Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0665
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical pr... 93 1e-19
Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical pr... 93 1e-19
Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical pr... 93 1e-19
Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical pr... 93 1e-19
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 88 5e-18
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 88 5e-18
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 88 5e-18
AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical... 56 2e-08
AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical... 34 0.11
Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical ... 29 4.1
Z92838-9|CAD30449.1| 549|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z92838-7|CAB07405.1| 593|Caenorhabditis elegans Hypothetical pr... 28 5.4
U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 rela... 28 5.4
AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical... 28 5.4
AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical... 28 5.4
AF286206-1|AAK28741.1| 549|Caenorhabditis elegans C kinase adap... 28 5.4
AF286205-1|AAK28740.1| 593|Caenorhabditis elegans C kinase adap... 28 5.4
AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid... 28 5.4
AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell fac... 28 5.4
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 5.4
Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical pr... 28 7.2
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 28 7.2
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 7.2
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical
protein R11A5.4b protein.
Length = 582
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +3
Query: 498 GELHSPPDYEKAVSDRFPGCMKGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVM 677
G +P D + RFPGCM GR MYVIPFSMGPVG PLSKIG+++TDS YVV SMR+M
Sbjct: 145 GHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIM 204
Query: 678 TRI 686
TR+
Sbjct: 205 TRV 207
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/93 (32%), Positives = 49/93 (52%)
Frame = +1
Query: 229 SKGPRVRGASAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDPAD 408
+K R A L +P + +CDGS+ EA +L Y+N ++ RTDP D
Sbjct: 55 AKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDPKD 114
Query: 409 VARVESRTFICSDRESDVVPSARAGQKSALGNY 507
VARVES+T++ + + D V + G + +G++
Sbjct: 115 VARVESKTWMVTKNKYDTVTHTKEGVEPIMGHW 147
>Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical
protein R11A5.4d protein.
Length = 618
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +3
Query: 498 GELHSPPDYEKAVSDRFPGCMKGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVM 677
G +P D + RFPGCM GR MYVIPFSMGPVG PLSKIG+++TDS YVV SMR+M
Sbjct: 109 GHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIM 168
Query: 678 TRI 686
TR+
Sbjct: 169 TRV 171
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/93 (32%), Positives = 49/93 (52%)
Frame = +1
Query: 229 SKGPRVRGASAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDPAD 408
+K R A L +P + +CDGS+ EA +L Y+N ++ RTDP D
Sbjct: 19 AKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDPKD 78
Query: 409 VARVESRTFICSDRESDVVPSARAGQKSALGNY 507
VARVES+T++ + + D V + G + +G++
Sbjct: 79 VARVESKTWMVTKNKYDTVTHTKEGVEPIMGHW 111
>Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical
protein R11A5.4c protein.
Length = 587
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +3
Query: 498 GELHSPPDYEKAVSDRFPGCMKGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVM 677
G +P D + RFPGCM GR MYVIPFSMGPVG PLSKIG+++TDS YVV SMR+M
Sbjct: 78 GHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIM 137
Query: 678 TRI 686
TR+
Sbjct: 138 TRV 140
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/79 (32%), Positives = 44/79 (55%)
Frame = +1
Query: 271 QPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDPADVARVESRTFICSDR 450
+P + +CDGS+ EA +L Y+N ++ RTDP DVARVES+T++ +
Sbjct: 2 RPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDPKDVARVESKTWMVTKN 61
Query: 451 ESDVVPSARAGQKSALGNY 507
+ D V + G + +G++
Sbjct: 62 KYDTVTHTKEGVEPIMGHW 80
>Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical
protein R11A5.4a protein.
