BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0664 (741 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 23 2.3 X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 23 4.0 EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 23 4.0 AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 23 4.0 AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 4.0 AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 23 4.0 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 4.0 DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 21 9.2 >AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 protein. Length = 232 Score = 23.4 bits (48), Expect = 2.3 Identities = 9/41 (21%), Positives = 18/41 (43%) Frame = +2 Query: 125 IDNTDCFRSIIQYIDEQFERFLRDESGLNRRNIVDNRIHCC 247 + N D FR+I + E F + + + + + + CC Sbjct: 106 VKNDDNFRNISEKYQEIFNGYFLNSESKDFIDFIQKNLQCC 146 >X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha protein. Length = 461 Score = 22.6 bits (46), Expect = 4.0 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +2 Query: 80 KLRLTVVDTPGYGDAIDN 133 K +T++D PG+ D I N Sbjct: 84 KYYVTIIDAPGHRDFIKN 101 >EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-alpha protein. Length = 172 Score = 22.6 bits (46), Expect = 4.0 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +2 Query: 80 KLRLTVVDTPGYGDAIDN 133 K +T++D PG+ D I N Sbjct: 11 KYYVTIIDAPGHRDFIKN 28 >AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-alpha protein. Length = 274 Score = 22.6 bits (46), Expect = 4.0 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +2 Query: 80 KLRLTVVDTPGYGDAIDN 133 K +T++D PG+ D I N Sbjct: 27 KYYVTIIDAPGHRDFIKN 44 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 22.6 bits (46), Expect = 4.0 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = -2 Query: 299 NSISRGFNPCPNGDMSRNSNECDCPQCYDGLG 204 N+ + G N NG+ + N+N C+ GLG Sbjct: 248 NNNNNGANDNGNGNGASNNNNNGDMFCHTGLG 279 >AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha F2 protein. Length = 461 Score = 22.6 bits (46), Expect = 4.0 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +2 Query: 80 KLRLTVVDTPGYGDAIDN 133 K +T++D PG+ D I N Sbjct: 84 KYYVTIIDAPGHRDFIKN 101 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 22.6 bits (46), Expect = 4.0 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = +2 Query: 641 YPHAGPPRGHTGSS 682 Y H PP GH SS Sbjct: 510 YHHVAPPSGHHASS 523 >DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. Length = 120 Score = 21.4 bits (43), Expect = 9.2 Identities = 10/40 (25%), Positives = 19/40 (47%) Frame = +1 Query: 397 MEEIEREGIKIYPLPDCDSDEDEDYKEQVRQLKEAVPSQC 516 MEE G PD D+ + + ++ K+ +P++C Sbjct: 1 MEEFRHNGRDFEYCPDLDNVTMPETTPRRKKNKKPLPTEC 40 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 167,373 Number of Sequences: 438 Number of extensions: 3038 Number of successful extensions: 12 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23144850 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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