Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0665
(686 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0328 + 2535049-2535213,2536611-2537777 36 0.023
05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784 33 0.16
04_03_0853 - 20292734-20292968,20293056-20293144,20293239-202941... 33 0.28
02_05_0683 + 30877731-30878243 33 0.28
11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610 32 0.49
04_04_0140 - 23073032-23073130,23073270-23073338,23073448-230735... 32 0.49
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 31 0.65
06_01_0641 - 4652380-4653771,4653850-4654521,4654536-4654707,465... 31 1.1
08_02_0116 + 12762009-12763021,12763421-12763436 29 2.6
08_02_0083 + 12063349-12063406,12066151-12066480,12066529-120671... 29 2.6
07_03_0001 + 12219741-12219927,12219976-12220955 29 2.6
03_06_0674 - 35449373-35449465,35449959-35450112,35450763-354508... 29 2.6
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 29 3.5
01_01_0070 - 542603-542686,542803-543441 29 3.5
12_01_0872 + 8326873-8327475,8328246-8328575 29 4.6
11_03_0010 - 8922361-8922375,8923888-8924610 29 4.6
07_01_0636 + 4761858-4762421,4763596-4763819,4763961-4764309,476... 29 4.6
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57... 29 4.6
04_04_1288 - 32393674-32393787,32394066-32394158,32394444-323945... 29 4.6
04_04_0462 + 25393733-25394347 29 4.6
01_05_0164 + 18827390-18827710 29 4.6
01_03_0278 - 14509481-14509506,14510700-14512291,14512547-145126... 29 4.6
09_01_0013 - 355103-355435 28 6.0
01_01_1182 + 9423610-9424041,9424654-9424721,9424979-9425177,942... 28 6.0
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 28 8.0
05_07_0215 - 28455890-28457095 28 8.0
02_01_0120 + 884467-887649 28 8.0
>12_01_0328 + 2535049-2535213,2536611-2537777
Length = 443
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = +1
Query: 187 ARVDEAFPTAGHSYSKGPRVRGASAALCQPEHVHVCDGSETEARA 321
ARVD F H+Y + RV G C P HV V DG E A
Sbjct: 330 ARVDAVFAGHVHAYERFARVYGGGEDACGPVHVTVGDGGNREGLA 374
>05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784
Length = 394
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 413 PGLNPARSYAPIGRATWSPRLAPARSPPWGTTLPPGL 523
P PA S A + AT SPR A +PPW T PPG+
Sbjct: 91 PMPTPAASSA-LAPATSSPRPASPPTPPWTTAPPPGI 126
>04_03_0853 -
20292734-20292968,20293056-20293144,20293239-20294111,
20294203-20294364
Length = 452
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 187 ARVDEAFPTAGHSYSKGPRVRGASAALCQPEHVHVCDGSETEARA 321
ARVD F H+Y + RV A C P H+ + DG E A
Sbjct: 329 ARVDIVFAGHVHAYERFTRVYNNEANPCGPVHITIGDGGNREGLA 373
>02_05_0683 + 30877731-30878243
Length = 170
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 519 PGGSVVPQGGLLAG-ASRGDHVALPIGAYERAGFNPGNVC 403
PGGS GG A A+RG VA+P+ A A + GN C
Sbjct: 125 PGGSGASDGGSTAAMAARGSTVAVPVAAAAVARGSRGNTC 164
>11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610
Length = 439
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +1
Query: 187 ARVDEAFPTAGHSYSKGPRVRGASAALCQPEHVHVCDGSETEARA 321
ARVD F H+Y + RV G C HV + DG E A
Sbjct: 333 ARVDAVFAGHVHAYERFARVYGGKEDPCGAVHVTIGDGGNREGLA 377
>04_04_0140 -
23073032-23073130,23073270-23073338,23073448-23073539,
