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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0663
         (525 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0616 - 18052596-18053779,18053935-18054099,18056236-180562...    34   0.080
02_01_0033 + 202703-202705,203397-203458,203566-203665,203875-20...    31   0.57 
03_05_1011 + 29658144-29658310,29659531-29659676,29660526-296606...    31   0.75 
02_02_0096 - 6727844-6727957,6728149-6728247,6728332-6728410,672...    29   1.7  
12_01_0428 + 3374519-3375423,3376663-3376742,3377206-3377217,337...    29   3.0  
06_01_0603 - 4350124-4350590,4350995-4353608                           28   5.3  
04_04_0717 - 27525117-27525248,27525384-27525549,27525629-275258...    28   5.3  
03_05_1139 - 30689514-30689609,30689795-30689956,30691245-306912...    28   5.3  
10_01_0326 + 3574129-3574329,3575144-3575692,3575914-3576072,357...    27   7.0  
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948...    27   7.0  
03_01_0418 - 3211687-3211933,3212016-3212164,3212443-3212551,321...    27   9.2  

>04_03_0616 -
           18052596-18053779,18053935-18054099,18056236-18056260,
           18057259-18057312,18057354-18057619,18058633-18059371
          Length = 810

 Score = 33.9 bits (74), Expect = 0.080
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +1

Query: 199 CKKTYNDTG---QSSGC*DAYKKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAE 369
           CKK Y        S+GC  ++    IM      R+K+  LR   + + E + +H+ LRA+
Sbjct: 229 CKKGYQGNPYLQDSNGCQGSFLHCQIMSLSARSREKQVKLRRMSLCVPEGRAQHSWLRAK 288

Query: 370 WDK 378
             K
Sbjct: 289 GTK 291


>02_01_0033 +
           202703-202705,203397-203458,203566-203665,203875-203916,
           204264-204305,204437-204589,206559-207221
          Length = 354

 Score = 31.1 bits (67), Expect = 0.57
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +1

Query: 226 QSSGC*DAYKKQN-IMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDM 402
           + S C    KKQ  +M+ +   R+KE +L    M+L++   +   L + W  S+GEL++ 
Sbjct: 45  EKSLCSIRQKKQKMLMDQILELREKEMNLLKENMVLRD---QCKALSSPWSTSVGELKNK 101

Query: 403 KA 408
           +A
Sbjct: 102 QA 103


>03_05_1011 +
           29658144-29658310,29659531-29659676,29660526-29660602,
           29660682-29660804,29661817-29661924,29661995-29662075,
           29662157-29662309,29662469-29662540,29662745-29662863,
           29662958-29663071,29663176-29663221,29664865-29664933,
           29665662-29665808,29666410-29666706
          Length = 572

 Score = 30.7 bits (66), Expect = 0.75
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
 Frame = -1

Query: 327 YHLKMTKTGFLISIVCQGFHYIL--FLVSISASRALSGVVISFFTACVC---ATHFTVTF 163
           YH  +T  G+  ++V  G H ++  FL + +  R+L+  ++  + A      A  FT+ +
Sbjct: 334 YHFDLTTGGYR-ALVFSGDHDLILPFLSTQAWIRSLNFSIVDEWRAWHVDGQAAGFTILY 392

Query: 162 SNNLIAATSPYSLMISSVL 106
           +NNL  AT   SL +S+ L
Sbjct: 393 ANNLTFATVKVSLFLSTSL 411


>02_02_0096 -
           6727844-6727957,6728149-6728247,6728332-6728410,
           6728534-6728634,6728740-6728808,6729180-6729220,
           6729992-6730836,6730924-6731027,6731479-6732354
          Length = 775

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
 Frame = +3

Query: 30  YLYSPPNLSF*ER-----NLYH*LHK*RNKSRPKKSLKNTV-M*QLSNY*RRSL*NALHK 191
           Y+  PPNLS         +LY  LH+  ++    + LK  + + +  NY   S    +H+
Sbjct: 663 YVTQPPNLSILTEYLPRGSLYRLLHRPNSQIDETRRLKMALDVAKGMNYLHASHPTIVHR 722

Query: 192 HML*KNL*RHRTELWMLRCLQETKYNGSLD 281
            +   NL   +   W+++CL ET++  +LD
Sbjct: 723 DLKSPNLLVDKN--WVVKCLHETEHLDTLD 750


>12_01_0428 +
           3374519-3375423,3376663-3376742,3377206-3377217,
           3377337-3377379,3378304-3380332
          Length = 1022

