Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0656
         (735 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D32053-1|BAA22084.1|  597|Homo sapiens Lysyl tRNA Synthetase pro...   129   1e-29
D31890-1|BAA06688.1|  601|Homo sapiens KIAA0070 protein.              129   1e-29
BC004132-1|AAH04132.1|  597|Homo sapiens lysyl-tRNA synthetase p...   129   1e-29
AF285758-1|AAG30114.1|  625|Homo sapiens lysyl-tRNA synthetase p...   129   1e-29
AK126584-1|BAC86604.1|  423|Homo sapiens protein ( Homo sapiens ...    78   4e-14

>D32053-1|BAA22084.1|  597|Homo sapiens Lysyl tRNA Synthetase
           protein.
          Length = 597

 Score =  129 bits (311), Expect = 1e-29
 Identities = 59/74 (79%), Positives = 65/74 (87%)
 Frame = +2

Query: 509 GHPGKTKKGELSIIPKNIKLLAPCLHMLPHLHFGLKDKETRFRKRYLDLILNDKVRQIFY 688
           G+PGKTKKGELSIIP  I LL+PCLHMLPHLHFGLKDKETR+R+RYLDLILND VRQ F 
Sbjct: 186 GNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFI 245

Query: 689 TRAKIIAYVRRFLD 730
            R+KII Y+R FLD
Sbjct: 246 IRSKIITYIRSFLD 259



 Score =  103 bits (248), Expect = 5e-22
 Identities = 49/89 (55%), Positives = 65/89 (73%)
 Frame = +3

Query: 267 LEEFIEKYQNLNNGDVLENVTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYE 446
           L +FI+KY +L  GD L ++TL VAGR+H+ R SG KLIFYDLR EG K+QVMAN++ Y+
Sbjct: 105 LTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYK 164

Query: 447 TEDKFFKDTDKLRRGDIIGCVAIQVKLRK 533
           +E++F    +KLRRGDIIG      K +K
Sbjct: 165 SEEEFIHINNKLRRGDIIGVQGNPGKTKK 193



 Score = 44.0 bits (99), Expect = 6e-04
 Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = +1

Query: 148 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKF 252
           +EE + PN+YYK+RS A+  LK NG  ED PYPHKF
Sbjct: 67  EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKF 99


>D31890-1|BAA06688.1|  601|Homo sapiens KIAA0070 protein.
          Length = 601

 Score =  129 bits (311), Expect = 1e-29
 Identities = 59/74 (79%), Positives = 65/74 (87%)
 Frame = +2

Query: 509 GHPGKTKKGELSIIPKNIKLLAPCLHMLPHLHFGLKDKETRFRKRYLDLILNDKVRQIFY 688
           G+PGKTKKGELSIIP  I LL+PCLHMLPHLHFGLKDKETR+R+RYLDLILND VRQ F 
Sbjct: 190 GNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFI 249

Query: 689 TRAKIIAYVRRFLD 730
            R+KII Y+R FLD
Sbjct: 250 IRSKIITYIRSFLD 263



 Score =  103 bits (248), Expect = 5e-22
 Identities = 49/89 (55%), Positives = 65/89 (73%)
 Frame = +3

Query: 267 LEEFIEKYQNLNNGDVLENVTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYE 446
           L +FI+KY +L  GD L ++TL VAGR+H+ R SG KLIFYDLR EG K+QVMAN++ Y+
Sbjct: 109 LTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYK 168

Query: 447 TEDKFFKDTDKLRRGDIIGCVAIQVKLRK 533
           +E++F    +KLRRGDIIG      K +K
Sbjct: 169 SEEEFIHINNKLRRGDIIGVQGNPGKTKK 197



 Score = 44.0 bits (99), Expect = 6e-04
 Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = +1

Query: 148 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKF 252
           +EE + PN+YYK+RS A+  LK NG  ED PYPHKF
Sbjct: 71  EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKF 103


>BC004132-1|AAH04132.1|  597|Homo sapiens lysyl-tRNA synthetase
           protein.
          Length = 597

 Score =  129 bits (311), Expect = 1e-29
 Identities = 59/74 (79%), Positives = 65/74 (87%)
 Frame = +2

