Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0663
         (525 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    29   0.095
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   2.7  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   4.7  
AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding pr...    23   4.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   8.3  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 29.1 bits (62), Expect = 0.095
 Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +1

Query: 256 KQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVSD-DEEM 432
           KQ   EA T  +  E  L+H + +L++KQ   N   A + +   +L  ++  +   + E+
Sbjct: 406 KQKSAEATTAIKQSEMELKHSQQLLRDKQKNMNSSDAAYLEDKRKLTKVEGQIGQLEREL 465

Query: 433 DTNSAYYVRLRTLVSKMEMIR 495
            +       + TL  + + ++
Sbjct: 466 QSTGYEEGSMETLAGRRQALQ 486


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -1

Query: 105 TCSVICGVSDTGFALRSLSLEENRDSSC 22
           T S I  + D G A RS     NRD  C
Sbjct: 555 TISAIQSLVDAGKASRSFGQTNNRDKRC 582


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 235 QSSVRCRYKFFYSMC 191
           + + R RY FFY++C
Sbjct: 376 EGTTRLRYTFFYAVC 390


>AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding
           protein AgamOBP11 protein.
          Length = 192

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -3

Query: 409 LPSYPSIHRAIYPTQPATSC-ARTVSLVISSQNDE 308
           L  +PS    I+P  P T C  R V++ +    DE
Sbjct: 75  LQRFPSYLSGIFPEDPETKCFLRCVAIKLGVYCDE 109


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 331 QEKQYEHNLLRAEWDKSLGELRDMKAAVSDDEEMD 435
           + KQ E    RAE +   G  +  K    DDE+ D
Sbjct: 35  EAKQRELERKRAEGESDFGRKKKKKEIRYDDEDED 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,687
Number of Sequences: 2352
Number of extensions: 11515
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)