Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0669
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97192-2|AAO38678.1|  622|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U97192-1|AAB52434.2|  986|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U58743-4|AAB00617.1|  177|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z81112-3|CAB03273.1|  656|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p...    29   4.3  
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.      29   4.3  
Z36753-9|CAA85337.1|  445|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>U97192-2|AAO38678.1|  622|Caenorhabditis elegans Hypothetical
           protein C01F4.2b protein.
          Length = 622

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 57  SAPESLVWCWHSE-VRWAASFLYRYSNQSCCSETENSAWKSVNG-TLRSAE 203
           S+  S  W + S+ + W     Y YS+ S  S + +SAWKS++  T RS +
Sbjct: 258 SSSHSEGWKYSSQKLLWKLKPKYAYSHASSTSSSTDSAWKSLDSMTWRSVD 308


>U97192-1|AAB52434.2|  986|Caenorhabditis elegans Hypothetical
           protein C01F4.2a protein.
          Length = 986

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 57  SAPESLVWCWHSE-VRWAASFLYRYSNQSCCSETENSAWKSVNG-TLRSAE 203
           S+  S  W + S+ + W     Y YS+ S  S + +SAWKS++  T RS +
Sbjct: 258 SSSHSEGWKYSSQKLLWKLKPKYAYSHASSTSSSTDSAWKSLDSMTWRSVD 308


>U58743-4|AAB00617.1|  177|Caenorhabditis elegans Hypothetical
           protein F39F10.5 protein.
          Length = 177

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 551 LAVHIKVAYCCGQYFFFHTL 610
           +A+++ V YC GQYF +H L
Sbjct: 8   IALYVSVEYCRGQYFDYHDL 27


>Z81112-3|CAB03273.1|  656|Caenorhabditis elegans Hypothetical
           protein T02B5.3 protein.
          Length = 656

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 675 RKTWQGVYDTKKFGELCSRASARV*K 598
           +KTW GV +TKKF   C   S +  K
Sbjct: 69  QKTWSGVLETKKFKPACMSNSTKTYK 94


>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
            protein C02F4.1 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 542  NALYFKRAYIRYFYDLKDLQESWGNNFNIDK 450
            N    K  Y++Y Y L DL  S+GN     K
Sbjct: 1219 NQYSHKELYVKYIYKLYDLHTSYGNKIEAAK 1249


>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
            C02F4.1 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 542  NALYFKRAYIRYFYDLKDLQESWGNNFNIDK 450
            N    K  Y++Y Y L DL  S+GN     K
Sbjct: 1219 NQYSHKELYVKYIYKLYDLHTSYGNKIEAAK 1249


>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 542  NALYFKRAYIRYFYDLKDLQESWGNNFNIDK 450
            N    K  Y++Y Y L DL  S+GN     K
Sbjct: 1219 NQYSHKELYVKYIYKLYDLHTSYGNKIEAAK 1249


>Z36753-9|CAA85337.1|  445|Caenorhabditis elegans Hypothetical
           protein T09A5.11 protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 152 NGEFSMEICKWNFKECGVINVKISN 226
           N +F+  I +W  KE GV+ VK  N
Sbjct: 265 NADFATAITRWVMKESGVLRVKTVN 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,738,214
Number of Sequences: 27780
Number of extensions: 362744
Number of successful extensions: 980
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)