Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0664
(741 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31708| Best HMM Match : GTP_CDC (HMM E-Value=0) 121 7e-28
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 111 8e-25
SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42) 83 3e-16
SB_11458| Best HMM Match : GTP_CDC (HMM E-Value=2.6e-09) 67 1e-11
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 67 2e-11
SB_2290| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_6159| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_12556| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_49128| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_12321| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_22915| Best HMM Match : DEAD_2 (HMM E-Value=1.9e-39) 32 0.56
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_39014| Best HMM Match : TPR_2 (HMM E-Value=0.19) 30 2.3
SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_23784| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 29 5.2
SB_9921| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_7841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_32940| Best HMM Match : EGF (HMM E-Value=0) 29 5.2
SB_59345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_22957| Best HMM Match : EGF (HMM E-Value=7e-39) 28 6.9
SB_22355| Best HMM Match : Y_phosphatase (HMM E-Value=0) 28 6.9
SB_59779| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.2e-26) 28 6.9
SB_54445| Best HMM Match : CMV_US (HMM E-Value=3.9) 28 6.9
SB_2152| Best HMM Match : EGF (HMM E-Value=0) 28 6.9
SB_12216| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_52116| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_17035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41) 28 9.1
>SB_31708| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 272
Score = 121 bits (291), Expect = 7e-28
Identities = 51/78 (65%), Positives = 65/78 (83%)
Frame = +2
Query: 20 KTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDE 199
+ QTV ++++TVEIEE+GV+LRLTVVDTPG+ DA+DNT + I+ YID QFE +LRDE
Sbjct: 32 RIGQTVHIESNTVEIEEKGVRLRLTVVDTPGFADAVDNTYSWEPIVDYIDHQFESYLRDE 91
Query: 200 SGLNRRNIVDNRIHCCFY 253
SGLNRRNI+D R+HCC Y
Sbjct: 92 SGLNRRNIMDTRVHCCLY 109
Score = 111 bits (266), Expect = 8e-25
Identities = 50/91 (54%), Positives = 68/91 (74%)
Frame = +1
Query: 235 HSLLFLLISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSRVMEEIER 414
H L+ I+P GHGL+P+D+EFMK LH KVNIVPVIAK+D LTK E+ RLK +V++EI
Sbjct: 105 HCCLYF-INPHGHGLRPVDVEFMKALHTKVNIVPVIAKSDSLTKTEISRLKRKVLDEIAD 163
Query: 415 EGIKIYPLPDCDSDEDEDYKEQVRQLKEAVP 507
IKIY P+CDS++DE++ + LK ++P
Sbjct: 164 HEIKIYSFPECDSEDDEEFLAINKDLKASLP 194
Score = 90.2 bits (214), Expect = 2e-18
Identities = 39/54 (72%), Positives = 48/54 (88%), Gaps = 2/54 (3%)
Frame = +3
Query: 570 YPWGVVEVENPEHCDFIKLRTMLI-THMQDLQEVTQEVHYENYRSERLA-RTGQ 725
YPWG EVENP+HCDFIKLR ML+ THMQDL++VTQ+VHYENYR++RL +TG+
Sbjct: 216 YPWGYAEVENPDHCDFIKLRNMLVRTHMQDLKDVTQDVHYENYRAQRLLDQTGK 269
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 111 bits (266), Expect = 8e-25
Identities = 47/83 (56%), Positives = 62/83 (74%)
