Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0655
         (702 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,731...    30   1.5  

>12_01_0798 +
           7314885-7314953,7315324-7315387,7315489-7315677,
           7316430-7316625,7316727-7316953,7317177-7318134,
           7320104-7321307,7321517-7321876,7321965-7323195,
           7323334-7323599,7323738-7326335
          Length = 2453

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -3

Query: 229 DLNGVHVNAESAESKTRLTLSPTSIAYPLHLLCIH 125
           DLN +H+  E+ E+ TR T +   ++YP+  + +H
Sbjct: 132 DLNTLHLIKENGEALTRRTSNQLKLSYPIVNIVVH 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,703,096
Number of Sequences: 37544
Number of extensions: 246449
Number of successful extensions: 450
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)