Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0654
(797 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 58 1e-09
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 37 0.004
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 34 0.027
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 31 0.14
SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr... 29 0.77
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 29 0.77
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 28 1.8
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 27 2.4
SPBP16F5.02 |mcs2||cyclin Mcs2|Schizosaccharomyces pombe|chr 2||... 27 2.4
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.1
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 27 3.1
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 27 4.1
SPCC1739.10 |mug33||conserved fungal protein|Schizosaccharomyces... 26 7.2
SPAC23H4.08 |||RNA polymerase II associated protein |Schizosacch... 25 9.5
SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyc... 25 9.5
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 25 9.5
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 58.0 bits (134), Expect = 1e-09
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +1
Query: 379 REEKLRFAFSMYDLDSDGKISRDELLAILHMMVGANISEEQLTILLNE 522
+EEKL+FAF +YD+D DG IS EL +L MMVG N+ E+QL ++++
Sbjct: 91 KEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDK 138
Score = 45.6 bits (103), Expect = 8e-06
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 128 TGFTPNQIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLTREL 265
+ F+ +IER+ RF +D N G++ R +FL IP +A NPL L
Sbjct: 16 SSFSNEEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNPLASRL 61
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 510 IAERTIIEADTNNDQMISFEEFCRALERTDVEQKMSI 620
I ++TI+E D + D ISFEEF + ++V M++
Sbjct: 135 IVDKTIMEVDKDRDGKISFEEFKDIVSGSNVTSSMTL 171
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 36.7 bits (81), Expect = 0.004
Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
Frame = +1
Query: 385 EKLRFAFSMYDLDSDGKISRDELLAI---LHMMVGANI 489
+KL +AF +YDLD++G IS DE+L I ++ MVG+ +
Sbjct: 99 DKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMV 136
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 33.9 bits (74), Expect = 0.027
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +1
Query: 385 EKLRFAFSMYDLDSDGKISRDELLAILHMMVGANISEEQLTILLNE 522
++++ AF +YD+D DG I + ++L + G N+++ +L L NE
Sbjct: 9 DEMKEAFVLYDIDKDGLIPTSHVGSVLRSL-GINVTDAELAKLSNE 53
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 388 KLRFAFSMYDLDSDGKISRDELLAILHMMVGANISEEQLTILLNE 522
+ R AFS++D D DG I+ +EL ++ + G + + +L ++NE
Sbjct: 13 EFREAFSLFDRDQDGNITSNELGVVMRSL-GQSPTAAELQDMINE 56
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 504 DDIAERTIIEADTNNDQMISFEEFCRAL 587
+++A+ I EADT+ D +I++EEF R +
Sbjct: 121 EEVADM-IREADTDGDGVINYEEFSRVI 147
>SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 29.1 bits (62), Expect = 0.77
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = -3
Query: 363 FPILLDGP-KVCKNPHELQEVNSVIVAFSKE*LHNSLVSGLIANS--GILRKSSRDNVPQ 193
F + DGP C L S I AFS + NSL + L+ N+ G+ + ++
Sbjct: 155 FGVHHDGPFDPCSKHRNLDAATSPIAAFSSQSEANSLPAFLLPNNSKGVEKSEENEDGVT 214
Query: 192 SFLSSDVNRE*RRSI*LGVNPVSSCICAISSSLNNKDD 79
SS+VN S NP +C+ + +N ++
Sbjct: 215 DNDSSNVNSSTNES----PNPTDINVCSNDDATDNTEN 248
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 29.1 bits (62), Expect = 0.77
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 358 RENKLNCREEKLRFAFSMYDLDSDGKISRDELLAIL 465
+E N +++L +DLD DG+I+ E +AI+
Sbjct: 137 KELNENIDDQELEAMIEEFDLDQDGEINEQEFIAIM 172
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/51 (21%), Positives = 25/51 (49%)
Frame = +2
Query: 605 TKDVHSIPQLTSKLLNRVHQVHSDNCTNSHCLWALQEKMNHLCETCTYLLN 757
T+ S+ +++ + +VH D + L Q+K ++LC+ Y ++
Sbjct: 115 TRYAASLKDKKKMIVSGIEKVHKDKLSKHQALVKAQDKYHYLCKKVNYYVS 165
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 27.5 bits (58), Expect = 2.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 77 KSSLLLREEEIAQIQEETGFTPNQIERLYSRFTSLDKND-CGTLSREDFLRIPELAINPL 253
+S L +EE++ + T N+I R Y T L KN+ + S E+ +R + L
Sbjct: 469 ESQLREKEEDLIRANRLKQDTLNEISRTYQELTFLQKNNPTYSQSMENLIREAQETYQQL 528
Query: 254 TREL 265
++ L
Sbjct: 529 SKRL 532
>SPBP16F5.02 |mcs2||cyclin Mcs2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 322
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 546 NDQMISFEEFCRALERTDVEQKMSIRF 626
ND IS E+FC+ + +T E+ + F
Sbjct: 127 NDHYISIEQFCKNMPKTTPEEVLEYEF 153
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 3.1
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 277 FAESHDDR--VNF-LQFMRVLAHFRPIKKNRENKLNCREEKLRFAFSMYDLDSDGKISRD 447
+ ++HDD +++ L+ +V A R I KL +++ F + DL++ K+SR
Sbjct: 324 YIDTHDDEKILSYSLKPNQVFAFLRSILVRVFPKLIWGNQRI-FEIILKDLETFLKLSRY 382
Query: 448 ELLAILHMMVGANISEEQLTILLNEQSLKRTLT 546
E ++ ++M ISE + +L + K L+
Sbjct: 383 ESFSLHYLMSNIKISEIEWLVLGKRSNAKMCLS 415
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 137 TPNQIERLYSRFTSLDKNDCGTLSRED 217
T +QI+ L F LDK+ G + RED
Sbjct: 43 TSSQIQELKEAFALLDKDGDGNIGRED 69
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -3
Query: 489 NIGSNHHVQYSEEFISGYFTITVQIIHRKCKPQFFFSAIEFIFPILL 349
N SN ++Y+E+F +G F I+ +I H +F ++ +F ++L
Sbjct: 512 NRKSNVKIEYTEDFATG-FAISGEISHSINNLEFVLYSLSSLFLMML 557
>SPCC1739.10 |mug33||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 336
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 207 DNVPQSFLSSDVNRE*RRSI*LGVNPVSSCICAISS 100
++ F +S + R+ R S L + PVS+CIC IS+
Sbjct: 68 EHAKDGFRTSVIVRQ-RASYGLVIVPVSACICLIST 102
>SPAC23H4.08 |||RNA polymerase II associated protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 683 YNCQNVLDVRGSRVWRSIEESNGHLLFHIGP 591
Y QN+ + +RV+ +I GH +H P
Sbjct: 126 YTIQNLPSTQSNRVFDAIRVEQGHTTYHPHP 156
>SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 313
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 401 HFLCMIWTVMVKYPEMNSSLYCT*WLEP 484
HF C I T+ YP +N L W P
Sbjct: 247 HFKCNIGTIRHNYPHINQWLKRLYWKHP 274
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +1
Query: 283 ESHDDRVNFLQFMRVLAHFRPIKKNRENKLNCREEKLRFAFSMYDLD 423
E H++R+ F+ F++ P+K+ ++ +FS Y +D
Sbjct: 423 EEHEERLCFIDFIKQFLELNPLKRWTPDQAKNHPFITGASFSQYCID 469
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,335,101
Number of Sequences: 5004
Number of extensions: 71364
Number of successful extensions: 264
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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