Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0663
(525 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6723| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17) 29 1.8
SB_5862| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_49262| Best HMM Match : Virus_P-coat (HMM E-Value=1.8) 29 2.3
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 29 2.3
SB_31417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_48008| Best HMM Match : M (HMM E-Value=0.0068) 28 5.4
SB_34989| Best HMM Match : Tropomyosin (HMM E-Value=3.2) 28 5.4
SB_9139| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_57690| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 7.2
SB_53454| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47) 27 7.2
SB_36049| Best HMM Match : WD40 (HMM E-Value=2e-07) 27 7.2
SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032) 27 7.2
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 27 9.5
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_22729| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 27 9.5
>SB_6723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 33.1 bits (72), Expect = 0.14
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 139 CSSYQIIREGHCEMRCTNTCCKKTYNDTGQSSGC 240
C+ Y I GHC +R C + Y+D+G + C
Sbjct: 100 CNMYDAIVNGHCRLRGRAICSQDLYSDSGININC 133
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = -1
Query: 324 HLKMTKTGFLISIVCQGFHYILFLVSISASRALSGVVISFFTACVCATHFTVTFSNNLI- 148
HL GFL S VC LF + R S V FT + +V + +
Sbjct: 900 HLCSRGFGFLFSPVCSRVFTCLFACVHLSVRVCSPVRSRVFTCLFACVYLSVRVCSPVCS 959
Query: 147 -AATSPYSLMISSVLTCSVIC 88
A TS ++ SV CS +C
Sbjct: 960 RAFTSLFACFPMSVRVCSPVC 980
>SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17)
Length = 1426
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 274 ALTNYRDKETSLRHFEMILQEK-QYEHNLLRAEWDKSLGELRDMKAAVSDDEEMD 435
A+ +RD+ + +R I +EK YE L + E L E+R++ A ++E++
Sbjct: 579 AMAEWRDRVSRIRMGYKIAEEKLSYEEPLTKLEISDKLEEIRELNAVPFINQELN 633
>SB_5862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2353
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 225 SGVVISFFTACVCATHFTVTFSNNLIAATSPYSLMISSVLTCSVI-CGVSDTGFALRSL 52
+GV+I++ A + T N L+ +PY+ V C+ CG+ D F LR+L
Sbjct: 809 NGVIIAYGIIVDGAQYNTSLVRNKLVTGLTPYTRYAFQVTACTAQGCGIGDRKF-LRTL 866
>SB_49262| Best HMM Match : Virus_P-coat (HMM E-Value=1.8)
Length = 586
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = -1
Query: 261 LFLVSISASRALSGVVISFFTACVCATHFTVTFSNNLIAATSPYSLMISSVLTCSVICGV 82
L LVS SRA VVI++ C+ T +L + ++I+ V+ GV
Sbjct: 4 LSLVSSKTSRAFKAVVITWTKTCIAIYCRVCTKKGDLFSIVVRVVVVIAEVVNLMAFLGV 63
Query: 81 SDTGFAL 61
S + L
Sbjct: 64 SSGTYDL 70
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 298 ETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVS-DDEEMDTNSAYYVRLRT 468
ET+ F L+EK+Y LRAE S G++ ++ ++ E + N YV +T
Sbjct: 754 ETAKEGFRKELREKEYLIEKLRAEKSASDGQIESLRRQITYVQSEKEKNVTLYVEGQT 811
>SB_31417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 68 KPVSLTPQITEQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAV 202
+P+ P TE +K I+E+ V IKLL + K H++
Sbjct: 3 QPLYALPHNTESLKESISIEEFMQVTFIKLLSNIVYKLFEFNHSI 47
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 256 KQNIMEALTNYRDKETS--LRHFEMILQEKQYE 348
K ++ +LTN +ET L HF++ LQ KQY+
Sbjct: 806 KLEVLSSLTNSPSEETMAYLNHFKVPLQNKQYK 838
>SB_48008| Best HMM Match : M (HMM E-Value=0.0068)
Length = 1068
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 289 RDKETSLRHFEMILQEKQY---EHNLLRAEWDKSLGELRDMKAAVSDDEEMDT 438
+D ET R F +++ ++ E+N + EW+K L + + A E DT
Sbjct: 373 KDLETYRRKFSVVIHQQGLLYDEYNQKKQEWEKESQALDEARKAAELAREQDT 425