Frame = +2
Query: 5 PDATEKTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFER 184
P EK N+TV++ TVE++E GV+LRLTVVDTPG+GDA+DNTDC++ +I+YID +FE
Sbjct: 56 PSIKEKLNKTVEVKPCTVELKEGGVRLRLTVVDTPGFGDAVDNTDCWKPVIKYIDSKFEE 115
Query: 185 FLRDESGLNRRNIVDNRIHCCFY 253
L ES + R DNR+HCC Y
Sbjct: 116 HLNAESRVQRSPFPDNRVHCCLY 138
Score = 85.0 bits (201), Expect = 6e-17
Identities = 36/50 (72%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Frame = +3
Query: 567 LYPWGVVEVENPEHCDFIKLRTMLI-THMQDLQEVTQEVHYENYRSERLA 713
+YPWGVVEVEN EHCDF+ LR MLI THMQDL++VT + HYENYR ++LA
Sbjct: 218 VYPWGVVEVENVEHCDFVALRNMLIRTHMQDLKDVTNDAHYENYRCDKLA 267
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +1
Query: 235 HSLLFLLISPFGHGLKPLDIEFMKQLHNKV 324
H L+ ISP GH LKPLDIEFMK+LHNK+
Sbjct: 134 HCCLYF-ISPTGHSLKPLDIEFMKKLHNKI 162
>SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42)
Length = 275
Score = 82.6 bits (195), Expect = 3e-16
Identities = 34/76 (44%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 QTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGL 208
+TV + + + IEE+GV+L+LT+ DTPG+GD I+N C+ I+ YI+ Q+++FL +E +
Sbjct: 153 KTVDVKSVSHVIEEKGVRLKLTITDTPGFGDQINNDKCWEPIMDYINSQYDKFLTEEVTI 212
Query: 209 NRR-NIVDNRIHCCFY 253
R+ I D+R+HCC Y
Sbjct: 213 ERKPRIPDSRVHCCLY 228
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +1
Query: 208 KPS*HCGQSHSLLFLLISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLK 387
KP + H L+ I+P GH LKP+D+EFMK+L VNIVPVIAKAD +T +E + +
Sbjct: 215 KPRIPDSRVHCCLYF-IAPTGHRLKPIDVEFMKRLDKCVNIVPVIAKADNMTLEEREAFR 273
Query: 388 SR 393
R
Sbjct: 274 RR 275
>SB_11458| Best HMM Match : GTP_CDC (HMM E-Value=2.6e-09)
Length = 337
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = +1
Query: 277 LKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSRVMEEIEREGIKIYPLP 441
LK LD+ MKQL KVNI+P+IAKAD + K E+++ K ++M+E+E G++IY P
Sbjct: 22 LKSLDLVCMKQLDKKVNIIPIIAKADTIAKSELKQFKQKIMDELESNGVEIYRFP 76
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 83 LRLTVVDTPGYGDAIDNTDCFRSI 154
L+LT+VDT GYGD I+ D +S+
Sbjct: 2 LKLTIVDTVGYGDQINKEDSLKSL 25
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 66.9 bits (156), Expect = 2e-11
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +2
Query: 2 IPDATEKTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDN 133
I A E+ +TVK++ STVEIEERGVKLRLTVVDTPGYGD I++
Sbjct: 55 ILSAEERIKKTVKIETSTVEIEERGVKLRLTVVDTPGYGDGINH 98
>SB_2290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +1
Query: 277 LKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSR 393
LKPLDIEFMK LH+ VNIVPVI KAD LT E++ +K R
Sbjct: 2 LKPLDIEFMKALHHIVNIVPVIGKADTLTPTELKEMKRR 40
>SB_6159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/29 (68%), Positives = 27/29 (93%), Gaps = 1/29 (3%)
Frame = +3
Query: 642 THMQDLQEVTQEVHYENYRSERLA-RTGQ 725
THMQDL++VTQ+VHYENYR++RL +TG+
Sbjct: 2 THMQDLKDVTQDVHYENYRAQRLLDQTGK 30
>SB_12556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 642 THMQDLQEVTQEVHYENYRSERLARTGQVPK 734
THMQDL+EVTQ+VHYEN+R+ RL VP+
Sbjct: 2 THMQDLKEVTQDVHYENFRAMRLGEAA-VPR 31
>SB_49128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +2