Length = 654
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +3
Query: 498 GELHSPPDYEKAVSDRFPGCMKGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVM 677
G +P D + RFPGCM GR MYVIPFSMGPVG PLSKIG+++TDS YVV SMR+M
Sbjct: 145 GHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIM 204
Query: 678 TRI 686
TR+
Sbjct: 205 TRV 207
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/93 (32%), Positives = 49/93 (52%)
Frame = +1
Query: 229 SKGPRVRGASAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDPAD 408
+K R A L +P + +CDGS+ EA +L Y+N ++ RTDP D
Sbjct: 55 AKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDPKD 114
Query: 409 VARVESRTFICSDRESDVVPSARAGQKSALGNY 507
VARVES+T++ + + D V + G + +G++
Sbjct: 115 VARVESKTWMVTKNKYDTVTHTKEGVEPIMGHW 147
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 88.2 bits (209), Expect = 5e-18
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +3
Query: 489 VRP--GELHSPPDYEKAVSDRFPGCMKGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVY 662
VRP G+ S + + RFPGCM GR MYV+P+SMGP+G PLSK G+E+TDSPYVV
Sbjct: 127 VRPIMGQWMSEEQFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVL 186
Query: 663 SMRVMTRI 686
MR MTR+
Sbjct: 187 CMRTMTRM 194
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/92 (32%), Positives = 44/92 (47%)
Frame = +1
Query: 232 KGPRVRGASAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDPADV 411
K R A L P +++CDGS+ E L Y+N +L RTDP DV
Sbjct: 43 KVQRFVAEKAELMNPAGIYICDGSQKEYDDIVDKLVERGVLTPLKAYENNYLCRTDPRDV 102
Query: 412 ARVESRTFICSDRESDVVPSARAGQKSALGNY 507
ARVES+T++ + + D V G + +G +
Sbjct: 103 ARVESKTWMVTKDKYDSVCHTPDGVRPIMGQW 134
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 88.2 bits (209), Expect = 5e-18
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +3
Query: 489 VRP--GELHSPPDYEKAVSDRFPGCMKGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVY 662
VRP G+ S + + RFPGCM GR MYV+P+SMGP+G PLSK G+E+TDSPYVV
Sbjct: 17 VRPIMGQWMSEEQFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVL 76
Query: 663 SMRVMTRI 686
MR MTR+
Sbjct: 77 CMRTMTRM 84
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 88.2 bits (209), Expect = 5e-18
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +3
Query: 489 VRP--GELHSPPDYEKAVSDRFPGCMKGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVY 662
VRP G+ S + + RFPGCM GR MYV+P+SMGP+G PLSK G+E+TDSPYVV
Sbjct: 127 VRPIMGQWMSEEQFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVL 186
Query: 663 SMRVMTRI 686
MR MTR+
Sbjct: 187 CMRTMTRM 194
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/92 (32%), Positives = 44/92 (47%)
Frame = +1
Query: 232 KGPRVRGASAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPQYDNCWLARTDPADV 411
K R A L P +++CDGS+ E L Y+N +L RTDP DV
Sbjct: 43 KVQRFVAEKAELMNPAGIYICDGSQKEYDDIVDKLVERGVLTPLKAYENNYLCRTDPRDV 102
Query: 412 ARVESRTFICSDRESDVVPSARAGQKSALGNY 507
ARVES+T++ + + D V G + +G +
Sbjct: 103 ARVESKTWMVTKDKYDSVCHTPDGVRPIMGQW 134
>AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical
protein H04M03.1 protein.
Length = 624
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +3
Query: 546 FPGCMKGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVMTRI 686
F M GRTMYV+PFSMG +GS + +GV+ITD P +V ++R R+
Sbjct: 173 FDCSMSGRTMYVVPFSMGTIGSRRAVVGVQITDDPVLVLNLRTTFRV 219
>AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical
protein F07B7.14 protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 465 PLGSRRPEVRPGELHSPPDYEKAVSDRFPGCMKGRTMYVIPFSMGPVG 608
P RRPE R ++ +S R C + RT +P S+GP G
Sbjct: 76 PASCRRPEPRSSSQPKENPPKEKISTRLASCRRPRTSSSLPLSLGPSG 123
>Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical
protein ZC376.6 protein.