Query: 509 GHPGKTKKGELSIIPKNIKLLAPCLHMLPHLHFGLKDKETRFRKRYLDLILNDKVRQIFY 688
           G+PGKTKKGELSIIP  I LL+PCLHMLPHLHFGLKDKETR+R+RYLDLILND VRQ F 
Sbjct: 186 GNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFI 245

Query: 689 TRAKIIAYVRRFLD 730
            R+KII Y+R FLD
Sbjct: 246 IRSKIITYIRSFLD 259



 Score =  103 bits (248), Expect = 5e-22
 Identities = 49/89 (55%), Positives = 65/89 (73%)
 Frame = +3

Query: 267 LEEFIEKYQNLNNGDVLENVTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYE 446
           L +FI+KY +L  GD L ++TL VAGR+H+ R SG KLIFYDLR EG K+QVMAN++ Y+
Sbjct: 105 LTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYK 164

Query: 447 TEDKFFKDTDKLRRGDIIGCVAIQVKLRK 533
           +E++F    +KLRRGDIIG      K +K
Sbjct: 165 SEEEFIHINNKLRRGDIIGVQGNPGKTKK 193



 Score = 44.0 bits (99), Expect = 6e-04
 Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = +1

Query: 148 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKF 252
           +EE + PN+YYK+RS A+  LK NG  ED PYPHKF
Sbjct: 67  EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKF 99


>AF285758-1|AAG30114.1|  625|Homo sapiens lysyl-tRNA synthetase
           protein.
          Length = 625

 Score =  129 bits (311), Expect = 1e-29
 Identities = 59/74 (79%), Positives = 65/74 (87%)
 Frame = +2

Query: 509 GHPGKTKKGELSIIPKNIKLLAPCLHMLPHLHFGLKDKETRFRKRYLDLILNDKVRQIFY 688
           G+PGKTKKGELSIIP  I LL+PCLHMLPHLHFGLKDKETR+R+RYLDLILND VRQ F 
Sbjct: 214 GNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFI 273

Query: 689 TRAKIIAYVRRFLD 730
            R+KII Y+R FLD
Sbjct: 274 IRSKIITYIRSFLD 287



 Score =  103 bits (248), Expect = 5e-22
 Identities = 49/89 (55%), Positives = 65/89 (73%)
 Frame = +3

Query: 267 LEEFIEKYQNLNNGDVLENVTLSVAGRVHSIRESGAKLIFYDLRAEGAKIQVMANAKLYE 446
           L +FI+KY +L  GD L ++TL VAGR+H+ R SG KLIFYDLR EG K+QVMAN++ Y+
Sbjct: 133 LTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYK 192

Query: 447 TEDKFFKDTDKLRRGDIIGCVAIQVKLRK 533
           +E++F    +KLRRGDIIG      K +K
Sbjct: 193 SEEEFIHINNKLRRGDIIGVQGNPGKTKK 221



 Score = 44.0 bits (99), Expect = 6e-04
 Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = +1

Query: 148 QEEEISPNEYYKLRSGAVAALK-NGLKEDHPYPHKF 252
           +EE + PN+YYK+RS A+  LK NG  ED PYPHKF
Sbjct: 95  EEESVDPNQYYKIRSQAIHQLKVNG--ED-PYPHKF 127


>AK126584-1|BAC86604.1|  423|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44621 fis, clone BRACE2016896, highly  similar
           to Lysyl-tRNA synthetase (EC 6.1.1.6). ).
          Length = 423

 Score = 77.8 bits (183), Expect = 4e-14
 Identities = 35/45 (77%), Positives = 39/45 (86%)
 Frame = +2

Query: 596 HLHFGLKDKETRFRKRYLDLILNDKVRQIFYTRAKIIAYVRRFLD 730
           HLHFGLKDKETR+R+RYLDLILND VRQ F  R+KII Y+R FLD
Sbjct: 85  HLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLD 129



 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +1

Query: 148 QEEEISPNEYYKLRSGAVAALKNGLKE 228
           +EE + PN+YYK+RS A+  L  GLK+
Sbjct: 67  EEESVDPNQYYKIRSQAI-HLHFGLKD 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,589,859
Number of Sequences: 237096
Number of extensions: 1659635
Number of successful extensions: 6585
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6581
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)