Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0665
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    32   0.004
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    32   0.004
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    32   0.004
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.77 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   1.3  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   3.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   3.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   3.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   3.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   7.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   7.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   7.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   7.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   7.2  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   7.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   7.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.5  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
 Frame = -2

Query: 262 QRWLHERADLWSKSGQLWGRLRRPSQSSLVGSAAASNRHLSTSLRNALYKKHHLEKPR-- 89
           QRWL     L  +    WG+ ++  +  L      + +  + +L+   YK + LEK R  
Sbjct: 27  QRWLERTPGLELEGFNFWGKYQKAVEKLLTEQKELAEKEEAETLKR--YKLNDLEKRREV 84

Query: 88  --AIFVVNLSERQMEKHER 38
             +IF V + E  M + ER
Sbjct: 85  YESIFKVEVHEALMSRGER 103


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
 Frame = -2

Query: 262 QRWLHERADLWSKSGQLWGRLRRPSQSSLVGSAAASNRHLSTSLRNALYKKHHLEKPR-- 89
           QRWL     L  +    WG+ ++  +  L      + +  + +L+   YK + LEK R  
Sbjct: 187 QRWLERTPGLELEGFNFWGKYQKAVEKLLTEQKELAEKEEAETLKR--YKLNDLEKRREV 244

Query: 88  --AIFVVNLSERQMEKHER 38
             +IF V + E  M + ER
Sbjct: 245 YESIFKVEVHEALMSRGER 263


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
 Frame = -2

Query: 262 QRWLHERADLWSKSGQLWGRLRRPSQSSLVGSAAASNRHLSTSLRNALYKKHHLEKPR-- 89
           QRWL     L  +    WG+ ++  +  L      + +  + +L+   YK + LEK R  
Sbjct: 187 QRWLERTPGLELEGFNFWGKYQKAVEKLLTEQKELAEKEEAETLKR--YKLNDLEKRREV 244

Query: 88  --AIFVVNLSERQMEKHER 38
             +IF V + E  M + ER
Sbjct: 245 YESIFKVEVHEALMSRGER 263


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 426 PHVHMLRSGERRGPLGSRRPEVRPGELHSP 515
           PH H       + P G RR   RPG + +P
Sbjct: 24  PHQHQHYGAAVQVPQGGRRRAARPGVVTTP 53


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -3

Query: 555 NQGICRTRPSRNPGGSVVPQGGLLAGASR 469
           + G C T     P   V P+G LL   SR
Sbjct: 2   DSGDCETEEDSAPEACVSPEGSLLPSNSR 30


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 163 PRCPPNCSARVDEAFPTAGHSYSK 234
           P   PNC  +     P +GH  S+
Sbjct: 137 PNVTPNCDVKSSVCSPGSGHQDSR 160


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 163 PRCPPNCSARVDEAFPTAGHSYSK 234
           P   PNC  +     P +GH  S+
Sbjct: 137 PNVTPNCDVKSSVCSPGSGHQDSR 160


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 135 LFVTLFIKNTILKSLVQ 85
           LFV L + N +LK LV+
Sbjct: 160 LFVLLIVSNVVLKILVE 176


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 163 PRCPPNCSARVDEAFPTAGHSYSK 234
           P   PNC  +     P +GH  S+
Sbjct: 137 PNVTPNCDVKSSVCSPGSGHQDSR 160


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 417 PGNVCRVCPG 388
           PG  C+ CPG
Sbjct: 101 PGRCCKTCPG 110


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 561 KGRTMYVIPFSMGPVGSP 614
           K  +M ++P+ M P G P
Sbjct: 280 KMASMNIVPYHMSPYGHP 297


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 561 KGRTMYVIPFSMGPVGSP 614
           K  +M ++P+ M P G P
Sbjct: 280 KMASMNIVPYHMSPYGHP 297


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 561 KGRTMYVIPFSMGPVGSP 614
           K  +M ++P+ M P G P
Sbjct: 280 KMASMNIVPYHMSPYGHP 297


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 561 KGRTMYVIPFSMGPVGSP 614
           K  +M ++P+ M P G P
Sbjct: 236 KMASMNIVPYHMSPYGHP 253


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 561 KGRTMYVIPFSMGPVGSP 614
           K  +M ++P+ M P G P
Sbjct: 280 KMASMNIVPYHMSPYGHP 297


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 561 KGRTMYVIPFSMGPVGSP 614
           K  +M ++P+ M P G P
Sbjct: 68  KMASMNIVPYHMSPYGHP 85


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 561 KGRTMYVIPFSMGPVGSP 614
           K  +M ++P+ M P G P
Sbjct: 280 KMASMNIVPYHMSPYGHP 297


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 215 AVGKASSTLAEQF 177
           AVG AS+ LAE F
Sbjct: 182 AVGNASTALAESF 194


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 54  WRNTREFYNKI 22
           W+N RE YN++
Sbjct: 266 WKNLREDYNRL 276


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 54  WRNTREFYNKI 22
           W+N RE YN++
Sbjct: 266 WKNLREDYNRL 276


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 215 AVGKASSTLAEQF 177
           AVG AS+ LAE F
Sbjct: 182 AVGNASTALAESF 194


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 54  WRNTREFYNKI 22
           W+N RE YN++
Sbjct: 266 WKNLREDYNRL 276


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 215 AVGKASSTLAEQF 177
           AVG AS+ LAE F
Sbjct: 182 AVGNASTALAESF 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,247
Number of Sequences: 336
Number of extensions: 3452
Number of successful extensions: 25
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)