Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0656
         (735 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0168 - 21466431-21466445,21467053-21467160,21467222-214673...    91   6e-19
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677...    69   5e-12
03_05_0167 - 21448714-21448846,21449748-21449870,21450024-214503...    28   8.8  

>03_05_0168 -
           21466431-21466445,21467053-21467160,21467222-21467365,
           21467778-21467846,21467928-21468071,21468409-21468565,
           21468671-21468767,21469015-21469297,21469382-21469507,
           21470098-21470178,21471990-21472072,21472393-21472478,
           21473329-21473422,21473516-21473681,21473777-21473851,
           21474082-21474157,21474259-21474347
          Length = 630

 Score = 91.5 bits (217), Expect = 6e-19
 Identities = 44/96 (45%), Positives = 66/96 (68%), Gaps = 20/96 (20%)
 Frame = +2

Query: 503 LCGHPGKTKKGELSIIPKNIKLLAPCLHMLPHLH--------------------FGLKDK 622
           +CG+PGK+K+GELSI PK I +L+PCLHM+P                       + L+D+
Sbjct: 191 VCGYPGKSKRGELSIFPKKIVVLSPCLHMMPRQKSEGSAVPTPWAPGMGRNIEKYVLRDQ 250

Query: 623 ETRFRKRYLDLILNDKVRQIFYTRAKIIAYVRRFLD 730
           ETR+R+RYLDL++N +VR IF TR+K+++++R+FLD
Sbjct: 251 ETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLD 286



 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
 Frame = +3

Query: 273 EFIEKYQNLNNGDVLENVTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYETE 452
           ++IEKY+++N GD L +VT  +AGR+ + R   +KL+FYDL   G K+QV A+A+  E E
Sbjct: 113 DYIEKYKSMNVGDKLVDVTECLAGRIMTKRAQSSKLLFYDLYGGGEKVQVFADARTSELE 172

Query: 453 D-KFFKDTDKLRRGDIIGCVAIQVKLRK-ENFLLSRKI 560
           D +F K    L+RGDI+G      K ++ E  +  +KI
Sbjct: 173 DNEFIKFHSTLKRGDIVGVCGYPGKSKRGELSIFPKKI 210



 Score = 34.3 bits (75), Expect = 0.10
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 133 KKPSKQEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKF 252
           K+ +  +EE+ P +YY+ R  A+ +LK  G+   +PYPHKF
Sbjct: 68  KESAADDEEMDPTQYYENRLKALDSLKATGV---NPYPHKF 105


>02_05_0003 -
           24867053-24867145,24867264-24867437,24867673-24867735,
           24868108-24868198,24869579-24869673,24870471-24870668,
           24871475-24871648,24872335-24872439,24872645-24872737,
           24873688-24873690,24874776-24874844,24875208-24875265,
           24875810-24875918,24876603-24876714,24877992-24878204,
           24878214-24878546
          Length = 660

 Score = 68.5 bits (160), Expect = 5e-12
 Identities = 30/71 (42%), Positives = 49/71 (69%)
 Frame = +2

Query: 521 KTKKGELSIIPKNIKLLAPCLHMLPHLHFGLKDKETRFRKRYLDLILNDKVRQIFYTRAK 700
           KT+KGELS+  KN ++L   L  LP  + GL D + R+R+RY+D+I N +V  +F TRAK
Sbjct: 216 KTEKGELSVYVKNFEILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRTRAK 275

Query: 701 IIAYVRRFLDN 733
            ++ +R+ +++
Sbjct: 276 AVSEIRKTMES 286



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 28/78 (35%), Positives = 45/78 (57%)
 Frame = +3

Query: 270 EEFIEKYQNLNNGDVLENVTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYET 449
           +E  + Y +L NG+V  +V +S+AGR+ + R  G KL+F  +R +   IQ+    K   T
Sbjct: 134 KELQDGYTHLENGEVCADVAVSIAGRIVARRAFG-KLVFMTVRDDSGTIQLYCE-KDSLT 191

Query: 450 EDKFFKDTDKLRRGDIIG 503
           E++F +    +  GDIIG
Sbjct: 192 EEQFEQLKTIIDIGDIIG 209


>03_05_0167 -
           21448714-21448846,21449748-21449870,21450024-21450302,
           21450389-21450672,21450737-21450964,21452937-21453110,
           21453198-21453732,21453779-21453840,21453908-21454231,
           21454664-21455093,21457033-21457268,21457355-21457414,
           21457495-21457628,21457884-21458010,21458239-21458337,
           21458414-21458513,21458601-21458671,21459101-21459172,
           21459656-21459787,21460512-21460670
          Length = 1253

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 151 EEEISPNEYYKLRSGAVAALKNGLKEDH 234
           EE+++P +    R G+V   K  LK DH
Sbjct: 5   EEQVAPEQVISTRGGSVLGKKTILKSDH 32


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,518,276
Number of Sequences: 37544
Number of extensions: 296989
Number of successful extensions: 613
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)