Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0664
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 91 1e-18
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 72 4e-13
AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical... 72 4e-13
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 72 4e-13
Z69635-4|CAB54216.1| 336|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z69635-3|CAA93460.1| 342|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta... 31 1.1
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 30 2.0
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 30 2.0
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical pr... 29 3.5
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 29 3.5
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 29 3.5
AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like se... 29 3.5
AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical... 29 3.5
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 4.6
U97193-13|AAO38676.1| 215|Caenorhabditis elegans Hypothetical p... 29 4.6
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 29 4.6
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 29 4.6
U64857-10|AAC25860.1| 265|Caenorhabditis elegans Hypothetical p... 28 6.0
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 90.6 bits (215), Expect = 1e-18
Identities = 41/89 (46%), Positives = 60/89 (67%)
Frame = +1
Query: 241 LLFLLISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSRVMEEIEREG 420
L I P GHGLKP+DIE MK LH +VNIVPVI+KADCLT+ E+ R K +++++ E
Sbjct: 160 LCLYFIEPSGHGLKPIDIELMKHLHGRVNIVPVISKADCLTRDELLRFKKQIVKDAETAE 219
Query: 421 IKIYPLPDCDSDEDEDYKEQVRQLKEAVP 507
IK+Y P+ + + K + +L++A+P
Sbjct: 220 IKLYKFPELEDPYTD--KVAIEKLRKALP 246
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +2
Query: 32 TVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGLN 211
TV+++ V++ E V L LT+VDTPG+GDA++N+ C+ I+ Y++ +F +E+ ++
Sbjct: 89 TVRVEEKLVKLVENSVSLNLTLVDTPGFGDAVNNSKCWEPIVNYVESKFFEQFCEETRID 148
Query: 212 R-RNIVDNRIHCCFY 253
R IVD +H C Y
Sbjct: 149 RGEKIVDKCVHLCLY 163
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/48 (54%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +3
Query: 570 YPWGVVEVENPEHCDFIKLRTMLI-THMQDLQEVTQEVHYENYRSERL 710
YPWG VEVEN +H DF+ LR M+I T++ D+ +VT+ VHYEN+R ++
Sbjct: 268 YPWGTVEVENMQHNDFLTLRDMIIRTNLIDMIDVTRNVHYENFRFRQM 315
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 72.1 bits (169), Expect = 4e-13
Identities = 35/90 (38%), Positives = 55/90 (61%)
Frame = +1
Query: 235 HSLLFLLISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSRVMEEIER 414
H+ L+ ISP GHGLK LD+ +++L +VN++PVIAK+D K E+ R K++++ E++
Sbjct: 206 HACLYF-ISPTGHGLKALDLVTLRELAKRVNVIPVIAKSDTTCKDELLRFKAKILSELKS 264
Query: 415 EGIKIYPLPDCDSDEDEDYKEQVRQLKEAV 504
+ I IY P D KE + + AV
Sbjct: 265 QKIDIYTFPTDDETVSTTNKEMNKSVPFAV 294
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +3
Query: 570 YPWGVVEVENPEHCDFIKLRTMLI-THMQDLQEVTQEVHYENYRSERL 710
YPWG+VEVEN HCDF+KLR L+ T++ ++++ T E YENYR +RL
Sbjct: 314 YPWGIVEVENESHCDFVKLREALLRTNVDEMRQRTHESLYENYRRDRL 361
Score = 61.3 bits (142), Expect = 7e-10
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = +2
Query: 29 QTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGL 208
+TV+L T ++ E G++++L +V+T G+GD +D + I+ Y++ QFE +L++E
Sbjct: 134 KTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETYLQEELKP 193
Query: 209 NR--RNIVDNRIHCCFY 253
R + D+RIH C Y
Sbjct: 194 RRMLQYFNDSRIHACLY 210
>AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical
protein Y50E8A.4b protein.
