Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0663
         (525 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538130-1|CAD98031.1|  986|Homo sapiens hypothetical protein pr...    31   3.3  
BC060862-1|AAH60862.1|  985|Homo sapiens ring finger protein 111...    31   3.3  
AK131304-1|BAD18471.1|  994|Homo sapiens protein ( Homo sapiens ...    31   3.3  
AL049766-3|CAI22429.1| 1270|Homo sapiens zinc finger, NFX1-type ...    30   4.3  
BC040452-1|AAH40452.1|  563|Homo sapiens family with sequence si...    30   5.7  
BC001096-1|AAH01096.2|  563|Homo sapiens family with sequence si...    30   5.7  

>BX538130-1|CAD98031.1|  986|Homo sapiens hypothetical protein
           protein.
          Length = 986

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 271 EALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKS 381
           + +T+  DKE S+RH + IL  K   H+    +W ++
Sbjct: 151 DTVTSDEDKEVSVRHSQTILNAKSRSHSARSHKWPRT 187


>BC060862-1|AAH60862.1|  985|Homo sapiens ring finger protein 111
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 271 EALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKS 381
           + +T+  DKE S+RH + IL  K   H+    +W ++
Sbjct: 151 DTVTSDEDKEVSVRHSQTILNAKSRSHSARSHKWPRT 187


>AK131304-1|BAD18471.1|  994|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16278 fis, clone NT2RI3001132, highly  similar
           to Mus musculus Arkadia (Arkadia) mRNA. ).
          Length = 994

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 271 EALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKS 381
           + +T+  DKE S+RH + IL  K   H+    +W ++
Sbjct: 151 DTVTSDEDKEVSVRHSQTILNAKSRSHSARSHKWPRT 187


>AL049766-3|CAI22429.1| 1270|Homo sapiens zinc finger, NFX1-type
            containing 1 protein.
          Length = 1270

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -1

Query: 228  LSGVVISFFTACVCATHFTVTFSNNLIAATSPYSLMISSVLTC 100
            +SG+++SFF   + +  F +  S +   A+ P+S    +VL C
Sbjct: 1123 ISGMILSFFKLTIRSARFQLLLSGSWTTASFPFSRSRFAVLIC 1165


>BC040452-1|AAH40452.1|  563|Homo sapiens family with sequence
           similarity 114, member A1 protein.
          Length = 563

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = +2

Query: 98  EQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLI 214
           E+ KT+ I + Y  +++I+ L +VT +C+ Q H V +LI
Sbjct: 433 EEKKTKTIEEVY--MSSIESLAEVTARCIEQLHKVAELI 469


>BC001096-1|AAH01096.2|  563|Homo sapiens family with sequence
           similarity 114, member A1 protein.
          Length = 563

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = +2

Query: 98  EQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLI 214
           E+ KT+ I + Y  +++I+ L +VT +C+ Q H V +LI
Sbjct: 433 EEKKTKTIEEVY--MSSIESLAEVTARCIEQLHKVAELI 469


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,964,441
Number of Sequences: 237096
Number of extensions: 1381941
Number of successful extensions: 3516
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3511
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)