNYGWEINEKVDFTWKKLLQKKTDEILRLNNI 129
Query: 433 IAMLFQKNKVNLVKGVGTIVAPNKVE 510
L V L +G G +V PN+VE
Sbjct: 130 YKRLLANAAVKLYEGEGRVVGPNEVE 155
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/63 (44%), Positives = 39/63 (61%)
Frame = +3
Query: 546 KNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQRLG 725
K+ILIA+GS P + E I TS ALSLE PK+ +V+G G I +E S+++ +G
Sbjct: 169 KHILIATGSRAQK-PNIPGHELAI-TSDEALSLEEFPKRAIVLGGGYIAVEFASIWRGMG 226
Query: 726 ADV 734
A V
Sbjct: 227 ATV 229
>At3g54660.1 68416.m06048 gluthatione reductase, chloroplast nearly
identical to SP|P42770 Glutathione reductase,
chloroplast precursor (EC 1.8.1.7) (GR) (GRASE)
{Arabidopsis thaliana}; identical to cDNA glutathione
reductase GI:451197
Length = 565
Score = 44.4 bits (100), Expect = 8e-05
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = +1
Query: 256 GTCLNVGCIPSKALLHNSHLYHMAK--HDFKQRGIETGEVTFDFKKMMEYKANAVKGLTG 429
GTC+ GC+P K L++ S H + H F + ET E + D+ ++ K ++ LTG
Sbjct: 133 GTCVLRGCVPKKLLVYASKYSHEFEDSHGFGWK-YET-EPSHDWTTLIANKNAELQRLTG 190
Query: 430 GIAMLFQKNKVNLVKGVGTIVAPNKVE-----YTERRVL 531
+ K V L++G G ++ P+ V+ YT R +L
Sbjct: 191 IYKNILSKANVKLIEGRGKVIDPHTVDVDGKIYTTRNIL 229
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 543 TKNILIASGSE--VTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQ 716
T+NILIA G + PG F I S AL L S PKK+ ++G G I LE ++
Sbjct: 225 TRNILIAVGGRPFIPDIPGKEF----AIDSDAALDLPSKPKKIAIVGGGYIALEFAGIFN 280
Query: 717 RLGADV 734
L +V
Sbjct: 281 GLNCEV 286
>At3g23410.1 68416.m02951 alcohol oxidase-related similar to long
chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 746
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Frame = +2
Query: 137 TTHDA-----DLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
T HDA D+VV+GSG GG VAA A+ G+KVV +EK
Sbjct: 224 TEHDAIRIKCDVVVVGSGSGGGVAASVLAKSGLKVVVLEK 263
>At4g28570.1 68417.m04087 alcohol oxidase-related low similarity to
long chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 748
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 152 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
D VV+GSG GG VAA A+ G+KV+ +EK
Sbjct: 239 DAVVVGSGSGGGVAAANLAKAGLKVLVLEK 268
>At1g03990.1 68414.m00385 alcohol oxidase-related low similarity to
long chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]; Location
of EST 248L9T7, gb|AA713296
Length = 758
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2
Query: 146 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
+ D VV+GSG GG VAA A+ G++VV +EK
Sbjct: 245 ECDAVVVGSGCGGGVAAAILAKSGLRVVVIEK 276
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2
Query: 152 DLVVIGSGPGGYVAAIKAAQLGMKVVSVE 238
++V+IGSGP GY AAI AA+ +K V E
Sbjct: 85 NVVIIGSGPAGYTAAIYAARANLKPVVFE 113
>At5g57030.1 68418.m07118 lycopene epsilon cyclase identical to
lycopene epsilon cyclase [GI:1399181]
Length = 524
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 152 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 244
DLVVIG GP G A ++A+LG+KV + D
Sbjct: 110 DLVVIGCGPAGLALAAESAKLGLKVGLIGPD 140
>At4g35460.1 68417.m05040 thioredoxin reductase 1 / NADPH-dependent
thioredoxin reductase 1 (NTR1) identical to SP|Q39243
Length = 375
Score = 34.3 bits (75), Expect = 0.087
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 86 PTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 238
P+ S + A TH+ L ++GSGP + AAI AA+ +K + E
Sbjct: 30 PSLASAAFSSSAVMNGLETHNTRLCIVGSGPAAHTAAIYAARAELKPLLFE 80
>At3g10230.1 68416.m01224 lycopene beta cyclase (LYC) identical to
lycopene beta cyclase GI:1399183|GB:AAB53337
[Arabidopsis thaliana]
Length = 501
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 152 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTL 253
DL ++G GP G A + ++ G+ V S++ P L
Sbjct: 84 DLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 117
>At5g24155.1 68418.m02841 squalene monooxygenase, putative /
