Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0658
(755 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 33 0.19
SB_59402| Best HMM Match : DUF1690 (HMM E-Value=3.4) 32 0.44
SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_5523| Best HMM Match : Extensin_2 (HMM E-Value=0.0052) 30 2.3
SB_49486| Best HMM Match : MARVEL (HMM E-Value=1.6) 29 3.1
SB_34061| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05) 28 7.1
SB_304| Best HMM Match : UPF0154 (HMM E-Value=0.32) 28 7.1
SB_26792| Best HMM Match : Herpes_BLRF2 (HMM E-Value=0.15) 28 7.1
SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44) 28 7.1
SB_22025| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.12) 28 7.1
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_27802| Best HMM Match : Filament (HMM E-Value=0.2) 28 9.4
SB_22524| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +1
Query: 163 EKIDKSLAQTFMKKTKAKPRAKNQQTLLDIMPSLIKEIKQKLKVPVTRAKKMPLRNQQFK 342
E+ID L F +KT P K ++ D + +KE+K K K+ + +K ++ +
Sbjct: 867 ERIDGPLMSIFKRKTSTVPSDKEKK---DNEKARLKEMKDKEKIEKEKREKDKREREEKE 923
Query: 343 QMGKFQQLRKKLK 381
+ + QQL K+ K
Sbjct: 924 RKRRQQQLEKEKK 936
>SB_59402| Best HMM Match : DUF1690 (HMM E-Value=3.4)
Length = 339
Score = 32.3 bits (70), Expect = 0.44
Identities = 30/113 (26%), Positives = 49/113 (43%)
Frame = +1
Query: 121 EIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIMPSLIKEIKQKLKVPV 300
E + D N+L + E + +L Q K K +P A + L +L + +K+K K
Sbjct: 111 EPEIDKNALSNSKTENFESALEQQV--KGKKEPAAVGGKKPLTKDANLTENLKEKNKSSR 168
Query: 301 TRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLT 459
R KK+ + Q + GK + + KKL + A S K L+ +T
Sbjct: 169 RRKKKLKNKKPQVENEGK-ENVDKKLLTEEKFAWRKSLSEDETENKKDLERVT 220
>SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -1
Query: 413 WLIIGATRI*TFSFFLSCWNFPICLNCWFLRGIFFARVTGT-FSFCFISLIKLGMMSKRV 237
WL+I T + TF+ F+S I + L G F TGT SFCF + L + K +
Sbjct: 411 WLLITRTLLVTFALFISL----IVPHFGLLMG-FIGSFTGTCLSFCFPCIAHLKLKWKYL 465
Query: 236 CWFLARG-FALVFF 198
W+ G L+ F
Sbjct: 466 RWYHILGELVLIVF 479
>SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1331
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 217 PRAKNQQTLLDIMPSLIKEIKQKLKVPVTRAKKMPLRNQQFKQMGKFQQLRK-KLKVQIL 393
P +K + I P E +KVP +K L ++ K + +++LRK K ++ I+
Sbjct: 799 PVSKMDSPCISIPPDSAIENPSAVKVPKEPVEKKYLHAEELKPLNSYKELRKFKKEITIV 858
Query: 394 VAPMMSHQN 420
++ + N
Sbjct: 859 ISEGLPQDN 867
>SB_5523| Best HMM Match : Extensin_2 (HMM E-Value=0.0052)
Length = 532
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 361 QLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLHQL--RNKNHQ 489
Q RK K + + P HQ H++ T K+LT H + + + HQ
Sbjct: 92 QPRKHQKYHVTLTPPRKHQTYHVTLTPPRKHLTYHSMLTQPRKHQ 136
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 367 RKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLH 465
RK L Q+ + P HQ H++ T K+LT H
Sbjct: 159 RKHLTYQVTLTPPRKHQTYHVTLTPPRKHLTYH 191
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 361 QLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLHQL--RNKNHQ 489
Q RK K + + P HQ H++ T K+LT H + + + HQ
Sbjct: 300 QPRKHQKYHVTLTPPRKHQTYHVTLTPPRKHLTYHSMLTQPRKHQ 344
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +1
Query: 361 QLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLH-----QLRNKNHQMTAT 501
Q RK + + P HQ H+ T K+LT H +N+N+Q+T T
Sbjct: 339 QPRKHQTYHVTLTPPRKHQTYHVMLTPPRKHLTYHVTLTPPSKNQNYQVTLT 390
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 367 RKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLHQL--RNKNHQ 489
RK L + + P HQ H++ T K+LT H + + + HQ
Sbjct: 263 RKHLTYHVTLTPPRKHQTYHVTLTPPRKHLTYHSMLTQPRKHQ 305
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 367 RKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLH-QLRNKNHQMTATVM 507
RK L + + P HQ H++ T K+LT H L + +T VM
Sbjct: 445 RKHLTYHVTLTPPRKHQTYHVTLTPPRKHLTYHSMLTQPSKHLTYHVM 492
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 367 RKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLH 465
RK L + + P HQ H++ T K+LT H
Sbjct: 211 RKHLTYHVTLTPPRKHQTYHVTLTPPRKHLTYH 243
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 367 RKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLH 465
RK L + + P HQ H++ T K+LT H
Sbjct: 237 RKHLTYHVTLTPPRKHQTYHVTLTPPRKHLTYH 269
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +1
