Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0672
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   1.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.2  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -1

Query: 155 MHIILTRN*QLYRLSTIDQLSHCLILMF 72
           ++IILT N   Y  + I  + +C+I++F
Sbjct: 236 LYIILTNNQAKYCTTLIGLIKNCVIVIF 263


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -1

Query: 584 NYFYLIHTSIIYSFKFI*HYEFAIELKFSYVYVNLRVNYATSNVRFFV 441
           +Y Y   T I + F     +   I +   +V+   RVNY  SN+   V
Sbjct: 66  SYMYAF-THIFFFFAICCDFIALIVVNIVHVFRKRRVNYKDSNIGLVV 112


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 588 LQNVIYFYCMTSLFH 632
           L+ + YFYC++  F+
Sbjct: 53  LRRIYYFYCVSITFN 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,300
Number of Sequences: 336
Number of extensions: 2947
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)