squalene epoxidase, putative similar to SP|O65404 (SE
1,1), SP|O65402 (SE 1,2)
Length = 121
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +2
Query: 149 ADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 244
AD++++G+G GG A A+ G +V+++E+D
Sbjct: 48 ADVIIVGAGVGGSALAYSLAKDGRRVLAIERD 79
>At4g19380.1 68417.m02853 alcohol oxidase-related similar to long
chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 726
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 152 DLVVIGSGPGGYVAAIKAAQLGMKVVSVE 238
D VV+GSG GG VAA A+ G KV+ +E
Sbjct: 225 DAVVVGSGSGGGVAAGVLAKAGYKVLVIE 253
>At5g03630.1 68418.m00322 monodehydroascorbate reductase, putative
monodehydroascorbate reductase (NADH), cucumber,
PIR:JU0182
Length = 435
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 633 ALSLESVPK-KMLVIGAGVIGLELGSVYQRLGADVTAI 743
A ++E+ K K +V+G G IGLELG+ + DVT +
Sbjct: 156 AYAMETKEKGKAVVVGGGYIGLELGAALKANNLDVTMV 193
>At4g37760.1 68417.m05345 squalene monooxygenase, putative /
squalene epoxidase, putative similar to SP|O65404 (SE
1,1), SP|O65402 (SE 1,2), SP|O65403 (SE 2)
Length = 525
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 71 LKLASPTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPT 250
L+ S T VR T + D D++++G+G G A + G +V +E+D T
Sbjct: 29 LRRRSKTIHGSVNVRNGTLTVKSGTDVDIIIVGAGVAGAALAHTLGKEGRRVHVIERDLT 88
>At4g30720.1 68417.m04354 expressed protein hypothetical protein -
Synechocystis sp. (strain PCC 6803),PIR2:S76076
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 155 LVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLE 256
+ V+G GP G AA+ A+ G V +E+ +E
Sbjct: 269 IAVVGGGPSGLFAALVLAEFGADVTLIERGQAVE 302
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 660 KMLVIGAGVIGLELGSVYQRLGADVTAIE 746
K+ V+G G GL V GADVT IE
Sbjct: 268 KIAVVGGGPSGLFAALVLAEFGADVTLIE 296
>At5g24160.1 68418.m02842 squalene monooxygenase 1,2 / squalene
epoxidase 1,2 (SQP1,2) identical to SP|O65402
Length = 517
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 149 ADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 244
AD++++G+G GG A A+ G +V +E+D
Sbjct: 46 ADVIIVGAGVGGSALAYALAKDGRRVHVIERD 77
>At1g06820.1 68414.m00727 carotenoid isomerase, putative similar to
carotenoid isomerase from Lycopersicon esculentum
[gi:19550437]; contains Pfam profile: PF02032 Phytoene
dehydrogenase related enzyme
Length = 595
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 152 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
D +VIGSG GG VAA + A +V+ +EK
Sbjct: 79 DAIVIGSGIGGLVAATQLAVKEARVLVLEK 108
>At5g52430.1 68418.m06506 hydroxyproline-rich glycoprotein family
protein Common family member At4g25620 [Arabidopsis
thaliana]
Length = 438
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 709 TEPSSKPITPAPITNIFFGTDSKESAPVDVIICFSSKVT 593
TEPS+ P TP P +++ T S P ++ S ++T
Sbjct: 151 TEPSTAPYTPPPESSVHITTPSSPEVPFAQLLTSSLELT 189
>At2g40840.1 68415.m05042 glycoside hydrolase family 77 protein
contains Pfam profiles PF02446:
4-alpha-glucanotransferase, PF00686: Starch binding
domain; contains a non-consensus AT-AC intron between at
intron 5
Length = 955
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -3
Query: 498 WGNYSSYTFDKINLVLLKE--HCNTSC 424
WG +S YT DK+ ++ K+ H NT C
Sbjct: 433 WGTFSDYTDDKLEKLISKDNLHYNTIC 459
>At2g17420.1 68415.m02010 thioredoxin reductase 2 / NADPH-dependent
thioredoxin reductase 2 (NTR2) identical to SP|Q39242
Length = 330
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 140 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 238
TH + ++GSGP + AAI A++ +K + E
Sbjct: 3 THKTKVCIVGSGPAAHTAAIYASRAELKPLLFE 35
>At1g57770.1 68414.m06554 amine oxidase family contains similarity
to carotenoid isomerase [Lycopersicon esculentum]
GI:19550437, phytoene dehydrogenase (PDH1) GI:433144
from (Cercospora nicotianae); contains Pfam profile