23073637-23074550,23074646-23074779,23075003-23075058,
23077556-23077646
Length = 484
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 222 VASCGEGFVDPRRAVWWAARLHPI 151
V GEG +PRRA WW A H +
Sbjct: 51 VDDAGEGEANPRRAKWWYATFHSV 74
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 489 VRPGELHSPPDYEKAVSD-RFPGCMKGRTMYVIPFSMGPVGSPLSKIG 629
V P EL +YE V D R GC G + V+ P G+P++ +G
Sbjct: 474 VSPDELRDDEEYEDIVQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVG 521
>06_01_0641 -
4652380-4653771,4653850-4654521,4654536-4654707,
4655515-4655690
Length = 803
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 201 SLPHSWPLLLQRSARSWSQRCSV 269
SLPH +PLLL R W RCS+
Sbjct: 78 SLPH-FPLLLHAQRRKWRSRCSI 99
>08_02_0116 + 12762009-12763021,12763421-12763436
Length = 342
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 127 NALYKKHHLEKPRAIF 80
N L K+HH+EKPR +F
Sbjct: 293 NGLRKEHHMEKPRTVF 308
>08_02_0083 +
12063349-12063406,12066151-12066480,12066529-12067174,
12089873-12089933
Length = 364
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 127 NALYKKHHLEKPRAIF 80
N L K+HH+EKPR +F
Sbjct: 300 NGLRKEHHMEKPRTVF 315
>07_03_0001 + 12219741-12219927,12219976-12220955
Length = 388
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 127 NALYKKHHLEKPRAIF 80
N L K+HH+EKPR +F
Sbjct: 232 NGLRKEHHMEKPRTVF 247
>03_06_0674 -
35449373-35449465,35449959-35450112,35450763-35450860,
35450947-35451234,35451313-35451503,35451789-35452006,
35452314-35452653,35452726-35453167
Length = 607
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 184 SARVDEAFPTAGHSYSKGPRVRGASAALCQPEHVHVCDGSETEARA 321
S VD F H+Y + RV + C P H+ V DG E A
Sbjct: 387 SYAVDVVFTGHVHAYERSNRVFNYTLDPCGPVHISVGDGGNREKMA 432
>10_01_0217 +
2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 540 DRFPGCMKGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVY 662
D F +K R V PVG P+ K+G E+ S VY
Sbjct: 567 DSFDLPIKSRQEMVFSDEYKPVGKPIKKVGAELQASGEAVY 607
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 407 TLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTLPP 517
T P +P P AT +P +APA++PP + P
Sbjct: 43 TAPAKSPPAPATPAPTATPTPPVAPAKAPPVAPAVAP 79
>12_01_0872 + 8326873-8327475,8328246-8328575
Length = 310
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -3
Query: 261 SAGSTNARTFGVRVASCGEGFVDPRRAVWWAARLHPIAT*AHLFVTLF 118
S S N +T + SC GF+D + W L+PI F++ F
Sbjct: 240 SRWSNNQQTLCFQCDSCKAGFLDDIKKAWSFDALYPILALVGAFLSCF 287
>11_03_0010 - 8922361-8922375,8923888-8924610
Length = 245
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -3
Query: 492 GLLAG--ASRGDHVALPIGAY-ERAGFNPGNVC 403
G AG A D A IGAY AG+NPG +C
Sbjct: 61 GAAAGMAADAADSAAANIGAYIPEAGYNPGKLC 93
>07_01_0636 +
4761858-4762421,4763596-4763819,4763961-4764309,
4764648-4765331
Length = 606
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 416 GLNPARSYAPIGRATWSPRLAPARSPPWG 502
G++P+R A +P LAPA +P WG
Sbjct: 163 GVSPSRVAVTAAAAEPTPALAPAPAPEWG 191
>07_01_0077 +
566895-567127,567207-567331,571204-571340,571437-571542,
571635-571885,572018-572128,572209-572320,572626-572716,
573168-573507,573678-573900,573946-574204,574274-574481,
574572-574622,574712-574870,574956-575120,575322-575399,