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +1

Query: 364 AEWDKSLGELRDMKAAVSDDEEMDTNSAYYVRLRTLVSKMEMIRWL-IGN 510
           AE   +LG+L+++   V   ++M  N+    +L + +SKM  +RWL IGN
Sbjct: 789 AEEIGALGQLQELAIFVDTGKKM--NNGVVKKLASSLSKMYSLRWLDIGN 836


>06_01_0603 - 4350124-4350590,4350995-4353608
          Length = 1026

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 261 LFLVSISASRALSGVVISFFTACVCATHFTVTFSNNLIAATSPYS 127
           L+ + +S +R   G+  + F  C C     V  +NN +A   PYS
Sbjct: 153 LYFLDLSGNRLSGGIPATLF--CNCTALQYVDLANNSLAGDIPYS 195


>04_04_0717 -
           27525117-27525248,27525384-27525549,27525629-27525831,
           27525911-27526048,27526642-27526725,27526864-27526950,
           27527048-27527120,27527169-27527432,27527692-27527768,
           27527886-27527957,27528049-27528209,27528238-27528484,
           27528588-27528707,27528846-27528929,27529205-27529341,
           27529689-27529856,27530093-27530317,27530865-27530952,
           27531033-27531194,27532797-27532919
          Length = 936

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
 Frame = +1

Query: 250 YKKQNIMEALTNYRDKETSLRHFEMILQEKQYEHN----LLRAEWDKSLGELRDMKAAVS 417
           YK Q + E L  ++ +  +L +    L+EKQ  HN    L+ + W++ + +L+      S
Sbjct: 49  YKNQKLSEQLEAHKFEYRALENKFAGLKEKQRTHNETLSLVNSSWEQLVADLKSRSFCKS 108

Query: 418 DDEEMDTNSAY 450
                   S +
Sbjct: 109 GSPNSSPGSGH 119


>03_05_1139 -
           30689514-30689609,30689795-30689956,30691245-30691299,
           30691695-30691959,30692749-30692959,30693542-30693721,
           30693802-30693899,30694211-30694277,30694897-30694963,
           30695335-30695447,30695988-30696032,30696116-30696223,
           30696582-30696791,30697464-30697670,30697786-30697875,
           30698168-30698389
          Length = 731

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 409 LPSYPSIHRAIYPTQPATSCARTVSLVISSQNDED 305
           +PS P  H  + P+ PAT+      L  SS +D+D
Sbjct: 40  VPSPPPPHHLVVPSAPATTFMDQEELPESSSSDDD 74


>10_01_0326 +
           3574129-3574329,3575144-3575692,3575914-3576072,
           3576349-3577543,3577626-3577762,3578052-3578242,
           3578888-3579218
          Length = 920

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +1

Query: 223 GQSSGC*DAYKKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNL 357
           GQSSGC        + E +T       + +H + +  E+Q +H L
Sbjct: 410 GQSSGCQQISNATVVQECMTPQMHPIVAQQHHKQMPNEQQQQHRL 454


>01_03_0303 + 14792842-14792949,14793659-14793760,14794657-14794800,
            14794906-14794986,14795078-14795147,14795267-14795337,
            14795427-14795594,14796030-14796074,14796449-14796511,
            14796594-14796869,14797858-14797971,14798099-14798225,
            14798315-14798484,14798743-14798841,14799577-14799630,
            14801487-14801522,14801741-14801844,14801952-14802186,
            14802377-14802609,14802846-14803346,14803422-14803716,
            14805796-14805881,14806952-14807064,14807303-14807385,
            14808014-14808866,14809215-14809364,14809963-14811146
          Length = 1854

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = +1

Query: 139  CSSYQIIREGHCEMRCTNTCCKKTYNDTGQSSGC*DAYKKQNIMEALTNY 288
            C++   I  G     C + C K   ND+    GC     + NI + L +Y
Sbjct: 1257 CNTLSYIYNGEYTTACASVCAKAPTNDSCDGVGC----CQNNIAKGLNSY 1302


>03_01_0418 -
           3211687-3211933,3212016-3212164,3212443-3212551,
           3212650-3212840,3212967-3213102,3213216-3213716,
           3213819-3213923,3214008-3214095,3214195-3214266,
           3214692-3214762,3215726-3216008,3216388-3216463
          Length = 675

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +3

Query: 75  YH*LHK*RNKSRPKKSLKNT 134
           Y  L K RNKSR KKS+K T
Sbjct: 76  YQSLSKERNKSREKKSMKGT 95


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,688,539
Number of Sequences: 37544
Number of extensions: 260966
Number of successful extensions: 751
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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