Length = 461
Score = 72.1 bits (169), Expect = 4e-13
Identities = 35/90 (38%), Positives = 55/90 (61%)
Frame = +1
Query: 235 HSLLFLLISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSRVMEEIER 414
H+ L+ ISP GHGLK LD+ +++L +VN++PVIAK+D K E+ R K++++ E++
Sbjct: 206 HACLYF-ISPTGHGLKALDLVTLRELAKRVNVIPVIAKSDTTCKDELLRFKAKILSELKS 264
Query: 415 EGIKIYPLPDCDSDEDEDYKEQVRQLKEAV 504
+ I IY P D KE + + AV
Sbjct: 265 QKIDIYTFPTDDETVSTTNKEMNKSVPFAV 294
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +3
Query: 570 YPWGVVEVENPEHCDFIKLRTMLI-THMQDLQEVTQEVHYENYRSERL 710
YPWG+VEVEN HCDF+KLR L+ T++ ++++ T E YENYR +RL
Sbjct: 314 YPWGIVEVENESHCDFVKLREALLRTNVDEMRQRTHESLYENYRRDRL 361
Score = 61.3 bits (142), Expect = 7e-10
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = +2
Query: 29 QTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGL 208
+TV+L T ++ E G++++L +V+T G+GD +D + I+ Y++ QFE +L++E
Sbjct: 134 KTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETYLQEELKP 193
Query: 209 NR--RNIVDNRIHCCFY 253
R + D+RIH C Y
Sbjct: 194 RRMLQYFNDSRIHACLY 210
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 72.1 bits (169), Expect = 4e-13
Identities = 35/90 (38%), Positives = 55/90 (61%)
Frame = +1
Query: 235 HSLLFLLISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSRVMEEIER 414
H+ L+ ISP GHGLK LD+ +++L +VN++PVIAK+D K E+ R K++++ E++
Sbjct: 275 HACLYF-ISPTGHGLKALDLVTLRELAKRVNVIPVIAKSDTTCKDELLRFKAKILSELKS 333
Query: 415 EGIKIYPLPDCDSDEDEDYKEQVRQLKEAV 504
+ I IY P D KE + + AV
Sbjct: 334 QKIDIYTFPTDDETVSTTNKEMNKSVPFAV 363
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +3
Query: 570 YPWGVVEVENPEHCDFIKLRTMLI-THMQDLQEVTQEVHYENYRSERL 710
YPWG+VEVEN HCDF+KLR L+ T++ ++++ T E YENYR +RL
Sbjct: 383 YPWGIVEVENESHCDFVKLREALLRTNVDEMRQRTHESLYENYRRDRL 430
Score = 61.3 bits (142), Expect = 7e-10
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = +2
Query: 29 QTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGL 208
+TV+L T ++ E G++++L +V+T G+GD +D + I+ Y++ QFE +L++E
Sbjct: 203 KTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETYLQEELKP 262
Query: 209 NR--RNIVDNRIHCCFY 253
R + D+RIH C Y
Sbjct: 263 RRMLQYFNDSRIHACLY 279
>Z69635-4|CAB54216.1| 336|Caenorhabditis elegans Hypothetical
protein F19B6.2b protein.
Length = 336
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Frame = +1
Query: 277 LKPLDIEFMKQLHNKVNIVPVIAKADCLTKKE-------VQRLKSRVMEEIEREGIKIYP 435
LKP+ +EF+ + K + + K CLTK + Q L+ V++ + I
Sbjct: 123 LKPMSLEFLNITNPKAVLEVELRKYACLTKNDRIPTSYAGQTLEFLVVDLKPANSVCIIE 182
Query: 436 LP-DCDSDEDEDYKEQVRQLKEAVPSQCAARASSWRCAGGGCAAAS 570
+ D D E Y EQ RQ+ AV ++ A +S G A S
Sbjct: 183 CDVNLDFDPPEGYVEQPRQVTPAVTAKPPAPDASAFIGAGQKAGGS 228
>Z69635-3|CAA93460.1| 342|Caenorhabditis elegans Hypothetical
protein F19B6.2a protein.
Length = 342
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Frame = +1
Query: 277 LKPLDIEFMKQLHNKVNIVPVIAKADCLTKKE-------VQRLKSRVMEEIEREGIKIYP 435
LKP+ +EF+ + K + + K CLTK + Q L+ V++ + I
Sbjct: 129 LKPMSLEFLNITNPKAVLEVELRKYACLTKNDRIPTSYAGQTLEFLVVDLKPANSVCIIE 188
Query: 436 LP-DCDSDEDEDYKEQVRQLKEAVPSQCAARASSWRCAGGGCAAAS 570
+ D D E Y EQ RQ+ AV ++ A +S G A S
Sbjct: 189 CDVNLDFDPPEGYVEQPRQVTPAVTAKPPAPDASAFIGAGQKAGGS 234
>AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta
family protein 3 protein.