Length = 1152
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -2
Query: 160 ASNRHLSTSLRNALYKKHHLEKPRAIFVVNLSERQMEKHERV 35
A+ RH SLRN+LY K K +++++ E Q EK E V
Sbjct: 683 AAQRH-DASLRNSLYDKSIFLKLPVRYILSVMEYQHEKFENV 723
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 130 EEMCSSGDWMQPRCPPNCSARVDEAFPTAGHSYSKGPRVRGASAALC-QP-EHVHVCDGS 303
E +C +G +C P A DE F GH+ P GA +C QP H CD S
Sbjct: 598 ENVCHAG-----QCRPCLQASFDEQFCHCGHTVRMPPIPCGARLPVCSQPCVRPHSCDHS 652
>AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical
protein Y43F8C.6 protein.
Length = 422
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 157 MQPRCPPNCSARVDEAFPTAGHSYSK 234
M P N +A+V E F TAGH++ K
Sbjct: 144 MDQPAPVNLAAKVAEVFLTAGHAFQK 169
>Z92838-9|CAD30449.1| 549|Caenorhabditis elegans Hypothetical
protein T03D8.1c protein.
Length = 549
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 429 HVHMLRSGERRGPLGSRRPEVRPGELHSPPDYEKAVSDRFPGCMKGRTMYVIPFSMGP 602
H+ +R + P G+ +R G L +PPD + SD+F M RT+ P P
Sbjct: 267 HMDEIRRISKPRPTGNPALFLRQGSLRAPPDMPSS-SDQFKRNMSLRTVSNNPTERSP 323
>Z92838-7|CAB07405.1| 593|Caenorhabditis elegans Hypothetical
protein T03D8.1a protein.
Length = 593
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 429 HVHMLRSGERRGPLGSRRPEVRPGELHSPPDYEKAVSDRFPGCMKGRTMYVIPFSMGP 602
H+ +R + P G+ +R G L +PPD + SD+F M RT+ P P
Sbjct: 311 HMDEIRRISKPRPTGNPALFLRQGSLRAPPDMPSS-SDQFKRNMSLRTVSNNPTERSP 367
>U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 related
protein 1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +2
Query: 368 NTITVGWP---GQTRQTLP-GLNPAR--SYAPIGRATWSPRLAPARSPP 496
N++ + WP G + L G A+ S +PI RAT SPR P+ PP
Sbjct: 393 NSLEISWPIVQGASGYFLQIGFGDAKEQSVSPIKRATTSPRKQPSIVPP 441
>AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical
protein Y37D8A.23b protein.
Length = 445
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 111 NTILKSLVQFSLLIYQSGKWRNTREFYNKIIAI 13
+ +L++L+ +L Q+G W T EF N+I+ +
Sbjct: 10 DAVLENLIAKEILP-QTGNWEGTEEFLNRIVQV 41
>AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical
protein Y37D8A.23a protein.
Length = 508
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 111 NTILKSLVQFSLLIYQSGKWRNTREFYNKIIAI 13
+ +L++L+ +L Q+G W T EF N+I+ +
Sbjct: 10 DAVLENLIAKEILP-QTGNWEGTEEFLNRIVQV 41
>AF286206-1|AAK28741.1| 549|Caenorhabditis elegans C kinase adapter
1s protein.
Length = 549
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 429 HVHMLRSGERRGPLGSRRPEVRPGELHSPPDYEKAVSDRFPGCMKGRTMYVIPFSMGP 602
H+ +R + P G+ +R G L +PPD + SD+F M RT+ P P
Sbjct: 267 HMDEIRRISKPRPTGNPALFLRQGSLRAPPDMPSS-SDQFKRNMSLRTVSNNPTERSP 323
>AF286205-1|AAK28740.1| 593|Caenorhabditis elegans C kinase adapter
1 protein.
