Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0662
         (795 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024493-3|AAB70322.2|  319|Caenorhabditis elegans Hypothetical ...    33   0.31 
Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical pr...    32   0.54 
U28991-8|AAM22060.1|  517|Caenorhabditis elegans Hypothetical pr...    31   0.95 
U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical pr...    31   0.95 
U28991-6|AAK68313.1|  624|Caenorhabditis elegans Hypothetical pr...    31   0.95 
Z70754-5|CAA94775.1|  304|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z78410-11|CAB01639.2|  315|Caenorhabditis elegans Hypothetical p...    28   6.7  
AF098986-6|AAC67427.1|  484|Caenorhabditis elegans Hypothetical ...    28   8.9  

>AF024493-3|AAB70322.2|  319|Caenorhabditis elegans Hypothetical
           protein F23F1.3 protein.
          Length = 319

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 577 VLGGTVIV-DLEGITLRHVATLTPTVAYQIVSLMGLANPTRVKGAHL 714
           ++G T+++    G   +H+ ++TP VA+Q +    L N TR+K  HL
Sbjct: 71  IIGCTLVLYRSNGYNFQHIISITPEVAFQKLISEYLRNGTRIKKFHL 117


>Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical
           protein T23G5.2a protein.
          Length = 719

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
 Frame = +2

Query: 275 DDEYLLRYLRARNFVVPRAHKLLVRYCTFREQQRSLYEGVDLWGL-VKVQDAYEGSMFDR 451
           +D +LLR+LRAR+F V +A K +V       +Q ++ + ++ W     ++  + G   + 
Sbjct: 276 NDAHLLRFLRARDFDVAKA-KDMVHASIIWRKQHNVDKILEEWTRPTVIKQYFPGCWHNS 334

Query: 452 PDVGR-LPIFRFGMWD 496
              GR + I RFG  D
Sbjct: 335 DKAGRPMYILRFGQLD 350


>U28991-8|AAM22060.1|  517|Caenorhabditis elegans Hypothetical
           protein F08F8.9c protein.
          Length = 517

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -1

Query: 510 RNSFGSHIPNRNIGSLPTSGLSNMEPSYASCTFTKPHRSTPS 385
           RN +       +  ++PTSG SN+ PSY +  ++     TPS
Sbjct: 333 RNHWNPQSATSDYSTVPTSGTSNVFPSYQTSEYSSFPNQTPS 374


>U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical
           protein F08F8.9a protein.
          Length = 626

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -1

Query: 510 RNSFGSHIPNRNIGSLPTSGLSNMEPSYASCTFTKPHRSTPS 385
           RN +       +  ++PTSG SN+ PSY +  ++     TPS
Sbjct: 333 RNHWNPQSATSDYSTVPTSGTSNVFPSYQTSEYSSFPNQTPS 374


>U28991-6|AAK68313.1|  624|Caenorhabditis elegans Hypothetical
           protein F08F8.9b protein.
          Length = 624

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -1

Query: 510 RNSFGSHIPNRNIGSLPTSGLSNMEPSYASCTFTKPHRSTPS 385
           RN +       +  ++PTSG SN+ PSY +  ++     TPS
Sbjct: 333 RNHWNPQSATSDYSTVPTSGTSNVFPSYQTSEYSSFPNQTPS 374


>Z70754-5|CAA94775.1|  304|Caenorhabditis elegans Hypothetical
           protein F58E6.5 protein.
          Length = 304

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +2

Query: 269 RTDDEYLLRYLRA-RNFVVPRAHKLLVRYCTFREQQRSLYEGVD 397
           +T+D + + Y+ A +N V+ +A K   + CT + +   L++GV+
Sbjct: 83  KTNDRFTVVYIAASKNVVIEKAWKNAHKTCTMKHKIAILFQGVN 126


>Z78410-11|CAB01639.2|  315|Caenorhabditis elegans Hypothetical
           protein C51E3.4 protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 634 TLTPTVAYQIVSLMGLANPTRVKGAHLINYSWILNTF-FYLFKKSYR 771
           TLT T++Y+I S+   A   ++     +N++   N F FY     YR
Sbjct: 225 TLTNTLSYEITSVAFTAQLMQMYAGITVNFAAASNAFIFYAINSEYR 271


>AF098986-6|AAC67427.1|  484|Caenorhabditis elegans Hypothetical
           protein C36C9.5 protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = -1

Query: 555 PNLNHRHAGPNQVLHRNSFGSHIPNRNIGSLPTSGLSNMEPSYASCTFTKPHRSTP 388
           PN    H      LH NS G+H    N+    TSGL    P +   T++  H S P
Sbjct: 263 PNFTTNHDHTYCKLHNNSSGAHRTYFNV----TSGLP--RPGHNGSTYSMLHNSMP 312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,460,024
Number of Sequences: 27780
Number of extensions: 382692
Number of successful extensions: 1077
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)