Query: 370 KKLKVQILVAPMMSHQNRHLSPTKQLKNLTLH-----QLRNKNHQMTAT 501
K Q+ + P HQ H+ T+ K+LT H +N+N+ +T T
Sbjct: 381 KNQNYQVTLTPPHKHQTYHVMLTQPSKHLTYHVTLTPPSKNQNYHVTLT 429
>SB_49486| Best HMM Match : MARVEL (HMM E-Value=1.6)
Length = 260
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/51 (21%), Positives = 26/51 (50%)
Frame = -1
Query: 476 FLSWCNVKFFNCLVGLRCLFWWLIIGATRI*TFSFFLSCWNFPICLNCWFL 324
+L C + ++G+ CL W + + + +++ WNF + L+ +F+
Sbjct: 1 WLPLCAFAMYRLVIGIYCLAWMMFVETDEGYKWFLYINHWNF-LALSLYFI 50
>SB_34061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +1
Query: 265 IKEIKQKL--KVPVTRAKKMPLRNQQFKQMGKFQQLRKKL 378
I++IKQ + K+P+T +KK+P R+ F + F + K+
Sbjct: 262 IRDIKQAIRCKLPITSSKKLPNRHTAFNILKYFSRFLFKI 301
>SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05)
Length = 493
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 160 LEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIMPSLIKEIKQKLKVPVTRAKKMPLRNQQF 339
L++ K LA + K+KP+ K +T + L KEI+ K + T+ + +
Sbjct: 308 LKQTKKKLATPLREVIKSKPKLK--ETKKKLATPLRKEIQSKPALKETKKRLATPIRAEI 365
Query: 340 KQMGKFQQLRKKLKVQI 390
+ K ++ +KKL +
Sbjct: 366 ESKPKLKETKKKLATPV 382
>SB_304| Best HMM Match : UPF0154 (HMM E-Value=0.32)
Length = 701
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/59 (22%), Positives = 32/59 (54%)
Frame = +1
Query: 94 KNFKMNLTTEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIMPSLIK 270
++ N+T +AD+ +++H Y ++ + + MK K K +K + L ++ +L++
Sbjct: 144 RHVNTNVTDTSKADMKAILHNYGAELSEERIKECMKALKTKKFSKLEFCLRQLILALVE 202
>SB_26792| Best HMM Match : Herpes_BLRF2 (HMM E-Value=0.15)
Length = 221
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +1
Query: 310 KKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLHQLRNKNHQ 489
+++ N+ K+ KF++ KKL+ + AP + L QL NL+LH L+NK Q
Sbjct: 31 RELTKENRHLKK--KFRECEKKLR-SMSTAPASGQIAKSLV---QLCNLSLHLLKNKIRQ 84
Query: 490 MTATVM 507
++ + +
Sbjct: 85 VSISTV 90
>SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44)
Length = 788
Score = 28.3 bits (60), Expect = 7.1
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Frame = +1
Query: 172 DKSLAQTFMK-KTKAKPRAKNQQTLLDIMPSLIKEIKQKLKVPVTRAKKMPLRNQQFKQM 348
DK L+ + KT R + D L+ E Q+L+ + +
Sbjct: 401 DKELSDIRSQLKTVETKRVVVETDYKDKYEGLMAEKLQELREDYDSDARSFKEETELLYS 460
Query: 349 GKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLHQLRNKNHQMTATV 504
KF++LR + + + +NR+LS + + +HQL KN+ + + V
Sbjct: 461 SKFEELRIQRERDSEALAKLREENRNLSKSVDELSSQVHQLEAKNNALVSRV 512
>SB_22025| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.12)
Length = 495
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/62 (20%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 163 EKIDKSLAQTFMKKTKAKPRAKNQQTLLDIMPSLIKEIKQKLKVPVTRA-KKMPLRNQQF 339
E+ ++ + +K+K ++ + LD + + +K++K+K K P +A +++ + NQ+
Sbjct: 180 EQHQSTIEKQDQEKSKLTQTCRDLKAKLDTLRAELKKLKEKRKTPDDKAMEELDMENQKL 239
Query: 340 KQ 345
++
Sbjct: 240 QE 241
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/81 (23%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 52 TVEAGNKEIH*ILDKNFKMNLTTE-IQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAK 228
T++ G E IL +N ++ E ++A++++L + E++ + Q+ +P
Sbjct: 500 TIKRGRAEYERILKENAELKDENEALKAEIDALKPKIEEEV---VVQSAAPVAAGEPDFD 556
Query: 229 NQQTLLDIMPSLIKEIKQKLK 291
+++ L D++ + ++E+KQKL+
Sbjct: 557 DKEQL-DMLENELREVKQKLE 576
>SB_27802| Best HMM Match : Filament (HMM E-Value=0.2)
Length = 528
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 85 ILDKNFKMNLTTEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQ 237
IL+ K + + ++ D N L+H+ K D SLA+ MK+ K K +AK ++
Sbjct: 124 ILELKNKHSDSIKLAEDTNRLLHEVQRKND-SLAKD-MKRVKEKLKAKEKE 172
>SB_22524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 27.9 bits (59), Expect = 9.4
Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Frame = -1
Query: 482 FLFLSW---CNVKFFNCLVGLRCLFWWLIIGATRI*TF--SFFLSCWNFPICLNCWFLRG 318
FLF+ W V F+N +V L L TF S WN P CW+
Sbjct: 170 FLFIRWQAYSFVMFYNFIVALALLSTSATGNHNEGKTFGLSILYLVWNVPASFLCWYRPA 229
Query: 317 IFFARVTGTFSFCFISLI 264
+ +FS+ LI
Sbjct: 230 YKALKNDSSFSYIIFFLI 247
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,199,722
Number of Sequences: 59808
Number of extensions: 292045
Number of successful extensions: 1207
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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