Query: 5 PDATEKTNQ-TVKLDASTVEIEE-------RGVKLRLTVVDTPGYGDAIDNTDCFRSIIQ 160
P K N+ T + D S E+ E R VKL+ T++ + DA N +C+ +IQ
Sbjct: 8 PSTDSKWNRLTFERDESKYELWEAKCFGYLRMVKLKDTILPSTDEPDATKNEECYAELIQ 67
Query: 161 YIDEQFERFLRDESGLNRRNIV 226
++D++ + E+ + R ++
Sbjct: 68 FLDDKILSLVMREATDDGRKVL 89
>SB_12321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +1
Query: 289 DIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSRVMEEIEREGIKIYPLPDCDSDEDED 468
D+E+ K+ V+IV + T++ +++ + + ++ +K Y P DSDED+
Sbjct: 48 DLEYEKEEEEDVDIVDSDF-SQSETEEVIEQDEDEPKRKKKKTVVKAYRRPKDDSDEDKK 106
Query: 469 YKEQVRQLKEAVPSQCAARASS 534
K+ + K P + R SS
Sbjct: 107 SKQPPKPKKSEAPPREGLRKSS 128
>SB_22915| Best HMM Match : DEAD_2 (HMM E-Value=1.9e-39)
Length = 418
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +1
Query: 358 LTKKEVQRLKSRVMEEIEREGIKIYPLPDCDSDEDEDYKEQVRQLKEAVPSQCAARASSW 537
LT + MEE I I P D D D D+D+K +++ + P Q ++ S
Sbjct: 48 LTSSSSPEMHHPQMEEDGPSEITIEPAADDDDDTDDDFKPPLKRFRTPGPIQPVSKLSER 107
Query: 538 RCAGGG 555
+ G
Sbjct: 108 KSQSSG 113
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Frame = -2
Query: 374 TSFLVRQSALAITGTMLTLLCSCFMNSISRGFN-PCPNGDMSRN---SNECDCPQCYDG 210
+S L+ + L T+ LL + FN PC NG N ECDCP Y G
Sbjct: 2548 SSHLIMTTQLGNATTLQRLLREKVCEDVDECFNDPCTNGGACINLPGDYECDCPNKYTG 2606
>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 442 DCDSDEDEDYKEQVRQLKEAVPSQCAARAS--SWRCAGGGCAAASTPG 579
D D D+D+D + + ++ + A A+ +W GG A+ +TPG
Sbjct: 11 DDDDDDDDDVQVTIGEINTSATGYGAPYATPVNWNFKGGAAASKATPG 58
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 275 PCPNGDMSRNSNECDCPQCYDGLG 204
PC NG N+++C C CY G G
Sbjct: 1625 PCLNGYNYGNASDCVCDACYSGSG 1648
>SB_39014| Best HMM Match : TPR_2 (HMM E-Value=0.19)
Length = 1036
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 286 LDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSRVM--EEIEREGIKIYPLPDCDSDE 459
LD +K+ + ++P I+ C+ E +K R + E+ + ++P P D E
Sbjct: 574 LDSLCIKKYITEAQVIPGISSFHCIEPDEDGFVKCRYYSSQSAEQATVDVFPFPVSDDSE 633
Query: 460 DED 468
D D
Sbjct: 634 DSD 636
>SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -2
Query: 278 NPCPNGDMSRNSN-----ECDCPQCYDGLGRSRLEEIFRTARQCI 159
NPC NG + R + +C CP +DG+ R + + AR C+
Sbjct: 420 NPCENGGICRPGHGGKVFDCSCPSGFDGM-RCEVTKSACKARPCL 463
>SB_23784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 358 LTKKEVQRLKSRVMEEIEREGIKIYPLPDCDSDEDEDYKEQVRQLKEAVPSQ 513
LT + MEE I I P D D D D+D+K +++ + P Q
Sbjct: 3 LTSSSSPEMHHPQMEEDGPSEITIEPAADDDDDTDDDFKPPLKRFRTPGPIQ 54
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 199 LVSKKSFELLVNVLNYGSKTIRVINRVSVAGRVHDGQTQ 83
++SK LL + +Y +T V+N VAGR+ D TQ
Sbjct: 3644 VISKHKVALLQTLKDYDPETELVLNLAIVAGRITDLPTQ 3682
>SB_9921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 274 GLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKE---VQRL-KSRVMEEIEREGIKIYPL 438
G D+ F KQ ++I P + K DCLTK+E +R+ K+R+ E E +K + L
Sbjct: 454 GFTVQDLLFNKQA--TIHIPPFLGKRDCLTKEEELATKRIAKARIHVERFNERLKKFRL 510
>SB_7841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 358 LTKKEVQRLKSRVMEEIEREGIKIYPLPDCDSDEDEDYKEQVRQLK 495
+TK+EV +L+ + E R+ + Y D + + Y+E++RQ++
