Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0661
         (487 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75712-4|CAB00043.1|  694|Caenorhabditis elegans Hypothetical pr...    73   8e-14
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr...    29   1.4  
AF039720-8|AAB96701.2|   85|Caenorhabditis elegans Hypothetical ...    29   1.4  
AF100675-1|AAC69003.2|  370|Caenorhabditis elegans Hypothetical ...    29   2.4  
U88169-11|AAB42238.2|  308|Caenorhabditis elegans C-type lectin ...    28   4.1  
AL021466-1|CAA16282.1|  308|Caenorhabditis elegans Hypothetical ...    28   4.1  
U55370-6|AAA97997.1|  150|Caenorhabditis elegans Hypothetical pr...    27   7.2  
U37430-2|AAL08045.2|  802|Caenorhabditis elegans Hypothetical pr...    27   7.2  

>Z75712-4|CAB00043.1|  694|Caenorhabditis elegans Hypothetical
           protein K04G2.6 protein.
          Length = 694

 Score = 73.3 bits (172), Expect = 8e-14
 Identities = 32/76 (42%), Positives = 52/76 (68%)
 Frame = +1

Query: 256 YLPELTNPIVACFSESESRVRYQAAEALFNVLKIVRGASLSQFPVIFDALAKLAADPEQQ 435
           Y  +L  PI+ CF +++ ++RY A E+L+N+ KI + + L+ F  IFD L ++ AD +Q 
Sbjct: 89  YTAKLVEPIIPCFHDADLQIRYYACESLYNIAKICKTSVLAHFEDIFDVLWRVTADSDQN 148

Query: 436 VKHAAELLDRLLKDIV 483
           V+  AELL+RL+ +IV
Sbjct: 149 VRGGAELLNRLITEIV 164



 Score = 72.1 bits (169), Expect = 2e-13
 Identities = 31/85 (36%), Positives = 53/85 (62%)
 Frame = +2

Query: 8   YAPLSIACVRGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKLIKVLGQDLMSSTNP 187
           Y P+S   +R + DK YE+RK A +++EK+V+D  +    SQ+ K + VLG +L++S N 
Sbjct: 6   YGPISAGIIRSITDKSYERRKAAALDVEKLVRDLFNNNQLSQLDKCLSVLG-ELINSGNS 64

Query: 188 NMKNGALMGLSTVAVGLGKASVVTY 262
           N + G L+G++  ++ LG  +   Y
Sbjct: 65  NQRKGGLIGMAAASIALGNKNAPPY 89


>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical protein
            ZK430.1 protein.
          Length = 1650

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = +1

Query: 262  PELTNPIVACFSESESRVRYQAAEALFNVLKIVRGASLSQFPVIFDALAKLAADPEQQVK 441
            PEL N I+    +S +++RY+A   L  ++K +         ++   L +L  D  +QV+
Sbjct: 1566 PELLNKIMLKTRDSRAKIRYRALIVLELLIKEIGDGVQPHLSILLPFLNELIEDENKQVE 1625


>AF039720-8|AAB96701.2|   85|Caenorhabditis elegans Hypothetical
           protein F33D11.8 protein.
          Length = 85

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -2

Query: 150 LINFFIWLVFFASLKSFTIFSISTPATFLFSYN 52
           ++ FF++L+FFA L SFT  +I   + FL SY+
Sbjct: 1   MVKFFVFLLFFAFLCSFT-SAIPLRSLFLRSYD 32


>AF100675-1|AAC69003.2|  370|Caenorhabditis elegans Hypothetical
           protein Y55H10A.2 protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -2

Query: 156 KTLINFFIWLVFFASLKSFTIFSISTPATFLFSYNLSQSPRTQAMLSGA 10
           KT++NF I+++ +  L++  +F I       +S  L+   R+ A  S A
Sbjct: 263 KTMVNFMIYMIRYRELRNIILFKIIACLPQKWSIPLAMKLRSTAEASNA 311


>U88169-11|AAB42238.2|  308|Caenorhabditis elegans C-type lectin
           protein 53 protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 202 STYGSVYCSSGAWQGISSYLPELTNPI 282
           S+    Y   GAW G  +  P++TNP+
Sbjct: 70  SSQAQKYMDGGAWIGAQASAPDVTNPL 96


>AL021466-1|CAA16282.1|  308|Caenorhabditis elegans Hypothetical
           protein VF36H2L.1 protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = +1

Query: 214 SVYCSSGAWQGISSYLPE--LTNPIVACFSESESRVRY--QAAEALFNVLKIVRGASLSQ 381
           S+  SS AW G+S+ LP+  L +  V   ++  SRV Y     +A   + KI R   +S 
Sbjct: 45  SLLFSSLAWLGLSTVLPDTFLLSLTVCIIAQELSRVAYFMLLKKAQRGLNKITRQGQISV 104

Query: 382 FPVIFD 399
            P + D
Sbjct: 105 APGVSD 110


>U55370-6|AAA97997.1|  150|Caenorhabditis elegans Hypothetical
           protein K03B4.2 protein.
          Length = 150

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +2

Query: 113 DAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMGLSTVA 229
           D+ + + +KK      +D +S+T PN+  G+  G  T+A
Sbjct: 34  DSSSLTSMKKAAAAAAKDQVSTTPPNLVIGSNGGAGTIA 72


>U37430-2|AAL08045.2|  802|Caenorhabditis elegans Hypothetical
           protein K09F5.6 protein.
          Length = 802

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 159 PKTLINFFIWLVFFASLKSFTIFSISTPATFLFSYNL 49
           P  ++N FI LV FA       + +S P + +FS +L
Sbjct: 216 PLEMVNLFIALVAFAIAYPAVFWRVSKPFSVIFSLHL 252


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,217,942
Number of Sequences: 27780
Number of extensions: 192897
Number of successful extensions: 532
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)