PF01593 amine oxidase, flavin-containing
Length = 574
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Frame = +2
Query: 86 PTFRSGSLVRIATRQYATTH-----------DADLVVIGSGPGGYVAAIKAAQLGMKVVS 232
PT RS S +R ++ A+++ +AD+VVIGSG GG A+ V+
Sbjct: 21 PTIRSSSFIRSSSSSSASSNGNLKEPFSGEPEADVVVIGSGIGGLCCGALLARYDQDVIV 80
Query: 233 VE 238
+E
Sbjct: 81 LE 82
>At1g25380.1 68414.m03150 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 363
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 352 IETGEVTFDFKKMMEYKANAVKGLT-GGIAMLF 447
IE G TFD++ + E ANA G T G IA F
Sbjct: 2 IEHGNSTFDYRSIREVAANAGAGATAGAIAATF 34
>At5g07800.1 68418.m00894 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase 2 (FMO2) from Homo
sapiens [GI:1834493]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like
Length = 460
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 122 TRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 244
T + + + + VIG+GP G V+A + + G KVV +E++
Sbjct: 5 TSEASRSRSKKVCVIGAGPAGLVSARELRKEGHKVVVLEQN 45
>At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7) identical
to COP1-Interacting Protein 7 (CIP7) GI:3327868 from
[Arabidopsis thaliana]
Length = 1058
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Frame = +2
Query: 80 ASPTFRSGSLVRIATRQYATTHDADLVVIG--SGPGGYVA-------AIKAAQLGMKVVS 232
A P RS ++ R+A + A VI S P GY + K Q K V
Sbjct: 822 AKPVLRSSTIERLAVARTAPKEPQQKPVIKRTSKPSGYKTEKAQEKKSSKIGQSDAKSVE 881
Query: 233 VEKDPTLEVLVSMLDVYHQKL 295
+ +DP+LE+ ++++ H L
Sbjct: 882 LSRDPSLEIKETVVEDSHSYL 902
>At3g59750.1 68416.m06666 receptor lectin kinase, putative similar
to receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733
Length = 626
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -3
Query: 279 TSNIETSTSKVGSFSTETTFMPSWAALIAATYPPGPEPITTRSASCVVAYCL 124
T +I + S++T P+W ++ T PP P+ + R+ ++A CL
Sbjct: 201 TGSIGAFHYMLSSYATPKVENPTWEFIVVPTLPPYPKKSSDRTKK-ILAVCL 251
>At3g52880.1 68416.m05827 monodehydroascorbate reductase, putative
monodehydroascorbate reductase (NADH), Lycoperison
esculentum, PIR:T06407
Length = 434
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 660 KMLVIGAGVIGLELGSVYQRLGADVTAI 743
K +V+G G IGLEL +V + DVT +
Sbjct: 165 KAVVVGGGYIGLELSAVLRINNLDVTMV 192
>At1g63370.1 68414.m07164 flavin-containing monooxygenase family
protein / FMO family protein similar to FMO5 from Cavia
porcellus [SP|P49109]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like
Length = 450
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 140 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
T + VIG+GP G VAA + + G VV EK
Sbjct: 8 TRSHHVAVIGAGPAGLVAARELRREGHSVVVFEK 41
>At1g62830.1 68414.m07093 amine oxidase family protein / SWIRM
domain-containing protein contains Pfam profile: PF01593
Flavin containing amine oxidase
Length = 844
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 41 KKLLNMGYKFL-KLASPTFRSGSLVRIAT-RQYATTHDADLVVIGSGPGGYVAAIKAAQL 214
K L++ Y FL + F +++ A R + ++VV+G+G G VAA + +
Sbjct: 228 KTLVDTAYNFLLEHGYINFGLAPVIKEAKLRSFDGVEPPNVVVVGAGLAGLVAARQLLSM 287
Query: 215 GMKVVSVE 238
G +V+ +E
Sbjct: 288 GFRVLVLE 295
>At1g62620.1 68414.m07065 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase 3 (FMO3) from Rattus
norvegicus [GI:12006730], FMO1 from Canis familiaris]
[GI:15420722], FMO1 from Homo sapiens [SP|Q01740];
contains Pfam profile: PF00743 Flavin-binding
monooxygenase-like
Length = 450
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 140 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
T + VIG+GP G VAA + + G VV EK
Sbjct: 8 TRSHHVAVIGAGPAGLVAARELRREGHSVVVFEK 41
>At5g60140.1 68418.m07539 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 328
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 436 AMLFQKNKVNLVKGVGTIVAPNKVEYTERRVLRL 537
A+ QKN VKG G+ + NK++ T++ + L
Sbjct: 277 AIKIQKNGCIFVKGFGSFIRRNKMKMTDKMICEL 310