Sbjct: 10 MTKEEVDKLEKAMKNEEFRKLLVEYAQEISDPENKKRYEEEIRQME 55
>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
Length = 1025
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = -2
Query: 278 NPCPNGDM-SRNSNE--CDCPQCYDG 210
NPC NG + S N CDCPQ Y G
Sbjct: 56 NPCTNGGLCSVNGTNFLCDCPQGYRG 81
>SB_59345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 71 RGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQ 175
R +KL+ T++ + DA N +C+ +IQ+ D +
Sbjct: 38 RMLKLKDTILPSTDAPDATKNEECYAELIQFFDNK 72
>SB_22957| Best HMM Match : EGF (HMM E-Value=7e-39)
Length = 201
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 5/28 (17%)
Frame = -2
Query: 278 NPCPNGDM-----SRNSNECDCPQCYDG 210
NPC NG + RN+ C CPQ Y G
Sbjct: 36 NPCQNGGVCKETFDRNNYTCACPQGYTG 63
>SB_22355| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 1252
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 606 HCDFIKLRTMLITHMQDLQEVTQ--EVHYENY 695
H + LRT L++HMQ+ +E Q + HY ++
Sbjct: 823 HMSYYVLRTFLVSHMQEEEEPRQVRQYHYTSW 854
>SB_59779| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.2e-26)
Length = 452
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 53 TVEIEERGVKLRLTVVDTPGYGDAIDNT 136
TV +EE +LR +VDT G+ D DNT
Sbjct: 251 TVVLEEYLSQLRFNLVDTRGFFDIDDNT 278
>SB_54445| Best HMM Match : CMV_US (HMM E-Value=3.9)
Length = 460
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 358 LTKKEVQRLKSRVMEEIEREGIKIYPLPDCDSD 456
L ++LK +EE E +G+ P+PDC +D
Sbjct: 12 LLPNAAKKLKRMHLEEDENDGLFHCPVPDCHND 44
>SB_2152| Best HMM Match : EGF (HMM E-Value=0)
Length = 1603
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 5/28 (17%)
Frame = -2
Query: 278 NPCPNGDM-----SRNSNECDCPQCYDG 210
NPC NG + RN+ C CPQ Y G
Sbjct: 60 NPCQNGGVCKETFDRNNYTCACPQGYTG 87
>SB_12216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2992
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -2
Query: 719 GAGESLRTIVLIVNFLCDLLEVLHVGNEHGPEFDEVAVLRVLDLDDSPGV 570
G GE +V + F+ + V+ N+ GP D + V + D+ D P V
Sbjct: 2318 GVGERSVLLVDLYKFVRYTIYVVATTNKDGPSSDVIQVFTLEDIPDRPPV 2367
>SB_52116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 429 YLYAFPFDFFHNPRFQSLNFFLSETVRFGDNRY 331
YL+ PF+ + FQ+ FFL+ R DN Y
Sbjct: 751 YLFEKPFNCYRF-LFQATAFFLASNTRINDNNY 782
>SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 612 DFIKLRTMLITHMQDLQEVTQEVHYENYRSERLARTGQVP 731
DF+KL L + ++QE EV +E+ R R Q P
Sbjct: 254 DFVKLSQTLQMQLAEMQESENEVRWEHKDDARECRNCQKP 293
>SB_17035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 175 VRKISSRRERPKPS*HCGQSHSLLFLLISPFGHGLK 282
V++ S RR RPK CG + LF I G GLK
Sbjct: 35 VKRFSDRRIRPKWHATCGLKKNRLFSPIIRCGFGLK 70
>SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41)
Length = 653
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 287 RGFNPCPNGDMSRNSNECD 231
RGF P PNG + NECD
Sbjct: 346 RGFTPKPNGKGCTDINECD 364
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,912,579
Number of Sequences: 59808
Number of extensions: 363214
Number of successful extensions: 1683
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1679
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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