BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0672 (671 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q25823 Cluster: Clp (C?) protein; n=24; Plasmodium|Rep:... 35 1.6 UniRef50_A0D3H7 Cluster: Chromosome undetermined scaffold_36, wh... 35 2.1 UniRef50_Q33575 Cluster: NADH-ubiquinone oxidoreductase chain 4;... 34 3.6 UniRef50_Q7RN75 Cluster: Putative uncharacterized protein PY0194... 33 4.8 UniRef50_Q14KE0 Cluster: Plectrovirus svts2 orf 2 transmembrane ... 33 6.3 UniRef50_A6CJK5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.3 >UniRef50_Q25823 Cluster: Clp (C?) protein; n=24; Plasmodium|Rep: Clp (C?) protein - Plasmodium falciparum Length = 766 Score = 35.1 bits (77), Expect = 1.6 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%) Frame = -3 Query: 621 LSYNRSI*RFEVKLLLFNTYEYNI*L*VYITLRICHRV-KVLICLRKFKSKLCYIECTIL 445 L N+ I ++ L L N Y+YN I + ++V +LI L F K+ +L Sbjct: 52 LKINKKIINNKIILSLLNKYKYNNKN--IININFSNKVINILIKLNNFNFKINSFNLLLL 109 Query: 444 C---E*SNSDIVTFFKFIMLNFHMTALSTLNIH*YLVYSTNINQ*VLM*CYMKFLQITLN 274 + +N DI FK++ LNF S LN++ Y+ TNI + ++I L Sbjct: 110 LLEEKNNNKDINYLFKYLNLNF-----SNLNLNNYI--KTNI--------FSNNIRIKLK 154 Query: 273 AKNVKIPNIQYTYMN 229 +V + N+ Y Y N Sbjct: 155 EISVNLLNLNYIYNN 169 >UniRef50_A0D3H7 Cluster: Chromosome undetermined scaffold_36, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_36, whole genome shotgun sequence - Paramecium tetraurelia Length = 648 Score = 34.7 bits (76), Expect = 2.1 Identities = 19/60 (31%), Positives = 32/60 (53%) Frame = +1 Query: 235 ICILDIGYFNVLCIKCNLQKLHVTSH*NLLINVRTIY*ILMYI*RAKRCHMEIQHNKFKE 414 +C D+GYF C + L+ +HV S+ I I I++ I AK+ H+ ++ NK + Sbjct: 23 VCECDLGYFGTECSQ-KLEDIHVVSY-YAFIGFFLILFIVLLILTAKQLHLSVKTNKIPQ 80 >UniRef50_Q33575 Cluster: NADH-ubiquinone oxidoreductase chain 4; n=3; Trypanosomatidae|Rep: NADH-ubiquinone oxidoreductase chain 4 - Trypanosoma brucei Length = 437 Score = 33.9 bits (74), Expect = 3.6 Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 4/56 (7%) Frame = -1 Query: 596 VLKLNY----FYLIHTSIIYSFKFI*HYEFAIELKFSYVYVNLRVNYATSNVRFFV 441 +LKLN F L+ +IIY + +Y F I ++ +YVYVN+ +NY + FF+ Sbjct: 1 MLKLNLICINFILLIVTIIYIYI---NYSFCIGIEINYVYVNIYLNYISLWFVFFM 53 >UniRef50_Q7RN75 Cluster: Putative uncharacterized protein PY01947; n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein PY01947 - Plasmodium yoelii yoelii Length = 2095 Score = 33.5 bits (73), Expect = 4.8 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 2/93 (2%) Frame = +2 Query: 185 NQFDLKRRLRRYKIKFIYVYWILGILTFFALSVICKNFM*HHIKTY*LMFVLYT--KY*C 358 N+F ++ +I F ++ ++LGI T F + + F+ H I + + F+ T Y Sbjct: 10 NRFSFSKKKNWARINFTFLVFVLGIKTLFCILL----FLYHQIVLFFIFFISTTISLYAL 65 Query: 359 IFNVLSAVIWKFNIINLKKVTMSLLLYSQRIVH 457 + N +++I I+ L + S+ L S IVH Sbjct: 66 VINTFTSLI--LYIVVLFSILSSIGLSSLGIVH 96 >UniRef50_Q14KE0 Cluster: Plectrovirus svts2 orf 2 transmembrane protein; n=8; root|Rep: Plectrovirus svts2 orf 2 transmembrane protein - Spiroplasma citri Length = 336 Score = 33.1 bits (72), Expect = 6.3 Identities = 16/72 (22%), Positives = 36/72 (50%) Frame = +2 Query: 179 FQNQFDLKRRLRRYKIKFIYVYWILGILTFFALSVICKNFM*HHIKTY*LMFVLYTKY*C 358 F+N F L +R + K + YV W + + F+ ++C N + + ++ +++ + Sbjct: 2 FKNYFKLFKRQKNIKFSYWYVNWFMANILFY-FFIVCFNLQFIYFSSTSVIDIIFFIFLV 60 Query: 359 IFNVLSAVIWKF 394 IF+++ W F Sbjct: 61 IFDII--FFWSF 70 >UniRef50_A6CJK5 Cluster: Putative uncharacterized protein; n=1; Bacillus sp. SG-1|Rep: Putative uncharacterized protein - Bacillus sp. SG-1 Length = 710 Score = 33.1 bits (72), Expect = 6.3 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = -1 Query: 605 VYDVLKLNYFYLIHTSIIYSFKFI*HYEFAIELKFSYVYVNLR 477 +Y L ++YF LI ++I+ K HYEF + L F ++++ + Sbjct: 464 LYIFLNISYFILITAAVIFFKKKNSHYEFTLALIFWFLFIGYK 506 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 518,546,585 Number of Sequences: 1657284 Number of extensions: 8939767 Number of successful extensions: 15985 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 15443 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15975 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 51652897375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -