Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0652
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 144 1e-35
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 144 1e-35
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 77 3e-15
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 64 2e-11
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 46 4e-06
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 38 0.001
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 30 0.25
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 29 0.44
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 29 0.76
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 29 0.76
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 28 1.3
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.3
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 27 1.8
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 27 2.3
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 27 3.1
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 27 3.1
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 27 3.1
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 26 4.1
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 26 4.1
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 4.1
SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual 25 7.1
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 25 9.4
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 144 bits (348), Expect = 1e-35
Identities = 71/90 (78%), Positives = 78/90 (86%)
Frame = +1
Query: 1 VGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDP 180
VGVDQFLVK+GT+TT + AHNMKVMKFSVSPVV+VAVE KN DLPKLVEGLKRL+KSDP
Sbjct: 457 VGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGLKRLSKSDP 516
Query: 181 MVQCINEESGEQIVAGAGELHLEICLRILR 270
V C ESGE IVAGAGELHLEICL+ L+
Sbjct: 517 CVLCTTSESGEHIVAGAGELHLEICLKDLQ 546
Score = 113 bits (271), Expect = 3e-26
Identities = 52/97 (53%), Positives = 68/97 (70%)
Frame = +3
Query: 255 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDI 434
LKDL+EDHA IP+K S PVVSYRE+V+E S LSKSPNKHNR+FM A+PM + L I
Sbjct: 542 LKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAI 601
Query: 435 DEGRVNPRDDFKTRARYLTEKYEYELPKPVRFGALAP 545
+ G VNPRDDFK RAR + +++ +++ + P
Sbjct: 602 ETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGP 638
Score = 77.8 bits (183), Expect = 1e-15
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +2
Query: 509 VTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAK 646
VT+ARKIWCFGP+ TG N++VD +K V YLNEIKDSVVA F WA+K
Sbjct: 627 VTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASK 672
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 144 bits (348), Expect = 1e-35
Identities = 71/90 (78%), Positives = 78/90 (86%)
Frame = +1
Query: 1 VGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDP 180
VGVDQFLVK+GT+TT + AHNMKVMKFSVSPVV+VAVE KN DLPKLVEGLKRL+KSDP
Sbjct: 457 VGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGLKRLSKSDP 516
Query: 181 MVQCINEESGEQIVAGAGELHLEICLRILR 270
V C ESGE IVAGAGELHLEICL+ L+
Sbjct: 517 CVLCTTSESGEHIVAGAGELHLEICLKDLQ 546
Score = 113 bits (271), Expect = 3e-26
Identities = 52/97 (53%), Positives = 68/97 (70%)
Frame = +3
Query: 255 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDI 434
LKDL+EDHA IP+K S PVVSYRE+V+E S LSKSPNKHNR+FM A+PM + L I
Sbjct: 542 LKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAI 601
Query: 435 DEGRVNPRDDFKTRARYLTEKYEYELPKPVRFGALAP 545
+ G VNPRDDFK RAR + +++ +++ + P
Sbjct: 602 ETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGP 638
Score = 77.8 bits (183), Expect = 1e-15
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +2
Query: 509 VTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAK 646
VT+ARKIWCFGP+ TG N++VD +K V YLNEIKDSVVA F WA+K
Sbjct: 627 VTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASK 672
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 76.6 bits (180), Expect = 3e-15
Identities = 37/89 (41%), Positives = 57/89 (64%)
Frame = +1
Query: 4 GVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPM 183
G+ +++T T+ + N N+ + + P+VRVA+EP P ++ KLV GL L ++DP
Sbjct: 533 GLAGTVLRTATLCSSPNGPNLVGVTQQMEPIVRVALEPVRPFEMNKLVTGLDMLNQADPC 592
Query: 184 VQCINEESGEQIVAGAGELHLEICLRILR 270
VQ EE+GE ++ AGE+HLE CL+ LR
Sbjct: 593 VQIAVEENGEHVIMCAGEIHLERCLKDLR 621
Score = 33.9 bits (74), Expect = 0.020
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +3
Query: 255 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSK 365
LKDL E A I I+ S P+V YRET D L +K
Sbjct: 617 LKDLRERFAKIEIQASQPLVPYRETTIATPDLLAKNK 653
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 527 IWCFGPEGTGPNILVDCSK 583
I FGP+ GPNIL D +K
Sbjct: 751 IIAFGPKRVGPNILFDKTK 769
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 63.7 bits (148), Expect = 2e-11
Identities = 31/87 (35%), Positives = 49/87 (56%)
Frame = +3
Query: 252 LLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPED 431
LL DL ++ I I+ SDPV + ET + S C S +PNK NR+ M +P+ G+ D
Sbjct: 653 LLYDLRTLYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISND 712
Query: 432 IDEGRVNPRDDFKTRARYLTEKYEYEL 512
I+ G+VN K + + + Y+++L
Sbjct: 713 IENGKVNINWPQKRISEFFQKNYDWDL 739
Score = 63.3 bits (147), Expect = 3e-11
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = +1
Query: 4 GVDQFLVKTGTITTFK---NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKS 174
GVD + KT TI + + + + + V +VAVEP NP++LPKL++GL++ KS
Sbjct: 567 GVDNSISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPHNPSELPKLLDGLRKTNKS 626
Query: 175 DPMVQCINEESGEQIVAGAGELHLEICLRILR 270
P+ EESGE + G GE++++ L LR
Sbjct: 627 YPLSITKVEESGEHTIFGTGEMYMDCLLYDLR 658
Score = 39.5 bits (88), Expect = 4e-04
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +2
Query: 518 ARKIWCFGPEGTGPNILVDCSKGV----QYLNEIKDSVVAGFQWAAK 646
+R IW FGP+ G NIL D + LN +K+ + GFQW +
Sbjct: 742 SRSIWAFGPDDRGTNILRDDTLSTDVDKNVLNSVKEYIKQGFQWGTR 788
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 46.4 bits (105), Expect = 4e-06
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 TITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESG 210
T T ++ M M F PV+ ++++PK+ D + L R + DP + ++ ES
Sbjct: 456 TFTDGSVSYTMTSM-FVPEPVISLSLKPKSK-DTTSFSKALNRFQREDPTFRVQLDNESK 513
Query: 211 EQIVAGAGELHLEICLRILRR 273
E I++G GELHLE+ + +RR
Sbjct: 514 ETIISGMGELHLEVYVERMRR 534
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 91 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINE-ESGEQIVAGAGELHLEI 252
PV ++EP + D P L+E L + + DP + + E+G+ ++ G G +HL++
Sbjct: 443 PVCIASIEPYSLKDEPALLEALANMNREDPSFRYTQDLENGQLLIQGMGIMHLQV 497
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 30.3 bits (65), Expect = 0.25
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 255 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 413
+K LEE+ + +K SD V + ++ + P +++FM PMP
Sbjct: 287 VKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKIFMDTPPMP 339
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 29.5 bits (63), Expect = 0.44
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +1
Query: 124 PADLPKLVEGLKRLAKSD--PMVQCINEESGEQIVA----GAGELHLEI 252
P D+ KL EGL++L + D +VQ +NE + GE H+++
Sbjct: 172 PVDMDKLAEGLQKLQEDDLLQVVQMVNENKTPDMYVRNDIEGGEFHIDL 220
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 28.7 bits (61), Expect = 0.76
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 455 PR*LQDSRSVSYRKVRI*VTEARKIWCFGPEGTGPNILVDCSKG--VQYL--NEIKDSVV 622
PR L ++ + Y +V + T ++IW P NIL+ S G VQYL +E +S
Sbjct: 368 PRFLGETELIFYAEVELSNTTNQQIWAKPPISLDFNILMFTSSGLHVQYLRVSEPSNSKY 427
Query: 623 AGFQW 637
+W
Sbjct: 428 KSIKW 432
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 28.7 bits (61), Expect = 0.76
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +3
Query: 405 PMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYELPKPVRFGALAPRVPAP 560
P LP+ +D V + T A+ T PKPVR ++P P
Sbjct: 594 PSSKQLPQSVDGKTVTANANSTTVAKQPTSNVALTRPKPVRTATSQSKIPKP 645
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 1 VGVDQFLVKTGTITTFKNAHNMKV--MKFSVSP 93
+GVD F K G + +K+ N+K+ +K+ V+P
Sbjct: 404 MGVDDFEEKPGVLANWKSVKNLKLLSLKYDVTP 436
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 27.9 bits (59), Expect = 1.3
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 390 FMKAQPMPDGLPEDIDEGRVNPRDDFKT-RARYLTEKYEYELPKPVRFGALAPRVPAPTS 566
F KA P+ D +DE +VN + ++ +A T + +PK R+ LA + P+ ++
Sbjct: 422 FTKATPLKDNESASVDESKVNVLSENQSLQADTATLEQLTPIPK-ARWNQLANKHPSLSN 480
Query: 567 WWIAPKESSTSMK 605
+P SS ++
Sbjct: 481 SAASPPVSSPGLR 493
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 470 DSRSVSYRKVR--I*VTEARKIWCFGPEGTGPNILVD--CSKGVQYLNE 604
D ++ Y+ VR I + E + GP G+G ++LVD S+ Q +NE
Sbjct: 557 DEQTKLYQWVRQTIVLGEGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +2
Query: 497 VRI*VTEARKIWCFGPEGTGPNIL---VDCSKGVQYLNEIKDSVV 622
+R+ + + + +GP GTG +L V S GV +L + ++V
Sbjct: 159 LRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIV 203
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -1
Query: 239 SSPAPATICSPDSSL--IHCTMGSDLARRLRPS 147
S+ +P+TICSPD+++ ++ G L ++ P+
Sbjct: 403 SNVSPSTICSPDNNVTFVNLAPGEKLTFKIEPN 435
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 10 DQFLVKTGTITTFKNAHNMKVMKFSVSPVV 99
D FLVK G + ++ +N+ FSVS +V
Sbjct: 82 DTFLVKYGDLINIQDPYNLNKTLFSVSDLV 111
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +3
Query: 273 DHACI-PIKKSDPVVSYRETVAEESDQLC---LSKSPNKHNRLFMKAQPMPDGL 422
+ C+ +KK + V R + + + ++KS KHN+L K +P+P L
Sbjct: 211 EFTCVRDLKKLEKKVKKRSDLGNKYESTLNSLINKSVKKHNKLVKKHKPLPSTL 264
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 420 LPEDIDEGRVNPRDDFKT 473
LPE IDEG+++ DD KT
Sbjct: 194 LPEKIDEGKLSDVDDGKT 211
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 459 DDFKTRARYLTEKYEYELPKPVRFGALA 542
D F A+Y+TE + YE+ P+ GA A
Sbjct: 91 DKFGPFAKYITEYFGYEMVIPMNTGAEA 118
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -1
Query: 422 QTIRHGLSLHEQTVVLVGRL*E 357
+++RH +SL+E+T + +GRL E
Sbjct: 324 ESVRHLISLNEETWIQIGRLAE 345
>SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 157 KRLAKSDPMVQCINEESGEQIVAGAGEL 240
KR A + +V C+NE E+ +A A EL
Sbjct: 83 KRAAIAQQLVNCVNELFYEEALARAAEL 110
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 321 RETVAEESDQLCLSKSPNKHNRLFMKAQP 407
R T EE + L+KSP+ HNR+ P
Sbjct: 466 RLTDDEEREIRALAKSPDIHNRIIASMAP 494
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,834,844
Number of Sequences: 5004
Number of extensions: 60207
Number of successful extensions: 204
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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