Length = 1092
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 289 DIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSRVMEEIEREGIKIYPLPDCDSDEDE- 465
D+E + + + K + + ++EVQ + S +++++E G ++ P D D+D+
Sbjct: 752 DVEILASFMTTIGSCIEVMKTEGIAEEEVQLIISVLLKQLENYGKRMSDRPVEDEDDDDA 811
Query: 466 DYKEQVRQLKE 498
+ KE++ E
Sbjct: 812 EAKEELDYFME 822
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 278 NPCPNGDMS---RNSNECDCPQCYDGLGRSRLEEIFR 177
NPC NG + R S CDCP + G G + E++FR
Sbjct: 550 NPCSNGGVCHQHRESFSCDCPPGFYGNGCEQ-EKMFR 585
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 278 NPCPNGDMS---RNSNECDCPQCYDGLGRSRLEEIFR 177
NPC NG + R S CDCP + G G + E++FR
Sbjct: 550 NPCSNGGVCHQHRESFSCDCPPGFYGNGCEQ-EKMFR 585
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 328 IVPVIAKADCLTKKEVQRLKSRVMEEIEREGIKIYPLPDCDSDEDEDYKEQVRQLK 495
++ +A A+ K E+ RLK + EI + + L + + + K+Q QLK
Sbjct: 524 LIAALADAEARMKSEISRLKKKYQAEIAELEMTVDNLNRANIEAQKTIKKQSEQLK 579
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 621 KLRTMLITHMQDLQEVTQEVHYENYRSER 707
KL T L T DL EVT+E+H + R+ R
Sbjct: 657 KLETELSTAQADLDEVTKELHAADERANR 685
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 328 IVPVIAKADCLTKKEVQRLKSRVMEEIEREGIKIYPLPDCDSDEDEDYKEQVRQLK 495
++ +A A+ K E+ RLK + EI + + L + + + K+Q QLK
Sbjct: 524 LIAALADAEARMKSEISRLKKKYQAEIAELEMTVDNLNRANIEAQKTIKKQSEQLK 579
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 621 KLRTMLITHMQDLQEVTQEVHYENYRSER 707
KL T L T DL EVT+E+H + R+ R
Sbjct: 657 KLETELSTAQADLDEVTKELHAADERANR 685
>Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical
protein C05D12.3c protein.
Length = 1001
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 329 MLTLLCSCFMNSIS-RGFNPCPNGDMSRNSNECDCP 225
+L LL + F S+S + C NG NS C CP
Sbjct: 3 ILLLLGATFFFSVSINAYEQCENGGTPINSTACQCP 38
>Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical
protein C05D12.3a protein.
Length = 1039
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 329 MLTLLCSCFMNSIS-RGFNPCPNGDMSRNSNECDCP 225
+L LL + F S+S + C NG NS C CP
Sbjct: 3 ILLLLGATFFFSVSINAYEQCENGGTPINSTACQCP 38
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/63 (25%), Positives = 39/63 (61%)
Frame = +1
Query: 364 KKEVQRLKSRVMEEIEREGIKIYPLPDCDSDEDEDYKEQVRQLKEAVPSQCAARASSWRC 543
K++ ++ K + + +E+E KI D DSD+++D K + ++ +++ ++ + ++S +
Sbjct: 165 KEKREKKKRKEKKRLEKENRKIKEEDDEDSDDEDDEKAK-KKKRKSKGAEKSKPSTSKKD 223
Query: 544 AGG 552
AGG
Sbjct: 224 AGG 226
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 328 IVPVIAKADCLTKKEVQRLKSRVMEEIEREGIKIYPLPDCDSDEDEDYKEQVRQLK 495
++ +A A+ K E+ RLK + EI + + L + + + K+Q QLK
Sbjct: 540 LIAALADAEARMKSEISRLKKKYQAEIAELEMTVDNLNRANIEAQKTIKKQSEQLK 595
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 621 KLRTMLITHMQDLQEVTQEVHYENYRSER 707
KL T L T DL EVT+E+H + R+ R
Sbjct: 673 KLETELSTAQADLDEVTKELHAADERANR 701
>AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like
serine/threonine kinase protein.