575732-576031,576107-576259,576871-576918,577019-577188,
577738-577852,578462-578623,578789-578893,578969-579199,
579277-579410,579484-579738,579822-580110,580214-580306,
580395-580520,580646-580897
Length = 1693
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 423 IPHVHMLRSGERRGPLGSRRPEVRPGELHS 512
IPH L + + P+ S++P+VR E+H+
Sbjct: 158 IPHSEHLNNDLTQDPVASKKPKVRKKEIHN 187
>04_04_1288 -
32393674-32393787,32394066-32394158,32394444-32394563,
32394765-32394851,32394947-32395168,32395237-32395314,
32395656-32395769,32395865-32395927,32396135-32396245,
32396338-32396559
Length = 407
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = -3
Query: 525 RNPGGSVVPQGGLLAG-----ASRGDHVALPIGAYERAGFNPGNVCR 400
+NPGG++ P GG +AG A+ ++ P G G PG+V R
Sbjct: 207 KNPGGTIAPCGGYVAGKKDLVAAAAARLSAP-GLGVEFGSTPGHVMR 252
>04_04_0462 + 25393733-25394347
Length = 204
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 504 VPQGGLLAGASRGDHVALPIGAYERAGFNPGNVCRVC 394
VP GG G G H + +Y A G+V RVC
Sbjct: 96 VPPGGKAGGVCLGGHSVAAVVSYGGAFLGEGSVGRVC 132
>01_05_0164 + 18827390-18827710
Length = 106
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 452 RATWSPRLAP--ARSPPWGTTLPPGLR 526
R TW P LAP +R PP TT P G R
Sbjct: 46 RTTWRPDLAPTTSRRPPATTTDPHGRR 72
>01_03_0278 -
14509481-14509506,14510700-14512291,14512547-14512638,
14513030-14514412
Length = 1030
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 262 QRWLHERADLWSKSGQLWGRLRRPSQSSLVGSA 164
QR+L D+WS+ W +L+ Q +GSA
Sbjct: 291 QRYLLVLDDVWSRDADKWEKLKASLQHGSIGSA 323
>09_01_0013 - 355103-355435
Length = 110
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 428 ARSYAPIGRATWSPRLAPARSPPW 499
AR A GR W PR P R P W
Sbjct: 28 ARGGAAGGRRAWRPRWRPQRRPRW 51
>01_01_1182 +
9423610-9424041,9424654-9424721,9424979-9425177,
9425349-9425446,9425539-9425608,9425948-9426061,
9427686-9427751
Length = 348
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 434 SYAPIGRATWSPRLAPARSPPWGTTL-PPGLREGRVRQIPWLYERTHNV 577
+Y IG + R R PP TL PPG+ E V + + E T N+
Sbjct: 293 TYGKIGEWRFDKRAYQDRPPPRNLTLPPPGVPESVVTLVKMVNEATANL 341
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 368 NTITVG-WPGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTLPPGLREGRVRQ 544
N + G +P + PG P ++ + + +P + +PP PPGL G VR+
Sbjct: 421 NQLPAGVYPPVGQTAFPGSLPVQTPTVLPQTAATPAITNDPNPPPYPLFPPGLIPGMVRK 480
Query: 545 I 547
+
Sbjct: 481 M 481
>05_07_0215 - 28455890-28457095
Length = 401
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 488 SPPWGTTLPPGLREGRVRQIPWLYERTH 571
+PPW LP + G VR+IP ++R H
Sbjct: 6 APPWAE-LPDAVLLGIVRRIPCAFDRAH 32
>02_01_0120 + 884467-887649
Length = 1060
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 271 GTEQRWLHERADLWSKSGQLWGRLRRPSQSSLVGSAAASNRHL-STSLRNALYK 113
G+ WLHERAD+ + G G L P++ S+ AA HL +TS L++
Sbjct: 855 GSLDHWLHERADV--EGG---GALPWPARLSIARGAARGLAHLHATSEPRVLHR 903
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,782,066
Number of Sequences: 37544
Number of extensions: 459840
Number of successful extensions: 1799
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1797
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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