Length = 593
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 429 HVHMLRSGERRGPLGSRRPEVRPGELHSPPDYEKAVSDRFPGCMKGRTMYVIPFSMGP 602
H+ +R + P G+ +R G L +PPD + SD+F M RT+ P P
Sbjct: 311 HMDEIRRISKPRPTGNPALFLRQGSLRAPPDMPSS-SDQFKRNMSLRTVSNNPTERSP 367
>AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid
decarboxylase protein.
Length = 508
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 111 NTILKSLVQFSLLIYQSGKWRNTREFYNKIIAI 13
+ +L++L+ +L Q+G W T EF N+I+ +
Sbjct: 10 DAVLENLIAKEILP-QTGNWEGTEEFLNRIVQV 41
>AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell factor
1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +2
Query: 368 NTITVGWP---GQTRQTLP-GLNPAR--SYAPIGRATWSPRLAPARSPP 496
N++ + WP G + L G A+ S +PI RAT SPR P+ PP
Sbjct: 393 NSLEISWPIVQGASGYFLQIGFGDAKEQSVSPIKRATTSPRKQPSIVPP 441
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/69 (28%), Positives = 26/69 (37%)
Frame = +2
Query: 371 TITVGWPGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTLPPGLREGRVRQIP 550
T+T P T PG P ++ P +T P PW T+PP R IP
Sbjct: 211 TVTPPSPSVTPGGRPGSTPPATFPPGSVSTVRYTPGPTPPAPWTYTVPP---YSGYRTIP 267
Query: 551 WLYERTHNV 577
+Y V
Sbjct: 268 PVYNHYETV 276
>Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical
protein ZC410.4b protein.
Length = 755
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 238 DLWSKSGQLWGRLRRPSQSSLVGSAAASNRHLSTSLRNALYKKHHLEKP 92
+L SG RLRRPSQ S G+ +++ RH + + H ++P
Sbjct: 19 NLRPSSGASGDRLRRPSQMS-AGAQSSATRHSQGDKDKVVQSRIHDQEP 66
>Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical
protein ZC410.4a protein.
Length = 769
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 238 DLWSKSGQLWGRLRRPSQSSLVGSAAASNRHLSTSLRNALYKKHHLEKP 92
+L SG RLRRPSQ S G+ +++ RH + + H ++P
Sbjct: 19 NLRPSSGASGDRLRRPSQMS-AGAQSSATRHSQGDKDKVVQSRIHDQEP 66
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 183 LCEGRRSLPHSWPLLLQRSARSWSQRC 263
L G S PHSWP +Q +R RC
Sbjct: 58 LIGGSESSPHSWPWTVQLLSRLGHHRC 84
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 680 SHDSHRINHVRRIRDFYADLRERRSHRTHR 591
SH S R + R RD + RE R H+ HR
Sbjct: 284 SHRSSRDHRDHRHRDHRGEHREHREHKEHR 313
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein
E01G6.1 protein.
Length = 1391
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +2
Query: 359 DCPNTITVGWPGQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTLPPGLREGRV 538
+ P+ + PG T QT PG PA PIG P + AR LPP L + +
Sbjct: 1013 ETPDVPSSNVPGMT-QTFPGGPPAPGMGPIGMPDPIPGIENAR------ILPPALAQAEM 1065
Query: 539 RQ 544
+
Sbjct: 1066 EK 1067
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical
protein C38D4.3 protein.
Length = 1784
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +3
Query: 486 EVRPGELHSPPDYEKAVSDRFPGCMKGRTMYVIPFS 593
E+ LH DY++ +SD+ +GR++ + P +
Sbjct: 587 ELAEWALHEAVDYKRTISDKMVSLFQGRSLALSPLA 622
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,806,270
Number of Sequences: 27780
Number of extensions: 348927
Number of successful extensions: 1242
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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