>SB_34989| Best HMM Match : Tropomyosin (HMM E-Value=3.2)
Length = 314
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 92 ITEQVKTEEIIKEYGD---VAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRNK 262
ITE TE+I KE D A L+ +V VKC+ T A++ T + + T NK
Sbjct: 216 ITENDSTEDIAKELADRLEEAKTDLIHRV-VKCIGHTKALQLFEETLEIQEQGGIPTANK 274
>SB_9139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +1
Query: 214 NDTGQSSGC*DAYKKQNIMEAL---TNYRD-KETSLRHFEMILQEKQYEHNLLRAEWDKS 381
N+T Q+ KK+NI +A T R+ KE R E IL K+ +L +W
Sbjct: 91 NETSQNLNNNKKEKKKNIQQANYGNTKRRNSKENYERGHEKILNRKESATSLSNIKWSAP 150
Query: 382 LGELRD 399
++RD
Sbjct: 151 FTQVRD 156
>SB_57690| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 364
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 162 SNNLIAATSPYSLMISSVLTCSVICGVSDTG 70
S++L +T PY+L+ + + S IC +S TG
Sbjct: 3 SSSLEVSTRPYALLYTEAIFLSFICLISLTG 33
>SB_53454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 310 RHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVSDDEEMDTNSAYYVRLRTLVSKMEM 489
R F++ L EK+Y+ N+L+ DK + R++ AA D S +R+L E
Sbjct: 7 RSFQLFLDEKRYKWNILK---DKQFMKSRNLLAARRKSLVKDGKSNEPQAIRSLTESEED 63
Query: 490 IRWLIGNWLF 519
+ G + F
Sbjct: 64 ALFASGQFGF 73
>SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47)
Length = 626
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 253 KKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWD 375
K +IMEA + + +R E + Q+ + EH+ L+ E D
Sbjct: 232 KDNDIMEANVRLGEMQQKIRRLEALCQDFKKEHSSLKNERD 272
>SB_36049| Best HMM Match : WD40 (HMM E-Value=2e-07)
Length = 711
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = -1
Query: 306 TGFLISIVCQGFHYILFLVSISASRALSGVVISFFTACV----CATHFTVTFSNNLIAAT 139
T +I I C + I+ ++ I+ + + C+ C T+T S++L+A++
Sbjct: 257 TSIIIIITCSIINIIVVVIIITNITVIIAIFFIITNICIIIITCIIFITITSSSSLLASS 316
Query: 138 SPYSLMISSVLTCSVIC 88
S + S T V C
Sbjct: 317 SLCAAGNGSQATKCVAC 333
>SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032)
Length = 1293
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 256 KQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLR---AEWDKSLGELRDMKAAVSDDE 426
K+++ + ++ ETS+ ++ L+EK E++LLR A+ KSL E D+ + +
Sbjct: 1193 KRDVDMLNSRLQNGETSVDSLKLDLREKGAENDLLRLEIAKITKSLKEKEDLLGSAGEKH 1252
Query: 427 EMD 435
E +
Sbjct: 1253 EAE 1255
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 283 NYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVSDDEEM 432
N ++KE + E LQEK+ + +R D+++ EL KA + + E M
Sbjct: 83 NVQEKERMIEELEAKLQEKELDVQSVRDAKDRNIEEL---KAKLQEREAM 129
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 256 KQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLR---AEWDKSLGELRDMKAAVSDDE 426
K+++ + ++ ETS+ ++ L+EK E++LLR A+ KSL E D+ + +
Sbjct: 1249 KRDVDMLNSRLQNGETSVDSLKLDLREKGAENDLLRLEIAKITKSLKEKEDLLGSAGERH 1308
Query: 427 EMD 435
E +
Sbjct: 1309 EAE 1311
>SB_22729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/55 (23%), Positives = 20/55 (36%)
Frame = +1
Query: 352 NLLRAEWDKSLGELRDMKAAVSDDEEMDTNSAYYVRLRTLVSKMEMIRWLIGNWL 516
N R WD + G S D +N ++V + M WL +W+
Sbjct: 72 NTTRMRWDLATGRTPSGDTGPSLDHTTHSNKGFFVYIEASRVAMGSKAWLSSDWM 126
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 367 EWDKSLGELRDMKAAVSDDEEMDTNSAYYVRLRT 468
+W ++ G ++ S+D TN YY+ + T
Sbjct: 460 DWTRATGSTASVQTGPSNDHTYGTNKGYYMYIET 493
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,341,511
Number of Sequences: 59808
Number of extensions: 321600
Number of successful extensions: 1130
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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