Length = 596
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 448 DSDEDEDYKEQVRQLKEAVPSQCAARASSWRCAGG--GCAAASTP 576
+SD+D D +++ R+ K+ S A+ A + AGG G AA+ P
Sbjct: 439 ESDDDSDLEDEEREKKKKKASASASGAGAAGAAGGATGGAASGAP 483
>AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical
protein Y59A8B.23 protein.
Length = 596
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 448 DSDEDEDYKEQVRQLKEAVPSQCAARASSWRCAGG--GCAAASTP 576
+SD+D D +++ R+ K+ S A+ A + AGG G AA+ P
Sbjct: 439 ESDDDSDLEDEEREKKKKKASASASGAGAAGAAGGATGGAASGAP 483
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/64 (29%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 364 KKEVQRLKSRVMEE-IEREGIKIYPLPDCDSDEDEDYKEQVRQLKEAVPSQCAARASSWR 540
KKE + K R ++ +E+E KI D DSD+++D K + ++ +++ ++ + ++S +
Sbjct: 164 KKEKREKKERKEKKRLEKENRKIKEEDDEDSDDEDDEKAK-KKKRKSKGAEKSKPSTSKK 222
Query: 541 CAGG 552
AGG
Sbjct: 223 DAGG 226
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 278 NPCPNGDMSRNSNECDCPQCYDG 210
+PC NG + +N+ C+C Y G
Sbjct: 453 HPCKNGGVCKNTGYCECQYGYTG 475
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 278 NPCPNGDMSRNSNECDCPQCYDG 210
+PC NG + +N+ C+C Y G
Sbjct: 453 HPCKNGGVCKNTGYCECQYGYTG 475
>U97193-13|AAO38676.1| 215|Caenorhabditis elegans Hypothetical
protein C06A5.8b protein.
Length = 215
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 361 TKKEVQRLKSRVMEEIEREGIKIYPLPDCDSDEDEDYKEQVRQLKEAVPSQCAARAS 531
TK +++ L V E + ++ Y + +SDEDE+ E ++E CA + S
Sbjct: 102 TKADLEVLCDSVKEAVYEADLE-YSYDEEESDEDEEENEDEEDVEEEEEKPCAEKKS 157
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 361 TKKEVQRLKSRVMEEIEREGIKIYPLPDCDSDEDEDYKEQVRQLKEAVPSQCAARAS 531
TK +++ L V E + ++ Y + +SDEDE+ E ++E CA + S
Sbjct: 170 TKADLEVLCDSVKEAVYEADLE-YSYDEEESDEDEEENEDEEDVEEEEEKPCAEKKS 225
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 278 NPCPNGDMSRNSNECDCPQCYDG 210
+PC NG + +N+ C+C Y G
Sbjct: 453 HPCKNGGVCKNTGYCECQYGYTG 475
>U64857-10|AAC25860.1| 265|Caenorhabditis elegans Hypothetical
protein C37C3.3 protein.
Length = 265
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 65 EERGVKLRLT-VVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRD 196
E+R V + + PG+ +AID D R ++ E ++ L D
Sbjct: 183 EQREVAKEIADAISNPGFNNAIDEADLLRELVDLEQEALDKDLLD 227
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = -2
Query: 278 NPCPNGDMS---RNSNECDCPQCYDGLGRSRLEE 186
NPC NG NS CDCP+ + G EE
Sbjct: 388 NPCKNGGTCIAVENSAYCDCPEHFFGRACEEEEE 421
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = -2
Query: 278 NPCPNGDMS---RNSNECDCPQCYDGLGRSRLEE 186
NPC NG NS CDCP+ + G EE
Sbjct: 388 NPCKNGGTCIAVENSAYCDCPEHFFGRACEEEEE 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,795,353
Number of Sequences: 27780
Number of extensions: 262956
Number of successful extensions: 1259
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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