>At5g24150.1 68418.m02839 squalene monooxygenase 1,1 / squalene
epoxidase 1,1 (SQP1,1) identical to SP|O65404
Length = 516
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 152 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 244
D++++G+G GG A A+ G +V +E+D
Sbjct: 47 DVIIVGAGVGGSALAYALAKDGRRVHVIERD 77
>At4g34215.2 68417.m04859 expressed protein
Length = 260
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 158 VVIGSGPGGYVAAIKAAQLGMKVVSV 235
V I SG GGY+ ++ AQLG+K+ +V
Sbjct: 198 VAIASG-GGYIDKVREAQLGLKLSNV 222
>At4g34215.1 68417.m04858 expressed protein
Length = 260
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 158 VVIGSGPGGYVAAIKAAQLGMKVVSV 235
V I SG GGY+ ++ AQLG+K+ +V
Sbjct: 198 VAIASG-GGYIDKVREAQLGLKLSNV 222
>At2g33080.1 68415.m04056 leucine-rich repeat family protein
contains leucine rich-repeat domain Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 740
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = -3
Query: 507 NFIWGNYSSYTFDKINLVLLKEHCNTSCEAFNSISFIFHHLFEVKCNFTSFNTPLLEVMF 328
N +W + S+ K+ L C + NS F FH L + + +F + F
Sbjct: 66 NGVWCDNSTGVVTKLQL----NACLSGTLNPNSSLFWFHQLRFLNLSHNNFTSTSFPSEF 121
Query: 327 GHMVKM*VVQ*SF*WYTSNIETSTSKVGSFS 235
G++ K+ V+ SF +T + +S S + +
Sbjct: 122 GNLNKVEVLDLSFNSFTGQVPSSFSNLSQLT 152
>At1g16140.1 68414.m01934 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 690
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 157 CCYRFGPWWIRSSY*SCPAWHEGGLSRKGPYFRGTCLNVG-C-IPSK 291
C R+G ++ R SY SC + G R PY RG C+++ C +P+K
Sbjct: 257 CLCRYG-YFSRMSYRSC---YCGSGYRGNPYIRGGCIDIDECEVPNK 299
>At5g61290.1 68418.m07691 flavin-containing monooxygenase family
protein / FMO family protein low similarity to FMO3 from
Homo sapiens [SP|P31513]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like; supported by
full-length cDNA Ceres:14492
Length = 461
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 161 VIGSGPGGYVAAIKAAQLGMKVVSVEKD 244
VIG+GP G V+A + + G KVV +E++
Sbjct: 18 VIGAGPSGLVSARELKKEGHKVVVMEQN 45
>At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquinone
oxidoreductase family protein contains Pfam profile:
PF05187 Electron transfer flavoprotein-ubiquinone
oxidoreductase
Length = 633
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 152 DLVVIGSGPGGYVAAIKAAQLGMK 223
D++++G+GP G AAI+ QL +
Sbjct: 101 DVLIVGAGPAGLSAAIRLKQLSQE 124
>At5g37450.1 68418.m04507 leucine-rich repeat transmembrane protein
kinase, putative
Length = 935
Score = 27.5 bits (58), Expect = 10.0
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 59 GYKFLKLASPTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLG 217
GY F +L S T L +I Y + L PGG V A+K A+ G
Sbjct: 594 GYNFTELDSATSSFSDLSQIGRGGYGKVYKGHL------PGGLVVAVKRAEQG 640
>At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger)
family protein similar to C-terminal zinc-finger
[Glycine max] GI:558543; contains Pfam profile: PF00097
zinc finger, C3HC4 type (RING finger)
Length = 486
Score = 27.5 bits (58), Expect = 10.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 507 NFIWGNYSSYTFDKINLVLLKEHCN 433
NF GNY+++ F + + +HCN
Sbjct: 194 NFSQGNYAAHPFPPLGSIWYDQHCN 218
>At1g74470.1 68414.m08627 geranylgeranyl reductase identical to
geranylgeranyl reductase GB:Y14044 [Arabidopsis
thaliana] (involvement: chlorophyll, the tocopherol and
the phylloquinone pathways Eur J Biochem 1998 Jan
15;251(1-2):413-7)
Length = 467
Score = 27.5 bits (58), Expect = 10.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 155 LVVIGSGPGGYVAAIKAAQLGMKVVSVEK 241
+ VIG GP G AA AQ G++ + +E+
Sbjct: 58 VAVIGGGPAGGAAAETLAQGGIETILIER 86
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,336,932
Number of Sequences: 28952
Number of extensions: 354794
Number of successful extensions: 1211
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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